Sardina pilchardus (sardine): 134096060
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Entry
134096060 CDS
T10667
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134096060 (irx3a)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134096060 (irx3a)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
RE_TdeIII
MRP-S32
Motif
Other DBs
NCBI-GeneID:
134096060
NCBI-ProteinID:
XP_062405791
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All DBs
Position
11:24287679..24291059
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AA seq
452 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIASARPGTELSPSGALSNVLSTMYGSPFAAAQGYGAFLP
YSNDLSIFNQLGAQYELKDSPGIQHPGFAHHPAFYPYGQYQFGDPSRPKNATRESTSTLK
AWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRTRTDEEG
NVYSSDHEGDEGDKREDEEEIDLENIDTENIENKDDLDDQDELNADLKDGRSDSEISDGY
EDLQGADQRFLKSVVKEGKEIHVERDDPFHHHHHHHHSFEIKAPQPNGDQMKLNPASTNS
PPSENNAAPAQKPKIWSLAETATTPDNPRKSPLMNGSSAGPAAQTIIAPHRLISCPVGKI
QNWTNRAFSAHQLALLNSNHYLGLANQATANGLALYSRHAEEKSHNSDSAVTERSSALEA
EKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccacaggaccgtcag
gggatcgcaagcgcccgacccgggacagagttgagcccgtccggagctctctccaacgtt
ctctcaactatgtacggatcacctttcgctgcagcgcagggctatggagcctttcttcct
tattctaatgatctctccattttcaaccagttgggtgctcaatacgagctgaaagacagc
ccaggcatccagcaccctggctttgctcaccatccagccttctacccgtacggccagtat
cagtttggtgatccatccagacccaaaaatgcaaccagggagagcaccagcaccctgaag
gcctggctgagcgagcacaggaaaaacccgtatcctactaagggggagaagatcatgctg
gccatcatcactaaaatgaccctcactcaagtgtccacctggtttgccaacgccaggagg
aggctaaagaaggaaaacaagatgacctggaccccgaggacccgcactgatgaagaagga
aatgtttacagcagcgatcatgagggagacgagggggacaagagggaagacgaggaagaa
atcgatttagaaaatattgacacggaaaatatcgaaaacaaggatgatttggacgaccag
gacgaactgaacgccgatttgaaagacggcagaagcgattcggaaatttcggacggctat
gaggatttacagggggcagaccaaaggtttctaaaatcggtggtgaaagagggcaaggag
attcacgtggagcgggatgatcccttccaccatcaccaccaccaccaccactcatttgaa
atcaaagcgccacagccaaacggcgaccaaatgaaactcaaccccgcgtccaccaactcg
cccccgtcagaaaacaacgcggccccagctcagaaaccaaagatttggtcgctggctgag
acagctacaaccccggacaatcctagaaaatctccactaatgaatgggagctctgctggg
cctgctgcccagaccatcatcgctccacacagactcatctcatgccctgttgggaaaatc
cagaactggacaaatcgagctttctcggcccatcagcttgcgttacttaactcaaaccat
tacctcggactggcaaaccaagccacggcgaacggcctagctctgtacagcagacatgcg
gaagagaagagtcataattcagactcagctgttacagaaagatctagtgccttggaagca
gagaaaaagttgttaaaaacagccttccatccagttcaaagacggcctcagaaccaactc
gaagcggcgatggttctatccgcgctctcctcctcgtag
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