Sardina pilchardus (sardine): 134095779
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Entry
134095779 CDS
T10667
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134095779
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134095779
03037 Cilium and associated proteins [BR:
spil03037
]
134095779
Transporters [BR:
spil02000
]
Other transporters
Pores ion channels [TC:
1
]
134095779
Cilium and associated proteins [BR:
spil03037
]
Other cilia and associated proteins
Stereociliary proteins
134095779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
134095779
NCBI-ProteinID:
XP_062405444
LinkDB
All DBs
Position
11:14347513..14362914
Genome browser
AA seq
1126 aa
AA seq
DB search
MEPTTISRPLSKRHKSMRKNSRRIYSPYQDQNQGLSDDEDKDGDSNDPEEVFQNIQYQKE
LIANIRTRPWPMRRKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKLSRLLYNIVVL
FIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAGAPFGSTRS
KTIPKEHLPSAQDLDTIWSLGGYLQYSVLFYGYYGNVRKIGSAGYRLPLAYFMVGMAVFA
YSFITLLRKMAKNSRLSLASASDENYTFCWRIFCAWDYLIGNPEAAESKTAAIVNNIREA
IVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEKPELTLWEK
NEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIALLDKVN
SMSMNQIPASPANWSDSTAFLATVLQPNEDNLSTITPEITEHKNSTIATILEINRTKSTT
PVVLNHTAPYNMYNKFQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGLVVRYLS
DCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSW
AVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSQHCGPFSGQEKIY
DIISDTIANDFPLWFSRVMGYVTSPVVVLPALLLLFMLIYYLQAIARSLKYTNNQLRMQL
QTERTEDKKKVFQLAAARLQAPEGGDKKTEQESDITSMESSIRSSSPRRNGSVTNFESPV
RRGNSIRTITQSASRADVRAAAAAAAAAAIARSPAVSVRQKHRYEHIPNRHPGYLGGSSG
SCRSKSYHHVAYNPPVRYAENIHSDPLYRKSIRPMHPEAAGIVTAQSYVGRRAHTTRYVI
VNEHEPRKKLLRSTTRIPRHYRIADDPGDIVELYPRNIKRYTVRTPHRSHQPHLSEEEEE
EEAVVAGKSARRGALSQSHRPRSLSDLHQPVRFYIGDPAGSQLSMAKERGVYCRHQEDHE
EDWDEMGPHFCSRSNIKGAEPSHRHCEPHVKAKAKHKVEPSLTESDSASLASSSDQQNSS
TDQYIQVIHNKEKYLKSGGKLAKKSKSKASNDMNLSGSSELVCSNV
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaccaccatctccagacccttgtccaagcggcacaagagcatgaggaagaac
tccaggaggatttactctccgtaccaggatcagaaccaaggtctttcggacgatgaggat
aaagatggggacagcaacgatcccgaggaagtgttccagaacattcagtatcagaaggag
ctcattgccaacattcgaaccagaccttggccaatgagacggaagctcaaagccctcaag
caagccagggagatcgtgctgaagtacgaggggaggctcaccagaaccagagggtaccag
gcggccggcgccgatctgctgaaaaaactctctcgtctgctctataacattgtggttctg
ttcattccatgggaaatgagaatcaagaaaattgaaagtcactttggatcgggagtagcg
tcttattttatcttcctgcgatggctatttggaatcaatatagtcctaacgataatgacg
ggggctttcattgttctgcccgagctcctggccggagcgccgttcggaagcacccgcagc
aagaccattcccaaggagcacctcccctcggcacaggacctggacaccatctggtctctc
gggggttacctccagtactctgtgctgttttatggttactatggcaatgtgaggaagatt
gggagtgctggatacaggttgcccctggcatactttatggttggaatggctgtctttgcc
tacagtttcatcacactcctgcgaaagatggctaaaaactcgcgcctcagcctggccagt
