Sardina pilchardus (sardine): 134098072
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Entry
134098072 CDS
T10667
Symbol
elp3
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134098072 (elp3)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
134098072 (elp3)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
134098072 (elp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
134098072
NCBI-ProteinID:
XP_062407003
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Position
12:complement(24603520..24624953)
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AA seq
548 aa
AA seq
DB search
MGKPKKKSDLSRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLSAQPRLVD
IIAAVPPQYRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSD
FEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALAE
EYRDYFIRNLHDALSGHTSNSVTEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYG
CTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLAKDAGFKVVSHMMPDLPNVGMERDIE
QFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYSPSALVDLVARILALVPPW
TRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQ
VELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRAELKGGVSIVRELHVYG
SVVPVSSRDPSKFQHQGFGMMLMEEAERIAREEHGSSKLAVISGVGTRNYYRKMGYELDG
PYMLKRLD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggaagccaaagaagaagagtgacctcagccgtgcggagctgatgatgatgacgata
gccgacgtcatcaagcaactggttgaggctcatgaggaggggaaagacatcaacctcaac
aaggtgaaaacgaagacgtcggctaagtacggcctctccgcacaaccgcgcctggtggac
atcatcgccgctgttccgcctcagtaccggcgcgccctggtgcccaagctgaaggccaag
cccatccgcacagccagtgggatcgcagtggttgcagtcatgtgcaaaccacaccgatgt
cctcacatcagcttcacagggaacatctgtgtatattgtcctggaggtcctgactcagat
tttgagtattccacacaatcttacacaggatatgagcccacgtcaatgagggccatccgg
gcacgctacgacccctacctgcagacgcgacaccgagtggaacagctgaagcagctgggc
cacagcgtggacaaggtggagttcatcgtgatgggcggcaccttcatggccctggcggag
gagtaccgcgactacttcatcaggaacttgcacgatgccctgtccggccacacctccaac
agcgtgacagaggccgtccggtactccgagcgcagcaacactaagtgtgtgggcatcacc
atagagacgcggccggactactgcctgaagcggcacctgagcgacatgctgggctacggc
tgcacgcgcctggagatcggcgtccagagcgtctacgaggacgtggcgcgagacaccaac
aggggccacacggtgcgtgcggtgtgtgagtcgttccagctggccaaagacgccggcttt
aaggtggtgtcccacatgatgcctgacctgcccaacgtgggcatggagcgagacatagag
cagttcatcgagttcttcgagaaccccgcgttccgtccagatggactgaagctgtacccg
acgttggtgatccgcggcacgggtctgtacgagctgtggaagacgggccgctacaagagc
tactctcccagcgccctggtggacctggtggcccgcatcctggctctggtgccgccctgg
acccgagtgtaccgtgtccagagggacatccccatgccgttggtgagctctggggtggag
catggcaacctgagggagctggctttggcccgcatgaaggacatgggcactgagtgtcgg
gacgtaagaaccagagaggtgggcattcaggagatccatcacaaagtgcgaccctatcag
gtggagctgatcaggcgcgactacgtggcgaacggcggctgggagacgttcctgtcgtac
gaggacccggagcaggacatcctgatcggcctcctccggctgcgccgctgctcgccgcag
tccttccgcgccgagctcaagggcggcgtgtccatcgtgcgcgagctccacgtctacggc
agcgtggtgcccgtcagcagcagagaccccagcaagttccagcaccagggctttggtatg
atgctgatggaggaggcagagagaatcgcccgagaggagcacggctccagcaagctcgct
gtcatctcaggggtaggaactaggaactactacagaaagatgggatatgagctagatgga
ccgtatatgttgaagcgcctcgattga
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