Sardina pilchardus (sardine): 134097558
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Entry
134097558 CDS
T10667
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134097558 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134097558 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134097558 (srsf5b)
Spliceosome [BR:
spil03041
]
Common components
Common spliceosomal components
SR proteins
134097558 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
134097558
NCBI-ProteinID:
XP_062406432
LinkDB
All DBs
Position
12:16263883..16270601
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AA seq
297 aa
AA seq
DB search
MNGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGASGGGGGRFPARYGRGSQDSRSRNPPPMRTENRL
IVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASSSDLKNALDKLSGKEIN
GRKIRLIEANKKRSRSRSRSESSSRSRSRGRSPSRSRSRSRSRKSYRSRSRSRSRSASPS
PARAKESSKRPARAESGSPPSPAPQRAPLSPARSPSRSRSRSRSHSRSLSPSSDSRH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggtgtcgcatctttattggtcgcctaaatccctctgccagggaaaaagatgtc
gaacgcttcttcaaagggtatggcagaatccgtgacattgatctgaagcgtggattcggt
tttgtggagtttgatgacccaagagatgctgaagacgctgtttatgaactcgatggcaaa
gagctctgtaatgaaagggtgactattgagcatgctcgtgtgcgcctgcgaggggggcga
ggaagaggtggcggaggtgccagtggtggtggtggtggccgcttcccagcccgctacggc
cgaggctcccaggacagtcgtagtcggaacccccctcctatgcgcaccgagaaccggctc
attgtggagaacctgtcttcaagagtcagttggcaggacttgaaggacttcatgaggcaa
gccggagaagtgacatttgctgatgcccaccggcccaaactcaacgaaggcgttgttgag
tttgcctcctccagtgatctgaagaatgccctggacaaattgtctgggaaagagatcaat
gggaggaaaatccgtctcattgaggccaacaaaaagaggtccaggtctcgttctcgttct
gagagctcttcgcgctctcgttcccgcggacgctccccgtcccgctcgcgctcccgctcc
cgcagcaggaaatcctaccgctcgcgttccaggagccgctcacgctcggccagcccctcc
ccggcccgggccaaggagtcgtccaagcgtccggcgcgggcagagtccggctccccgccg
agcccggctccccagcgcgcgcccctgtccccggcccgctccccgtctcgctcccgctcc
cgttcccgctcgcactcccgctccctctccccttcctccgacagtcgccactga
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