gcgtctgatgagaactacaccttctgctggaggatcttctgcgcctgggactacctcatc
ggcaaccctgaggctgccgagagcaaaacggccgccatcgtcaacaacatcagggaggcc
attgtggaggaacaagagaaaaagaaagatacaagcctggcggttctgatcagtctgcgg
atactggcgaatatcctggtgctgctgtctctggcgggcagcatctacataatctacttt
gtcgtggatcgctctcagaaactggagcaggagaagccagagctaaccctttgggagaag
aacgaggtgagtgtggtggtatcgttgatcactatgatcgccccgtccgcctttgagctg
gtggcccagctggagatgtatcatccaaggaccagcctcaggttccagctagccagggtt
ttagtcctgtatctggggaacctctacagcctcatcattgctctgctggacaaagtaaac
agcatgagcatgaaccagatccctgctagtccggctaactggtccgactcgactgccttt
ctagccaccgtgttacagcctaatgaagacaacctgtccaccataactcctgaaatcact
gagcataagaacagcaccattgcaacaatcctcgagatcaacagaaccaaaagcaccaca
cctgtggtcctaaatcacacagccccatacaatatgtataacaagttccagcaggaccag
tgctgggagacatacgttggccaggaaatgctgaagctctccatcattgacatgatcttc
acagtagcaagcatcctgttgattgattttatccgtggtctagtggtacgatacctgagc
gactgctgttgttgggatttagagagtaagtttcctgaatatggggagttcaaaatagct
gaaaatgttctccacctgatatacaatcaaggaatgatttggatgggggcgttcttctcg
ccctgcctcccggcgtttaacgtgctcaagctgatcggactgatgtacctgcggagctgg
gccgtgctgacctgtaatgttccgcaccagcaggtgttcagggcctccaggtcaaataac
ttctacctggccatgctgctcttcatgctctttctctgcatgctgcccacgatcttcgcg
attgtccgctacagaccctcacagcactgcgggccttttagtggtcaggagaagatttat
gacatcatctcagacactatagccaacgacttccctctgtggttcagtagagtgatgggc
tacgtcacgagcccggtggtggttctgcccgctctgctgctactgttcatgctgatctac
tacctgcaggccattgcaagatccttgaaatacaccaacaaccaactgaggatgcaactt
cagacagaacggaccgaggacaagaagaaggtctttcagttggcagccgctcggctgcaa
gccccggaaggaggtgacaagaagaccgagcaggagagcgacatcaccagcatggagtcc
tccatccgttcctcgtctccccgtcgcaacggcagcgtcaccaactttgagtccccggtg
cgtcgtgggaacagcatccgcaccatcactcagtcggcctcgcgggcggacgtcagggct
gctgctgccgctgccgccgctgctgccattgcccggagcccagcggtgtctgtccggcaa
aagcacagatatgaacacatacctaacagacatccaggctatctgggaggatcaagtggc
tcctgccgttcgaagtcgtatcaccacgtggcatacaacccgcctgtgcgctacgcggag
aacatccactctgacccgctgtacaggaagagcatccggcccatgcacccagaggctgcc
gggatagtgacggcccagagctacgtggggcggcgcgcccacaccacccgctacgtcatc
gtcaacgagcacgagcctcggaagaagctgctgcgctccaccacgcgcatcccacgccac
taccgcatcgccgacgacccgggcgacatcgtggagctgtacccgaggaacatcaagcgc
tacaccgtccgcacgccgcacaggtcccaccagcctcacctgagcgaggaggaagaggag
gaggaggccgtcgtcgccggcaagagcgcccggaggggtgccctcagccagtctcaccga
ccgcggtccctgtccgacctccaccagcctgtgcgcttctacatcggagacccggcgggc
agccagctgtccatggccaaagagaggggagtgtactgccgacaccaggaggaccatgaa
gaggactgggacgagatgggcccacacttctgctcccgtagtaacataaagggcgcagag
ccctcccacagacactgtgagccccacgtgaaggccaaggccaaacataaggtggagccg
tcgctcacagagtcggattcggcctctctggcctccagcagcgaccagcagaatagtagc
actgaccagtacatccaggtcattcacaataaggagaagtacctcaaatctggtggcaaa
cttgcaaagaagtccaagtccaaagctagcaatgatatgaatttgtcaggctcgagtgaa
cttgtctgctcaaatgtatag
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