Sardina pilchardus (sardine): 134097939
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Entry
134097939 CDS
T10667
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a
KO
K08518
syntaxin-binding protein 5
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134097939 (stxbp5a)
Membrane trafficking [BR:
spil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134097939 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
134097939 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_Prp19
WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
Lgl_C
WD40_like
Motif
Other DBs
NCBI-GeneID:
134097939
NCBI-ProteinID:
XP_062406877
LinkDB
All DBs
Position
12:complement(23174025..23282696)
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AA seq
1135 aa
AA seq
DB search
MKKFRKVLDGLSAVSSATPSQPLGVRENDLVHETLQSEHFQLCKTVRHGFPYQPSAMALD
PVQKLLAIGTQSGALRIFGRPGVECNCQHESGAAVIQLQFLINEGALVSALADDSIHLWN
LRQKRPAVLHSLKFNKERITFCHLPFQSKWLYVGTERGNVHIVNVESFTLSGYTIMWNKA
IELSSKAHPGPVVHISDNPMDEGKLILGFEAGIVVLWDLKSKKADYRYTYDEAIHSVSWH
HEGKQFICSHSDGSLTIWNIKNPARPQQTITPHGKQPKDGKKPEPCKPILKVEYKTTRLG
EPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYANDFQEPYAVV
VLLEKDLVVIDLAQNGYPIFENPYPLTLHESPVTCCAYCADCPVDLIPALYSVGLRQKRQ
GYSKKEWPISGGNWGQGAQSYPEIVITGHADGSLKFWDASAIMLQVLYKLKTAKVFEKSR
SKDDKPSTEIVDEDPFAIQLLAWCPESRVLCVAGVSAHILIYRFSKQEVTTEVIQLLEVR
MQCELNDLDSPEVGGDQTQAAPTSSSSPSPQAAAPSTRPSTSSNNSDKDRDNVPCLKVRS
SSLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSAYGLVVFGNTTGVGVVDYLQKTVLL
NLSTAELYTTNDPYQRQPRSPRKSRQPSGGLCDINEGTATSDDRCKSPTSVLSSNHQQFY
NGAGKGAKMSRKLSLPTELKPDLDHRDNSFSRSRSSSVTSIDKEAREGITELCFCETMAR
RAEGGGAQPALWVGTLLGTVLTATLSLPPAGEQRLLQPIIASPSGALVRLKGSILRIAFL
DAAGVFQPAPYEQWYEPNAAEEERTRRRRGGGLPSPCGGGGGGGGGGGGLDLERDSQFGV
ICSEKQAKVLSLPSQTCVSKHNITETSFVLRADVVVLNSGACVACFCANGHIMTLSLPYL
RPLLDVNYLPLTDMRIARTFCFSNLGQALYLNSPTEIQRLTYSQEVCENLQEMLGEMFIP
VETPEAPNRGFFKGLFGGGAQSLDREDLFGETGAGKAPRSLAQHIPGPGGIEGMKGAASG
IMGDLARTRMALDERGQKLSEVEEKTAAMMASADNFSKHAHEMMLKCKDKKWYQF
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggtgctggacggactatcggccgtgtcttccgccacgccgtcg
caaccgctgggcgtgcgagaaaacgacctggtccacgagacgctccagtcggagcacttc
cagctctgcaagactgtccgtcatggcttcccttaccagccctcggccatggccctggac
cccgtccagaagctcctggccatcggaacgcagagtggagctctacggatatttggccga
ccaggagtcgagtgtaactgtcagcatgagagtggagcagccgtcattcaactgcagttc
ctcattaatgagggggcgttggtgagtgccctggccgatgacagcatccatctctggaat
ctccgtcagaagagaccagccgtacttcactcactaaagttcaacaaagagaggataacg
ttctgccacctgcccttccagagcaaatggctgtatgtgggcacggagcgcggcaacgtc
cacatcgtcaacgtggagtctttcaccctctcaggctacaccatcatgtggaacaaagcc
atcgaactctcttccaaggctcatcctggcccagtggtgcacatcagtgataaccccatg
gacgaggggaagctgatccttggatttgaggctggaatcgttgtgctgtgggacttaaaa
tcaaagaaggcagattaccgttacacatatgatgaggctatccactctgtgtcctggcac
catgaggggaagcagtttatctgcagtcactctgatggctctctcaccatctggaacatc
