Sardina pilchardus (sardine): 134095789
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Entry
134095789 CDS
T10667
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134095789 (katnb1)
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
134095789 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
eIF2A
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_IFT122_2nd
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_NWD2_C
RMC1_N
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
134095789
NCBI-ProteinID:
XP_062405456
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All DBs
Position
11:27708907..27719062
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AA seq
688 aa
AA seq
DB search
MAAASTTKTSWRLQEMVAHSSDVSSLALGKTSGRLLATGGEDCRVNIWAVNKPNCIMSLT
GHTNPVECIQFSSSEEQVVAGSQSGSLRVWDLEAAKILRTLMGHKANICSLDFNPFGEFL
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDATIKLWDLQAGK
MITEFTSHTAAVNIVQFHPNEYLLASGSADRTIKLWDLEKFKMIGSSEGETGAVRCVAFS
PDGGCLFSGSVDTLRVYGWEPDRCFDVVPVGWGKVADLSICNNQLIGVSSSQCTVSSYVV
DLNRVKRSGSVIQGVIQDNKPLAEPPSKGATIRRNYERPITSCTGQRMKQNSESDRRSPE
GERRSPSSEDEREEKESSAEITNPDDYKEIFQPRSAISRTPPKRTEPFPAPLDDAESFPV
KPNQIDIVTPISDRAAPFNLKAQPIATSTPVLRVEPTIVATAPRSVPVVTSSVAPANRPI
VTTAKTRQQPAVIMSSRNKPIGLNVGDFLPPGGMTDEEALGQIKKGHDTMCVMLTSRCKN
LNTVRAVWGNGDIKTSLDSAVSIKDLSIVVDILNIVNLKPSLWKLDLCTSILPQIEVLLQ
SKYESYVQTGCVSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQLLNLHK
VVKNQAKQVGRHGSTFTELQLLMAPLDN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccagcactaccaagacatcctggaggctgcaggagatggtagctcacagt
agtgacgtgtcatcgctggctctggggaagacatcgggtcgcctgcttgccaccggagga
gaggactgcagagtcaacatctgggctgtcaacaaacccaactgtatcatgagtttgacc
ggccacactaacccagtagagtgcatccagttcagcagctctgaggagcaggtggtggcc
gggtcccagtctggatctctgcgtgtgtgggacctggaggcagctaagatcttgcgtact
ctgatgggacacaaggccaatatctgcagtctggacttcaacccatttggggaattcctg
gcctctgggtccatggatactaatataaagctgtgggatgtaaggagaaaaggctgtgtt
ttcagatataagggtcacactcaggcggtccgctgtctagcctttagccctgatgggaag
tggctggcctccgctagtgatgacgccactataaagctatgggacctgcaagcgggaaaa
atgatcacagaattcacctcacatacagcagcagtcaacattgttcagttccaccctaat
gagtatctactcgcctcaggtagtgcagacaggaccattaaactgtgggatctggaaaag
tttaagatgatcggctcatcggagggggaaaccggagctgtcaggtgtgtagcgttcagt
cctgatgggggctgcctattcagtggctctgtggacacgctgcgggtctatggctgggag
ccggaccgctgctttgatgtggtgccagtgggatggggcaaggtggcagacctctccatc
tgcaacaaccagctgattggtgtgtccagcagtcagtgcacagtcagctcgtacgtagtg
gatctgaaccgggtcaagcgctcgggctctgtgatccagggcgtgatccaggacaacaag
ccgctagcagagccgccatctaaaggagcaacgatccgccgcaactatgagcgcccaatc
acctcctgtacaggacagagaatgaagcagaactcggagtcggacaggcggagtccggag
ggcgagcggcgcagccccagcagtgaggacgagcgcgaggagaaggagagcagcgccgag
atcaccaaccccgacgactacaaagagatcttccagccgcgcagcgccatctctcgaaca
cctcccaaaagaactgagccttttccagccccactagacgatgctgaaagtttcccagtg
aagccaaatcagatcgacattgtgactccaatatctgatagggcagcgccttttaacctg
aaagcccagccaatagcaacatccacgcctgtcttaagggtggagccaaccatagtagcc
actgctccacgctctgttcccgtggtgacgtcgtctgttgcccccgcaaaccgacccatt
gttaccacggcgaagacgaggcagcagccagctgtaatcatgtcctctcggaacaaacca
attggactcaatgtgggagactttctgccgcctggtggaatgactgacgaggaggctttg
ggtcagattaagaaaggtcacgacacaatgtgtgtgatgttgaccagtcgctgcaagaac
ctcaacactgtacgagctgtgtggggcaatggagacatcaagacatccctcgactctgct
gtgtcaataaaggatctctcaatagtggtggacattctcaacattgtcaacctcaaaccg
tcgctatggaaactggacctgtgcacatccatcctgcctcagattgaagtgctgctgcaa
agcaaatatgagagttatgtgcagacaggatgtgtctctctgaaactgattctgaagcgc
ttctggccgctcatctcggacacactcaccgcaccaccctctgtgggagtggacatcaca
cgggaggaaaggcatcagaagtgtaaggcatgctacaagcagctgctgaacctccataaa
gttgtgaaaaatcaagcaaagcaagtgggtcgccatggtagcacttttacagaactccaa
ctactgatggctcctctggacaactga
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