KEGG   Sardina pilchardus (sardine): 134097367
Entry
134097367         CDS       T10667                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134097367 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spil03019]
    134097367 (nup43)
   03036 Chromosome and associated proteins [BR:spil03036]
    134097367 (nup43)
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     134097367 (nup43)
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134097367 (nup43)
SSDB
Motif
Pfam: WDR55 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 WD_LRWD1 Beta-prop_SCAP WD40_MABP1-WDR62_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_DCAF12 KNTC1_N PSII_BNR Beta-prop_SPT8
Other DBs
NCBI-GeneID: 134097367
NCBI-ProteinID: XP_062406237
LinkDB
Position
12:complement(22589878..22594456)
AA seq 374 aa
MDTGSTNAKYVSQKISKTRWRPVSSASLQQPEIFATGSWDNEDNKVSLWTIGDHGVASME
DEFEGDPQLLCEIKHEGDVLDLQFLDADRLVTASSSGAVTIYRHHQNNQTLSVAHRWDRA
HHYPCDNAPCTGVVCNSPEMVSVGEDGRIILFRADQTGVLRTIENADSSTIHAVTFLRTA
EVLTVNSIGQLKLWDLRQQSNEPAQILALTGDRVPLHCVDRHPNQQHIVATGGQDGMLCI
WDVRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFTCSEDGSLLHWETSSNSDTPSFLQSG
RNTSIISRSAVAPAGGNQSIISAWLSGDSGKGHLETTHMLPSQTLSVNSLDVLGQCLVCG
TDGEAVYVNRQVPV
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggataccggtagtaccaacgctaagtacgtctcacagaagatcagcaagactcgatgg
agaccagtgtcttctgcttcgttgcagcaaccagaaatttttgccaccggttcttgggac
aacgaggataataaagtgtcgttgtggaccattggtgaccatggagtggctagtatggaa
gatgagttcgagggagatccccagttactttgtgaaataaaacacgaaggagacgtcctt
gatctccaatttttagatgctgatagactagttacagcatcttcgtctggggcagtgacc
atctaccggcatcatcagaacaaccagaccctgtctgtggctcacagatgggaccgtgcc
catcactatccctgcgataatgctccatgcacaggagtggtctgcaacagccctgagatg
gtgtcagttggagaggacgggaggattatactttttcgagctgaccaaactggtgtattg
cgcactatagaaaatgcagacagcagcactattcatgccgttacattcctgagaacagct
gaggttcttacagtgaactcaattggtcaactcaaactctgggacctcaggcaacaaagc
aatgagcctgcacagatcctcgctctcacaggagatcgagttccactccactgcgtggac
agacacccaaaccaacagcacatcgtggctaccggaggacaggacggcatgctctgcatc
tgggacgtcaggcaaggcaacatgcccttctcactgatggaggcccactcagctgaaatg
tgggaagtccactttcatccatccaacccagaccacttgttcacatgctcagaggatgga
tcactgctgcactgggagacttccagcaactcagacacaccttcattcctgcagagtggc
cgcaacactagcataatatcccgcagtgcagttgccccagcgggaggaaaccagtcaatt
atcagcgcgtggctttctggagactcaggcaaaggccaccttgaaacaacacatatgctc
cctagtcagaccctttctgtaaatagtttggatgtgcttggccaatgccttgtatgtggg
actgatggagaggcagtatatgtcaacagacaggttccagtttga

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