Sardina pilchardus (sardine): 134095625
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Entry
134095625 CDS
T10667
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134095625 (lingo2)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134095625 (lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRRNT
LRR_EndoS
LRR_9
LRR_LRWD1
LRR_6
V-set
LRR_Zer-1
LRR_RPS2
C2-set_2
Ig_6
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
134095625
NCBI-ProteinID:
XP_062405244
LinkDB
All DBs
Position
11:5636192..5896325
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AA seq
614 aa
AA seq
DB search
MVDCMSRVMLHSALSCWHPLLGVALVVVFAGSALGCPARCDCSAQSRSVLCHRKRLTAIP
DGIPIETRVLDLSKNRIHAINPDDFAAYPQLEELDLSGNNIIYVEPGAFNMLFNMHSLSL
KSNRIKLLSQGVFTGMTNLTVLDISDNKIVILLDYMFQDLRNLRSLEVGDNDLVYISHWA
FSGLLGLESLTLERCNLTEVPKEALSHLHGLISLRMRYLNIGALKENSFRKLHRLQHLEI
DHWPSLDTFPASALHGLNLSTLSITNTNLTALPARALSHLTHLTHLNLSFSPIRHIGEAM
LQGLVRLEVLHLAGAHLSAIARHAFHGLSHLRLLNVSHNRLDTLEIGVFQSPEALRVLQI
DHNPLVCDCRLMWLLQKPHTLSFGEAQPECVPAEGAPRGRPYKVREALHSNHVTCVKPEI
DENKTQMVSVDEGQRALLHCSARGKPNPVVSWLTPRRQHLTRSRGRATLHDNGTLEIRPA
EAQDGGVYMCVASNTAGNDSVRVSLAVKNLGSLYANRTQFYTDAANATANGTLPSNMTFG
LDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGGSTDGT
DQGAGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgtatgagtcgagtcatgctgcacagcgccctctcgtgctggcacccgctc
ctgggtgtggcgctggtggtggtctttgcgggctccgccctgggctgcccggcccgctgc
gactgctcggcccagagccgctcggtgctgtgccaccgcaagcgcctgacggccatcccc
gacggcatccccatcgagacgcgcgtgctggacctcagcaagaaccgcatccacgccatc
aacccggacgacttcgccgcctacccgcagctggaggagctggacctgagcggcaacaac
atcatctacgtagagccgggcgcgttcaacatgctcttcaacatgcactcgctcagcctc
aagagcaaccgcatcaagctgctctcgcagggcgtcttcacaggcatgaccaacctgacc
gtgctggacatcagcgacaacaagatcgtcatcctgctcgactacatgttccaggacctt
cgcaacctgcgctcgctggaggtgggcgataatgacctggtctacatctcacactgggcc
ttcagcggcctgctggggctggagtcactgacgctggagcgctgcaatctcacggaggtc
cccaaggaggcgctgtcccacctgcatggcctgatcagcctgcgcatgcgctacttgaac
atcggtgcgctgaaggagaactccttccggaagcttcaccggctgcagcacctggagatc
gaccactggccctcgctggacaccttcccggccagcgctctgcacgggctgaacctgagc
actctgtccatcaccaacaccaacctgacagcgctgccagctcgcgcgctgagccacctg
acgcacctgacgcacctgaatctgtctttcagccccatacggcacatcggcgaggccatg
ctgcagggtctggtgcggctggaggtgctgcacctggccggggcgcacctgagcgccatc
gcgcggcacgccttccacggcctgtcccacctgcgcctgctgaacgtctcgcacaaccgg
ctggacacgctggagatcggcgtcttccagtcgcccgaggcgctgcgcgtgctccagatc
gaccacaacccgctggtgtgcgactgccgcctgatgtggctgctgcagaagccgcacacg
ctgtcgttcggcgaggcgcagcccgagtgcgtccctgcagagggcgccccccgcggccgg
ccctacaaggtcagagaggcgctgcactccaaccacgtcacctgcgtcaagcccgagatc
gacgagaacaagacccagatggtgtcggtggacgagggtcagcgcgcgctgctgcactgc
agtgcccggggcaagcccaacccggtggtgtcatggctgaccccgcgccgccagcacctg
acccgcagccgcggccgcgccacgctccacgacaacggcaccctggagatccggccggcc
gaggcgcaggacggcggcgtgtacatgtgcgtggcctccaacacggcgggcaacgactcg
gtcagggtttcgctggcggtgaaaaacctgggctcgctctatgccaacaggacccagttc
tataccgacgcagccaacgccaccgccaacggaaccttgccgtccaacatgacctttggc
ctggacctaaagaccatcctggtttccacggcgatgggctgtttcacgttcctaggcgtg
gttttgttctgctttctcctgctgtttgtctggagccggggcaaaggcaagcataaaaac
aacattgatatcgagtacgtgccccgctccaagtccaacgggggctccacagatggcacg
gatcaaggtgcaggcccacgccgtttcaacatgaagatgatctga
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