aagaaccccgccagaccccaacagacaatcactccgcacggaaaacagcccaaggatggg
aagaagccagagccatgtaaacccatcctcaaggtggagtacaaaaccactcgacttgga
gagccctttataatcctctcgggcggactgtcgtatgacaccgttggccggcggccctgc
ctgacggtgatgcatggcaagagcacggccgtgctggagatggactaccccattgtggac
ttcctcaccctctgcgagacaccctacgccaatgatttccaggagccatatgctgtggtt
gtcctgctggagaaagacttggttgtaattgaccttgcacagaacgggtaccccatcttt
gagaacccctaccccctgacgctgcacgagtctccggtcacctgttgtgcgtactgcgct
gactgcccagtggacctcattcctgcactttactctgtgggcctacgccagaaacgccag
ggctacagcaaaaaggagtggcctattagtggggggaactggggtcagggtgcacagagc
tatcctgagatagtcatcacggggcatgccgatggctcattgaaattctgggatgcctct
gcaataatgctgcaggttctgtacaagctgaagacggccaaggtgtttgagaagagccgg
agcaaggatgacaagccgagcaccgagatcgtggatgaggacccctttgccatccagctg
ctggcctggtgcccagagagtagggtgctgtgtgtggcgggggtgtccgctcacatcctc
atatatcgcttcagcaagcaggaggtcaccacagaggtcatacagttgctggaggtgcgt
atgcagtgtgagctgaacgatctggactctcccgaggtgggcggtgaccagacgcaggcg
gcgcccacctctagctcctcccccagccctcaggccgccgcgccttccacacgcccgtca
accagcagcaacaactcggacaaagacagagataacgtgccctgcctcaaggtgcgcagc
tcgtctctgaagcagtcgccggggtatcaggtggagctggtggtgcagcttgtgtgggtg
agtggggagccgccccagcagatcagcagcctggccatcaactcagcctacggccttgtg
gtgtttggcaacactacaggtgtgggagtggtggactacctgcagaagacggttctgctc
aacctgagtacagctgaactctacaccaccaacgacccctatcagcgacaaccacgctca
ccacgcaagagcagacaaccctctggaggtctgtgtgacatcaacgagggcacggccacg
tcagacgaccgctgcaaatctcccacctcagtgttgagctcaaatcatcagcagttctac
aatggagcaggcaaaggtgcaaagatgtccaggaagctaagcttgcccactgagcttaag
ccagacttggaccaccgggacaactccttcagccgctcgcggagctccagcgtgaccagc
atcgacaaggaggcgcgcgagggcatcaccgagctctgcttctgcgagaccatggcccgg
cgggcggagggcggcggggcgcagcccgcgctctgggtgggcaccttgctgggcaccgtg
ctcaccgccaccctcagcctgccccctgctggagagcagcggctactgcagcccatcatc
gcctcgcccagcggtgctctggtgcgtctgaagggcagcatcctgcgcatcgccttcctg
gacgccgccggggtcttccagccggccccgtacgagcagtggtacgagcccaacgcggcc
gaggaggagcgtaccaggcgccgtcgcgggggtggcctgccctcgccctgcggaggagga
ggaggtggaggaggaggcggaggagggctggacctggagagggactcccagttcggcgtg
atctgctcggagaagcaggccaaggtgctgtcgctgccctcgcagacgtgcgtgtccaag
cacaacatcacggagacgtccttcgtgctgcgcgccgacgtggtggtgctcaacagcggc
gcctgcgtggcctgcttctgcgccaacggacacatcatgacgctcagtctcccctatctg
cggccgctgctggatgtgaactacctgcccctgacggacatgcgcatcgcccgcacgttc
tgcttctccaacctgggccaggcgctctacctgaactcgcccactgagatacaaagactc
acctacagccaggaggtctgcgagaacctgcaggagatgctgggggagatgtttattcca
gtggagacccccgaggcacccaatcggggattcttcaaggggctgtttggaggtggagcc
cagtcgttagacagggaggacctattcggggagactggcgcgggtaaagccccgcgtagc
ctggcgcagcacatcccgggccccggaggtatcgagggcatgaagggcgccgcctcgggc
atcatgggggacctggcgcggacccgcatggcgctggacgagcgagggcagaagctgagc
gaggtggaggagaagacggcggccatgatggccagcgccgacaacttctccaaacacgca
cacgagatgatgctgaaatgtaaagataagaagtggtaccagttctga
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integrated database retrieval system
