Sardina pilchardus (sardine): 134096141
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Entry
134096141 CDS
T10667
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134096141 (lingo1b)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134096141 (lingo1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
134096141
NCBI-ProteinID:
XP_062405880
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Position
11:complement(1778961..1800314)
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AA seq
623 aa
AA seq
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MTIVQVTNRMVAGEAGGPNYLVACWQPILLLMLGTVLSGSATGCPSRCECNGQERSVVCH
RRKLTALPEGVPMETRLLDLSKNRLKTINPEEFVSYPHLEELQLNENIISVIEPGAFANL
YGLRTLGLRNNKLKLIQLGVFTGLSNLTHLDISENKIVILLDYMFQDLYNLKSLEVGDND
LVFISHRAFHGLSGLEQLTIEKCNLTALPKEALSHVHNLLTLRLRHLNINAIGDYSFRRL
YRLQVLEIVHWPLLDTMTAKSLYGLNITTLSITHCNLTAVPYQAIRHLVYLRTLNLSFNP
IHTIEGNLLHHLLRLQAFHLVGGRLAAIEPYSFRGLNYLKVLNVSSNNLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPACASPESVQGKEFKDFPDILPPHY
YTCLKSKIRERKAQHKFVDEGTTVNFACQADGDPVPVIIWQTPRKQFVTVKTIGRLSVSA
DGTLEVRYAQIQDNGTYTCIASNAGGNDTRLAHLHVQSYSPNWPHQPNKTFAFISNQPSD
SGANATRGIVPFPFDVKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKTDAGESSPTEGPRKINMKMM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgtgcaggtaaccaataggatggtggcgggggaggcaggcgggcccaactac
ctggtggcgtgctggcagcccatcctgctcctgatgctgggcaccgtgctctcgggctct
gccaccggctgcccgtcgcgctgcgagtgcaacggccaggagcgctcggtcgtctgccac
cgccggaagctgaccgctctccccgagggcgtccccatggagacgcgactgttagacctc
agcaaaaaccgcctgaagaccatcaaccccgaggagttcgtcagctacccgcacctggag
gagctgcagctgaacgagaacatcatctccgtcatcgagccgggagccttcgccaatctc
tacggcttgcggacgttgggcctgcgcaacaataagctcaagctcatccagctgggggtc
tttacgggattaagcaacctgacccacctggacatcagcgagaacaagatcgtcatcctg
ctggactacatgttccaggacctgtacaacctcaagtcgctggaggtgggcgacaacgac
ctggtgttcatctcgcaccgcgccttccacggcctgagcggcctggagcagctgaccatc
gagaagtgcaacctgaccgcgctgcccaaagaggccttgagccacgtccacaacctgctg
acgctccggctgcgccacctcaacatcaacgccatcggggattactcgttccggagactc
tatcggctccaggtgctggagatcgtgcactggcctctcctggacaccatgaccgccaag
tccctctacgggcttaacatcaccaccttgtccatcacccactgcaatctcacggccgtc
ccttaccaagctatccgccacctggtgtacctccgcaccctcaatttgtcgttcaacccg
attcacacgatcgaggggaacctgctgcaccacttgctcaggctccaggccttccactta
gtcgggggcagactggctgccatcgagccttactccttcagagggctcaactatctcaaa
gttctcaacgtgtcaagcaataacctcagcactttagaggagtccgcctttcactcggtc
ggcaacctggagacgctggcgctccacgacaaccctttggcctgcgactgccgcctcctg
tgggtgttccgtcgccgctggaggctcaacttcaatcgccagcagcccgcgtgcgcctcg
cccgagtccgtgcagggcaaggagttcaaggacttccccgacatcctgccgccccactac
tacacctgcctcaagtccaagatccgggagcgcaaggcccagcacaagttcgtggacgag
ggcaccacggtcaatttcgcgtgccaggccgacggcgatcccgtcccggtgatcatctgg
cagacgccgcggaagcagttcgtcaccgtcaaaacgatcgggcgactcagcgtctccgca
gacggcaccctggaggtgcgctacgcccagatccaagacaatggcacgtacacgtgcatc
gccagcaacgcggggggaaacgacacccgcctcgcccatctgcatgtgcagagctactcc
cccaactggccccatcagccgaataaaacattcgccttcatctccaatcagcccagcgac
agtggcgccaacgccacccgaggaatagtgcccttcccgttcgacgtgaaaactctgatc
atcgccaccaccatgggatttatctcgttcctcggcgtcgtgctcttttgtctcgttctc
ctcttcctctggagcagagggaaaggcaacgccaagccaaacatcgagattgagtatgta
cctaggaagacagatgcgggtgagagcagcccgaccgaggggccccgtaaaatcaatatg
aaaatgatgtaa
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