Sardina pilchardus (sardine): 134096230
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Entry
134096230 CDS
T10667
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134096230 (tp53bp1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
RTT107_BRCT_5
DUF4537
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
134096230
NCBI-ProteinID:
XP_062405967
LinkDB
All DBs
Position
11:27294671..27314682
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AA seq
1833 aa
AA seq
DB search
MDPSGSELDSSLPQPENPCLIVEDSQPDSLAPEDDPESSYRALLTKRLSNLQPHAPSPVL
ELISSPPRDRLSQKDSQASGNHNNHSASQEPDQSLEAHESSPVFDIVTSGDTKRSDMEDV
ESGADSTTCAQTEGSMSQFGLLELSESQGFQDEPQKSDSAKTTGRNSQSQDLRRSEVSSS
SRESQRLSIQALLHSQVTEGEDLVSSQEDMFEEEEGKAGTRVDSTVNELGNRSMPTSTPA
NSLHLLHLSGQGTLVQESLSQQSVDFVAATQERMSQTPFIVPSSPTGDEPMDISKAEDNQ
SQRGEKPKGSSAVPKPRPTSTPVSQNSPGFVLDKSLSLPSQPEFSHDIFVATPSLDQPTV
RADGPSSSQTQNSPAAVKTLSTKLSPTSSPRNTPAAASPKHTPGPAKVAQAPLSTSSQAP
EMGASFQLELSSTSQPSVFFQKTQSFLEEADEDSQATQIEELATDGAAAGVDTSDAGPSR
ATSAASQSSASGGGVGTCGVRPGAGGVGREISRSQPDPHSKPTSQNVNVGRSLSQGSPNL
NRAKPSGGGVSQLGRVESTAAAKPSPSPADSGVVPPSLPTQSLSQSMLSVHSASRPVVDS
QRSQPKSQSQTQASSQAASQRLSQHSQPLSQKSQASGHSQGKGRNVPVLEEMVETDKLRE
EENENESVVGTGPGASMGLCLALSQSQNFDLEPMEEEEEDDQDQLETQQLVPGPQHIKAG
QASAGGPSSSQRSQKASQQLKEKDRGLTASQPSPGLSSPERRRRELEKSLSPGKGSLSQP
ERGSRADPGPRRSQSQLLSDSSGDIPFHFTLPKEGELIRPVVTATPPLLSQLKKTPRHST
PIEMTSFSEASEGDVTREPTMADSDIMAEESVEEPAATAAAAAEASGKLSLRMKLVTPVE
EGSSGSERFSLQKPPLSDDDGSVVKATAVAKAVASPSVFSRVREAHRQEEAEGEAQSSAV
SAPLSGGLFNSSQRRGGDSQDSESRPRPLITSTQNSQEAHQSQPLSPASQRCSVGNGTLG
RLSQQANGAASESPVKHGPTGTPQGDAGQSAQGGGAELTPPRTPLRQRAVSQQTSFDVPA
STSNTPNKSHLRAVSQQTSFDAAGAHNSSGRGLPELSPPRPPPGVRMRRHVRTTQEVRTT
VTRIITDVYYEDGREVDRKVTEESEEPVVDCRVLESDLSPSRTGSSMTSGDLADISSLSS
KASSLAHSSSGSMGTGVGSGTSTGRHPDFIMPTGRGAGKSGSPRRGRKQLQRPVSEQAKV
QGSRPLTPVTPRGRSRRGRPPSRSPQSRGGRAGANNVQRGGPFSSPEEEEERYTRVTSRG
RTATPPPGTSGRSGGSSSDSSLVGLRVVAKWSSNGYFYSGRITSDLGAGRFRLLFDDGYE
CEVQGRDVLLCDPIPTETEVTAISEDEYFLTGVVKNHKTVGRELQYCVEREGQQQWYSRA
SVILSMEQGSRLREHYGLDPSEPLTPLTKAADISLDNLVDGKRRRRGNTGPEVNTPNRSG
SPRTPGPSGKRKLMSSTEEERAEPAPAKRGRKAGPNKAGSRAAAATAVGNTSGSDAGDQR
ASHGARAGAGTGVCNTSGSGTDVPSDPSDLLASHGPLPASDSLFMGFAFLLTASSVNDRL
SNLVTSDEEEDYLPTAPYNKHYIVSQLEAGGGLVLPDFNEEQCKAAYQSLLIADQHCRTR
KYLLCVASGVPCVSNAWVRDCCLEQKLLNYRNYLLPAGMGPSQRVVEWHPRCSPFKSLRV
LLVFAGSAELWGELLKLSGATSVKQEKGQEDTDIPADTFDVMVTERSCPSAVVKRASSRS
LPVVSLEWLVQSLIVGERQDYASDPQYRHDYDL
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagtggcagcgagctggactccagtctcccgcagcccgagaacccgtgccta
atcgtagaggactcgcaacctgatagcctagctccagaggacgacccggagagcagctac
cgcgctctgctcaccaaacgcctgtccaacctacagcctcacgccccgagtcccgtcctg
gagctgatttcctctcctcctcgagaccgactttcacagaaggacagccaagccagtggg
aaccacaacaaccactccgcctctcaagagccagaccaaagcttggaggcccacgaaagc
