Sardina pilchardus (sardine): 134097367
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Entry
134097367 CDS
T10667
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134097367 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134097367 (nup43)
03036 Chromosome and associated proteins [BR:
spil03036
]
134097367 (nup43)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134097367 (nup43)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134097367 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_DCAF12
KNTC1_N
PSII_BNR
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
134097367
NCBI-ProteinID:
XP_062406237
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All DBs
Position
12:complement(22589878..22594456)
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AA seq
374 aa
AA seq
DB search
MDTGSTNAKYVSQKISKTRWRPVSSASLQQPEIFATGSWDNEDNKVSLWTIGDHGVASME
DEFEGDPQLLCEIKHEGDVLDLQFLDADRLVTASSSGAVTIYRHHQNNQTLSVAHRWDRA
HHYPCDNAPCTGVVCNSPEMVSVGEDGRIILFRADQTGVLRTIENADSSTIHAVTFLRTA
EVLTVNSIGQLKLWDLRQQSNEPAQILALTGDRVPLHCVDRHPNQQHIVATGGQDGMLCI
WDVRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFTCSEDGSLLHWETSSNSDTPSFLQSG
RNTSIISRSAVAPAGGNQSIISAWLSGDSGKGHLETTHMLPSQTLSVNSLDVLGQCLVCG
TDGEAVYVNRQVPV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggataccggtagtaccaacgctaagtacgtctcacagaagatcagcaagactcgatgg
agaccagtgtcttctgcttcgttgcagcaaccagaaatttttgccaccggttcttgggac
aacgaggataataaagtgtcgttgtggaccattggtgaccatggagtggctagtatggaa
gatgagttcgagggagatccccagttactttgtgaaataaaacacgaaggagacgtcctt
gatctccaatttttagatgctgatagactagttacagcatcttcgtctggggcagtgacc
atctaccggcatcatcagaacaaccagaccctgtctgtggctcacagatgggaccgtgcc
catcactatccctgcgataatgctccatgcacaggagtggtctgcaacagccctgagatg
gtgtcagttggagaggacgggaggattatactttttcgagctgaccaaactggtgtattg
cgcactatagaaaatgcagacagcagcactattcatgccgttacattcctgagaacagct
gaggttcttacagtgaactcaattggtcaactcaaactctgggacctcaggcaacaaagc
aatgagcctgcacagatcctcgctctcacaggagatcgagttccactccactgcgtggac
agacacccaaaccaacagcacatcgtggctaccggaggacaggacggcatgctctgcatc
tgggacgtcaggcaaggcaacatgcccttctcactgatggaggcccactcagctgaaatg
tgggaagtccactttcatccatccaacccagaccacttgttcacatgctcagaggatgga
tcactgctgcactgggagacttccagcaactcagacacaccttcattcctgcagagtggc
cgcaacactagcataatatcccgcagtgcagttgccccagcgggaggaaaccagtcaatt
atcagcgcgtggctttctggagactcaggcaaaggccaccttgaaacaacacatatgctc
cctagtcagaccctttctgtaaatagtttggatgtgcttggccaatgccttgtatgtggg
actgatggagaggcagtatatgtcaacagacaggttccagtttga
DBGET
integrated database retrieval system