Sardina pilchardus (sardine): 134097258
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Entry
134097258 CDS
T10667
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04140
Autophagy - animal
spil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134097258 (hif1ab)
04137 Mitophagy - animal
134097258 (hif1ab)
04148 Efferocytosis
134097258 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134097258 (hif1ab)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134097258 (hif1ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Tim54
DUF724
Motif
Other DBs
NCBI-GeneID:
134097258
NCBI-ProteinID:
XP_062406084
LinkDB
All DBs
Position
12:complement(19331059..19351451)
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AA seq
832 aa
AA seq
DB search
MDVGVGTEKKRVSSDRRKEKSRDAARSRRGKESEVFYELAHELPLPHNVTSHLDKASIMR
LTISYLRMRKLLGADVSEEESEMDSQLNGFYLKALEGFLMVLSEDGDMVYLSDNVSKSMG
LTQFDLTGHSIFDFTHPCDHEEMREMLVHRTGTKKVKEQNTERSFFLRMKCTLTSRGRTV
NIKSSTWKVLHCMGHVRVQEREEVPADSGYKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLNMKFSYCDERITELMGYEPDDLLNKSVYEYYHALDSDHLTKTHHDLFAKGQATT
GQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIEESDLLLSLQQTITEPK
TEKVEVDKEEEEEEVEEEEVEEELEELEVKVVVEKTSEEKEEKNDKEKENSEQSITKLFI
SHSEVSDSDSLYEQLKASGSDLTLLAPAAGDTIISLDFTGPDSDLQLLKEVPLYNDVMLP
STSEKLPLALSPMTSLESSPSLASTLTSDPVTTATSSGPETSSPEPSSPLNYCFTVDPDI
GAEFSMDMVEKLFAIDTEARTPFSTQDMCDLDLEMRAPYIPMDDDFQLRIPSPLEPLPVG
NLPMADMSSIFQPLPSDTPSSFSSSSSPSASPFSSPSPSTSSSSAAPSPGVRLSPAPLHM
LVEGQSTPGSSPLRAVHLQDSTATDAQPRGLLERLEASKLTSRMSAVDQSLSPKMLALQN
NQRKRKLETTTLAQAVGLGALLQSVDSSLTTESSKRAKVLEVKGSSMLGGNKTILILPSD
MASRLLSNSLEAGVGNGLPQLTRYDCEVNAPIQDRHLLLQGEELLRALDQVI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggtgttggcactgaaaagaaaagggtgagctcggaccgcaggaaggagaag
tcccgcgatgccgctcgctcccggcggggtaaagagtcggaggtgttctacgagctggcc
cacgagctgcccctgcctcacaatgtgacctcccacctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgtatgaggaagctgctcggtgctgatgtgagcgaggaggag
tccgagatggacagccagctcaacgggttctacctgaaggctctggagggctttctgatg
gtgctctctgaggatggagacatggtctatctctcggacaacgtcagcaagagcatggga
ctcacgcagtttgatctgacggggcacagcatctttgacttcacacacccttgtgatcac
gaggagatgagggagatgttggtgcacagaacgggcaccaagaaggtgaaggagcagaac
acggagcgaagcttcttcctgcgcatgaagtgcacgctcaccagcagaggccgcaccgtc
aacatcaagtcttccacctggaaggtgctgcactgcatgggtcatgtgcgcgtccaggag
cgcgaggaggtgcccgccgactctggctacaaggagcccccgctcacctacctggtgctg
atctgcgagcccattccccacccgtccaacatcgaggtgccgctggacagcaagaccttc
ctcagccgccacaccctcaacatgaagttctcctattgcgacgagaggatcacagaactg
atgggctacgagccagatgacctgctgaacaagtctgtgtacgagtactaccacgccctg
gactccgatcaccttaccaagacacaccacgacttgtttgccaagggccaggccaccact
ggccagtaccgcatgctggccaagaagggcggctatgtgtgggtggagacccaggccacg
gtcatctacaaccccaaaaactcccagccccagtgcatcgtgtgcgtcaactatgtgctg
agtggcattgaggagagcgatctgctcttgtccctgcagcagaccatcacagagcccaag
actgagaaggtggaagtggacaaggaggaggaggaggaggaggtagaggaggaggaagtg
gaggaggagttggaggagttggaggtgaaagtggtggtggagaagacctcggaggagaag
gaggagaagaatgacaaggagaaggagaactctgagcagagcatcaccaagctcttcatc
agccacagcgaggtcagcgactccgacagcctctacgagcaactgaaggcgtccggctcg
gacctcaccctgctggcgcccgccgctggagacaccatcatctcgctggacttcaccgga
cccgactctgacctgcagcttctgaaggaggtgccgctgtacaacgacgtgatgcttccc
tccaccagcgagaagctgcccctggccctctcccccatgacctccctggagtcctctccg
tcactggccagcaccttgacctctgaccccgtcaccacggcgaccagctccggccccgag
accagctccccagagcccagtagtcccttgaactactgcttcacagtggacccagacatc
ggggctgagttcagtatggacatggtggagaagctgtttgctatcgacaccgaagcaaga
acccccttcagcactcaggacatgtgtgatctggacctggagatgcgggccccgtacatc
cccatggacgacgacttccagctccgcatcccgtcgcccctggagcccctcccggtcggc
aacctccccatggccgacatgagctccatattccagccgctgccctccgacaccccctcc
tccttctcctcctcttcctcaccctctgcttctcccttctcctccccctccccctccacc
tcctcctcctctgccgccccttctcctggtgtcaggctctctcccgcgcccctacacatg
ctggtggagggccaaagcacccccggctcctcgccgctgcgcgcagtgcatctccaggac
tccacagccacagatgcgcagccgcgcggcctcctagagcggctcgaggccagcaaactc
acctccagaatgtcagctgtggaccagtcattatctccaaagatgctggctctgcagaac
aaccaacgcaagcgcaagctggagaccaccacactggcccaggcagtcggactgggtgct
ctgttgcagagtgtggacagttccttaacgacagagtccagcaagagggccaaagtgttg
gaggtgaagggctccagtatgctcggcgggaacaagaccatcctcattctgccctctgac
atggcgagtcgtctgctgagcaactcgttggaggcgggcgtgggcaatggcctgcctcag
ctgacgcgttacgactgcgaggtcaacgctcccatccaggaccgccacctgctgctccag
ggagaggagctgctgagggcgctcgaccaagtcatttga
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