agtccagtgtttgacattgtcacatcaggtgacaccaaaaggtctgatatggaggatgtg
gagtcaggagcagactccaccacttgtgctcagactgaagggagcatgtctcagtttggg
ttactggagctgtcagagagccagggattccaggacgagccgcagaagagtgacagtgca
aagacaacaggaaggaactctcaaagccaggatttgagaaggtctgaggtgagctccagc
agcagggagagccagaggttgagtatccaggccctgctgcactctcaagtcacagagggc
gaggacctagtgtcatctcaggaggacatgttcgaagaggaggaggggaaagcagggact
cgtgttgacagcacagtgaatgaattgggcaaccgctcaatgcccacctccaccccagcc
aacagccttcacctactccacctgtctggccagggcactttggtgcaggagagcctctcc
caacagtctgtggattttgtggcggccacacaggagaggatgagccagacccccttcata
gtgcccagctcccccactggagatgaaccaatggacatctccaaagctgaagataaccaa
tcacaaagaggagagaaacccaaaggcagcagcgctgttcccaagccacgccccacttct
accccagtatcccagaattctcctggttttgtgttggacaagagtttatctctgcccagc
caaccggagttttctcatgacatatttgtggccacccctagtctggatcagccgactgtt
cgagccgacgggccgtcctcctcccagacccagaactcccctgcagctgtgaagaccctg
tccactaaactgagccccacatcttctcctcgcaacactcctgctgctgcttcgcccaaa
cacacgcctggcccggccaaagtggcccaggcccctctgtccacctcctcccaggcccca
gagatgggagcgtccttccagctggagctctcctccaccagccagcccagcgtcttcttc
cagaagactcagagcttcctggaggaagcggacgaggacagccaggccacgcagatcgag
gagctggccacggacggggcagcagcgggggtggacaccagtgacgctgggccaagtcgt
gctaccagtgctgctagccagtctagtgcctccggtggtggagtagggacatgcggtgtg
agacccggtgctgggggcgtagggagggagatctccaggtctcagccggatccgcactcc
aagcccacctcgcagaatgtgaatgtaggccgttccctgagccagggctcgccgaacctg
aaccgtgccaaaccctcgggcggtggtgtctcccagttgggccgggtggaaagcacggcc
gccgctaagccttctcccagccctgctgattcaggggtggtgcctcctagcttgcctacc
cagtcgctctcgcagtccatgctgtctgttcactccgcttcacggcctgtcgttgacagc
cagagatcccagcccaagtcccagtcccagacccaggccagcagccaggcagcctcccag
agactgagccagcacagccaacctctgtctcagaagtcccaggcttctggccacagccaa
ggcaaagggagaaacgtgcctgtgctggaggagatggtagagaccgataaactaagggag
gaggagaatgagaacgagagtgtggttggaaccgggccgggagcctcgatgggactctgc
ctggctctctctcagagtcagaactttgacctagagcccatggaggaggaggaggaggac
gaccaggaccagctggagacccagcagctggtgcccggtcctcagcacatcaaagcgggc
caagccagcgctgggggtccctctagttcacagaggagccagaaggcgagccagcagctg
aaggagaaggacagggggctgaccgcatcacagccctctccaggcctcagcagcccagag
cggaggagaagggagctggagaagagcctgtccccagggaagggctcgctctctcagcct
gagaggggctccagagcagacccagggccccgccgctcccagtcccagctcctgagcgac
agctccggggatattcccttccactttacgctacctaaagagggggagctcatccggcct
gttgtcacggcgactcccccgctcctctcccagttgaagaagacgcccaggcacagcact
cccattgagatgacctcattctccgaggcgtcggaaggggacgtcaccagggagcccacc
atggcggacagcgacatcatggccgaggagagcgtggaagagccggccgccaccgccgcc
gccgccgccgaggcctctgggaaactgagtctgcgcatgaagctggtgaccccggtggag
gaggggagctctgggtcggagcgcttcagtctgcagaaacccccattatcagatgatgat
ggctccgttgtcaaggctaccgctgttgccaaggcagtagctagtccgtctgtgttcagc
cgtgtccgtgaggcccacaggcaggaggaggctgaaggggaggcccagtccagcgctgtc
tctgctcctctcagtggaggtttgtttaactcttcccagaggcggggcggagactctcag
