| Entry |
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| Symbol |
hif1ab
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| Name |
(RefSeq) hypoxia inducible factor 1 subunit alpha b
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| KO |
| K08268 | hypoxia-inducible factor 1 alpha |
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| Organism |
spil Sardina pilchardus (sardine)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:spil00001]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134097258 (hif1ab)
04137 Mitophagy - animal
134097258 (hif1ab)
04148 Efferocytosis
134097258 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:spil03000]
134097258 (hif1ab)
Transcription factors [BR:spil03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134097258 (hif1ab)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:complement(19331059..19351451)
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| AA seq |
832 aa
MDVGVGTEKKRVSSDRRKEKSRDAARSRRGKESEVFYELAHELPLPHNVTSHLDKASIMR
LTISYLRMRKLLGADVSEEESEMDSQLNGFYLKALEGFLMVLSEDGDMVYLSDNVSKSMG
LTQFDLTGHSIFDFTHPCDHEEMREMLVHRTGTKKVKEQNTERSFFLRMKCTLTSRGRTV
NIKSSTWKVLHCMGHVRVQEREEVPADSGYKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLNMKFSYCDERITELMGYEPDDLLNKSVYEYYHALDSDHLTKTHHDLFAKGQATT
GQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIEESDLLLSLQQTITEPK
TEKVEVDKEEEEEEVEEEEVEEELEELEVKVVVEKTSEEKEEKNDKEKENSEQSITKLFI
SHSEVSDSDSLYEQLKASGSDLTLLAPAAGDTIISLDFTGPDSDLQLLKEVPLYNDVMLP
STSEKLPLALSPMTSLESSPSLASTLTSDPVTTATSSGPETSSPEPSSPLNYCFTVDPDI
GAEFSMDMVEKLFAIDTEARTPFSTQDMCDLDLEMRAPYIPMDDDFQLRIPSPLEPLPVG
NLPMADMSSIFQPLPSDTPSSFSSSSSPSASPFSSPSPSTSSSSAAPSPGVRLSPAPLHM
LVEGQSTPGSSPLRAVHLQDSTATDAQPRGLLERLEASKLTSRMSAVDQSLSPKMLALQN
NQRKRKLETTTLAQAVGLGALLQSVDSSLTTESSKRAKVLEVKGSSMLGGNKTILILPSD
MASRLLSNSLEAGVGNGLPQLTRYDCEVNAPIQDRHLLLQGEELLRALDQVI |
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| NT seq |
2499 nt +upstreamnt +downstreamnt
atggatgttggtgttggcactgaaaagaaaagggtgagctcggaccgcaggaaggagaag
tcccgcgatgccgctcgctcccggcggggtaaagagtcggaggtgttctacgagctggcc
cacgagctgcccctgcctcacaatgtgacctcccacctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgtatgaggaagctgctcggtgctgatgtgagcgaggaggag
tccgagatggacagccagctcaacgggttctacctgaaggctctggagggctttctgatg
gtgctctctgaggatggagacatggtctatctctcggacaacgtcagcaagagcatggga
ctcacgcagtttgatctgacggggcacagcatctttgacttcacacacccttgtgatcac
gaggagatgagggagatgttggtgcacagaacgggcaccaagaaggtgaaggagcagaac
acggagcgaagcttcttcctgcgcatgaagtgcacgctcaccagcagaggccgcaccgtc
aacatcaagtcttccacctggaaggtgctgcactgcatgggtcatgtgcgcgtccaggag
cgcgaggaggtgcccgccgactctggctacaaggagcccccgctcacctacctggtgctg
atctgcgagcccattccccacccgtccaacatcgaggtgccgctggacagcaagaccttc
ctcagccgccacaccctcaacatgaagttctcctattgcgacgagaggatcacagaactg
atgggctacgagccagatgacctgctgaacaagtctgtgtacgagtactaccacgccctg
gactccgatcaccttaccaagacacaccacgacttgtttgccaagggccaggccaccact
ggccagtaccgcatgctggccaagaagggcggctatgtgtgggtggagacccaggccacg
gtcatctacaaccccaaaaactcccagccccagtgcatcgtgtgcgtcaactatgtgctg
agtggcattgaggagagcgatctgctcttgtccctgcagcagaccatcacagagcccaag
actgagaaggtggaagtggacaaggaggaggaggaggaggaggtagaggaggaggaagtg
gaggaggagttggaggagttggaggtgaaagtggtggtggagaagacctcggaggagaag
gaggagaagaatgacaaggagaaggagaactctgagcagagcatcaccaagctcttcatc
agccacagcgaggtcagcgactccgacagcctctacgagcaactgaaggcgtccggctcg
gacctcaccctgctggcgcccgccgctggagacaccatcatctcgctggacttcaccgga
cccgactctgacctgcagcttctgaaggaggtgccgctgtacaacgacgtgatgcttccc
tccaccagcgagaagctgcccctggccctctcccccatgacctccctggagtcctctccg
tcactggccagcaccttgacctctgaccccgtcaccacggcgaccagctccggccccgag
accagctccccagagcccagtagtcccttgaactactgcttcacagtggacccagacatc
ggggctgagttcagtatggacatggtggagaagctgtttgctatcgacaccgaagcaaga
acccccttcagcactcaggacatgtgtgatctggacctggagatgcgggccccgtacatc
cccatggacgacgacttccagctccgcatcccgtcgcccctggagcccctcccggtcggc
aacctccccatggccgacatgagctccatattccagccgctgccctccgacaccccctcc
tccttctcctcctcttcctcaccctctgcttctcccttctcctccccctccccctccacc
tcctcctcctctgccgccccttctcctggtgtcaggctctctcccgcgcccctacacatg
ctggtggagggccaaagcacccccggctcctcgccgctgcgcgcagtgcatctccaggac
tccacagccacagatgcgcagccgcgcggcctcctagagcggctcgaggccagcaaactc
acctccagaatgtcagctgtggaccagtcattatctccaaagatgctggctctgcagaac
aaccaacgcaagcgcaagctggagaccaccacactggcccaggcagtcggactgggtgct
ctgttgcagagtgtggacagttccttaacgacagagtccagcaagagggccaaagtgttg
gaggtgaagggctccagtatgctcggcgggaacaagaccatcctcattctgccctctgac
atggcgagtcgtctgctgagcaactcgttggaggcgggcgtgggcaatggcctgcctcag
ctgacgcgttacgactgcgaggtcaacgctcccatccaggaccgccacctgctgctccag
ggagaggagctgctgagggcgctcgaccaagtcatttga |
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