Sardina pilchardus (sardine): 134095547
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Entry
134095547 CDS
T10667
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134095547 (irx5a)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134095547 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PGA2
Motif
Other DBs
NCBI-GeneID:
134095547
NCBI-ProteinID:
XP_062405139
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Position
11:complement(24055835..24059294)
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AA seq
446 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTTASPG
YNSHLPYSADAAAAATFTSYVSSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPSDKGDSTDTESDNKLINPGDICDRFKDESHVKEMD
PLLTNTELKESEDRTELLPESAKPTTSSPSTVPRGNEIIAQEKPSDLGHAPSTVNSNVTS
VIHSPPSAPKPKLWSLAEIATSSDRCKGSSEGPQATVMGQSTVIATNAASPSRSSSQCPL
PNSTVLSRPIYYTSPFYPGYTNYGTFGHLHSNHGSNTGSTPHFNGLNQTVLNRAEALVRE
SKLRSQTQVDLCKDSPYELKKGMSNI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggttacttgtatcagccatccgcttccctggcactgtattcatgt
ccggcgtacagtaccagcgtgatttcgggaccccgaacggaggaacttggaagatcatcc
tcggggtctgcttttgctccgtatgccggatctaccgcgtttaccaccgcttcgcctggc
tacaattcccatctgccgtacagtgcagacgcggcggcggctgccacctttacttcatat
gtgagttcgccctacgatcacacctccggcatggctggttcgataggctatcacccgtac
gctgctcccttgggttcctatccgtatggtgaccctgcttaccgaaagaacgcgactcgg
gatgccaccgccacactcaaagcgtggctcaacgagcaccggaaaaacccgtaccccacc
aagggtgaaaagatcatgctggccattatcaccaaaatgaccctcactcaagtgtccacc
tggttcgccaacgccaggaggaggctaaagaaagaaaacaagatgacctggacacctcgg
aaccggagcgaggacgaggaagaggatgagaacattgatctggagaaaaacgacgacgac
gagcctaacaagccttcagacaagggagactcgacagatactgagtcggacaataaactg
ataaacccaggggacatttgcgacagattcaaagatgaaagtcatgtgaaggaaatggat
cctcttttaaccaacacggaattaaaagagtcagaggaccggacggaactgctgcccgag
tcggctaagcccaccacctcctccccgtctactgtgcctcgggggaatgagatcattgcg
caagagaagccgtcagatttgggccacgcaccgagcacagtgaacagcaacgtgacgtct
gttatccattcgcccccgtcagcccccaaaccgaaactttggtctctagccgagatcgcg
acatcctcagacaggtgtaaaggcagcagcgagggcccgcaggccacggtgatgggtcaa
agcacagtaatcgcgaccaacgctgcgtcgccatctcgatcatcgtcccaatgtcccctc
ccaaatagcacggttctctccaggcccatctactacacctcccccttttaccccggttat
acgaactatggcacttttggacatcttcacagcaatcacggatccaacacgggctctacg
ccacacttcaatggattaaaccagactgtgttaaacagggccgaggctctggtaagagag
agcaaactcagaagccaaacacaggtagatctttgtaaagactccccttatgaactaaag
aaaggtatgtcaaacatttaa
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