gactccgagtcgagaccacgccccctgattaccagcacccagaacagccaggaagcccac
caatcgcagcccctctctcccgcgtcacagaggtgctccgtgggcaacggaaccctgggg
cggctctcccagcaggccaacggggccgcgtccgagagtccagttaagcacggccccacc
gggacgccgcagggagacgctggccaatcagcacaggggggtggggcagaactgaccccg
cccagaacccccctgagacagcgggccgtgtcccagcagaccagctttgatgtacctgcc
tctaccagcaacacacccaataagtctcacctgagggctgtttctcagcagaccagcttt
gatgcagcaggagcacacaactcatctggcagagggttaccggagctatcccctcctcgt
ccccctccgggagtacgcatgcgcaggcatgtgcgcaccacccaggaagtgcggactaca
gtcacgcgcatcatcacagacgtgtactacgaggacggacgcgaggtggaccggaaggtc
acagaggagtcggaggagcctgtggtcgactgccgcgtgctagagagtgacctctcgccc
tcgcgcacgggcagctccatgacctccggtgacctggcggacatcagctccctctcgtcc
aaagcctccagcctggcccacagcagctcgggcagcatggggacgggcgtcgggtcgggc
accagtacaggcaggcacccagacttcatcatgcccacgggccgcggggctggcaagtcc
gggagccccaggagggggcgcaagcagttgcagcggcctgtctctgagcaggccaaagtg
caggggtcgcgccctttgaccccggtcacacctcgtggccggtcacggcgaggcagaccc
ccctcacgcagccctcagagcaggggcggtcgggcgggagccaacaacgtccagcgagga
ggaccgttctcctctccagaggaggaagaggagcgctacacccgtgtcacctccaggggg
cgcaccgcaacaccccctccgggaacctccggccgctctggggggtcctcgtccgacagc
agcctggtgggtctgcgggtggtggccaagtggtcctccaacggctacttctactcgggc
cgcatcaccagcgacctgggagccggaaggttccggctgctcttcgacgacggctacgag
tgcgaggtgcagggccgagacgtgctgctgtgtgaccccatccccacggagacagaggtc
accgcaatatctgaggacgaatacttcctcactggtgtggtgaaaaaccacaagacggtg
gggagggagctgcagtactgtgtggagcgggagggccagcagcagtggtacagcagggca
tcggtcatcctctccatggagcagggcagccggctgagggagcactacggcctggacccc
tccgagcccctcacccccctcaccaaggcggccgacatcagtctggataatctggtggat
gggaagcggcgtcgccgtggcaacacggggccagaagtcaacacgccaaatcggagcggc
agcccacggacccccgggccttctgggaagaggaagctgatgagctccactgaggaggag
cgtgcagagccagcacccgccaaaagagggcgcaaggctggccccaacaaagccggttcg
cgtgctgctgcagctacggctgtgggcaacacctcgggaagtgatgctggtgaccagcgg
gccagccacggtgcacgtgcgggtgcaggtacgggcgtgtgcaacacctcgggcagcggc
acagacgtgccctctgaccccagtgacctgctggcgagccacgggccgctccccgccagc
gactccctgttcatgggcttcgccttcctgctcacggcctcctcggtgaacgaccgcctc
tccaacctggtcaccagcgacgaggaggaagactacctgccgacagctccctataacaag
cactacatcgtcagccagctggaggcgggagggggcctcgtcctgcccgacttcaacgag
gagcagtgtaaagcggcctatcagagcctgctgatcgcggatcagcactgccggaccagg
aagtacctgctgtgcgtggcgagcggcgtgccgtgcgtgtccaatgcgtgggtgcgggac
tgctgcctggagcagaagctgctcaactacaggaactacctgctgcccgctggcatgggg
cccagccagcgcgtcgtagagtggcatccacgctgcagcccgtttaagagcctgagggtc
ctgctggtgttcgccggctcagctgagctgtggggggagctgctgaagctgagcggagcg
accagcgtgaagcaggagaaaggacaggaagacaccgacattccagccgacacgtttgat
gtgatggtgactgagcggtcctgtccctcggcggtggtgaagcgtgccagctcccgctcc
ctgcccgtggtctccctggagtggctcgtccagagcctgatcgtcggagaacgccaggac
tatgccagtgatccccagtatcgccacgactacgacctatga
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