Sardina pilchardus (sardine): 134095930
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Entry
134095930 CDS
T10667
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134095930 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134095930 (pitx2)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134095930 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
134095930
NCBI-ProteinID:
XP_062405625
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All DBs
Position
11:complement(8424780..8435214)
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AA seq
317 aa
AA seq
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MNSMKDPLTLEHLHHHHISGNKLTSLHHTPLAMASTLQPLQRSVDTKHRLDVHTVSDSSS
PESVEKEKGQSKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA
VWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYTYNNW
AAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSVTGVPGSSLN
SLNNLNNLSNQALNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQ
NPASNLSACQYAVDRPV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccgctgactttggaacacctacaccaccaccatatctccggg
aataaactcacttccctacaccacacgccacttgcgatggcttcaactctgcagccgttg
cagcggtcggtggacaccaagcaccggcttgacgtgcacaccgtctcggacagctctagt
ccagaatccgtagaaaaagaaaagggtcagagtaaaaatgacgactcctctgatgacccg
tccaagaagaagcggcagcgacgacagcgcacgcacttcacgagccagcaactacaggag
ctcgaggccaccttccagcggaaccgctacccggacatgtccacgcgggaggagatcgcc
gtctggacgaatctcacggaggccagagtgcgggtgtggttcaaaaatcgcagagcgaag
tggaggaaacgggagaggaaccagcaggcagagctttgcaagaacggcttcggccctcag
ttcaacggactcatgcagccctacgacgacatgtaccccggctacacatacaataattgg
gcagctaagggcctgacgtccgcttccctgtccaccaaaagcttccctttcttcaattcc
atgaatgtcaaccccctgtcctcgcagaccatgttctcccccccaaactccatctcctcc
atgagtatgacctccagtatggtcccctcggtgacgggcgtgcctggatccagtctcaac
agtctcaacaacttgaacaaccttagcaaccaagctctgaattcgggagtccccacgccg
gcgtgtccttacgctccgccgacgcctccctacgtgtaccgggacacttgcaactccagc
ctggctagcctgagactgaaggcgaagcagcattcgagttttggatatgccagtgttcag
aatccggcctccaacctcagcgcgtgccagtacgctgtggatagaccggtctaa
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integrated database retrieval system
