KEGG   Sardina pilchardus (sardine): 134098171
Entry
134098171         CDS       T10667                                 
Name
(RefSeq) claudin-20
  KO
K06087  claudin
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03272  Virion - Hepatitis viruses
spil04382  Cornified envelope formation
spil04514  Cell adhesion molecules
spil04530  Tight junction
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    134098171
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134098171
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    134098171
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134098171
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:spil03037]
    134098171
   04147 Exosome [BR:spil04147]
    134098171
   04515 Cell adhesion molecules [BR:spil04515]
    134098171
Cilium and associated proteins [BR:spil03037]
 Other cilia and associated proteins
  Stereociliary proteins
   134098171
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   134098171
  Exosomal proteins of colorectal cancer cells
   134098171
Cell adhesion molecules [BR:spil04515]
 Immunoglobulin superfamily
  L1 family
   134098171
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM_230_134
Other DBs
NCBI-GeneID: 134098171
NCBI-ProteinID: XP_062407134
LinkDB
Position
12:10977799..10979342
AA seq 319 aa
MLSSALQILAFALALLGVFGATVATLLPNWKVSAEQGPNIITAISQMQGLWMDCTWWSTG
VFSCTLKYSVLALPAYLQTARTTMVLSCMMATLGLCLAALGLKCTRWGGSHRAKGHTAIA
AGACFVVSGVLCLVPASWFTNEVITNFLDARVPESSKFEPGGAVYVAFVSAGFFLASGVI
FCLSCPGKRQGPLDSGSSHPSKALSKPPPSLQQQQPEQQPSVATPHREQVSREQQTQSPD
QSHAQPPPLPQPNGNREKASVPEKLLHADEGPPPSPHRALDKLHQDKLGQDQEQGYYSPS
RSRPPPPDIKKGYSLQDYV
NT seq 960 nt   +upstreamnt  +downstreamnt
atgctctcctccgccctccagatcctggcgttcgccctggctctgctgggcgtgttcggg
gcgacggtggccacgctgctgcccaactggaaggtgagcgccgagcagggccccaacatc
atcacggccatctcgcagatgcaggggctgtggatggactgcacttggtggagcaccggc
gtgttcagctgcacgctcaagtactcggtgctggcgctgcccgcctacctgcagacggcc
cgcaccaccatggtgctctcctgcatgatggccaccctggggctgtgtctggccgccctg
gggctgaagtgcacccgctgggggggcagccaccgcgccaaggggcacacggccatcgcg
gcgggcgcctgcttcgtggtgtccggggtgctgtgtctggtgcccgcctcgtggttcacc
aacgaggtcatcaccaacttcctggacgcccgcgtgccggagagcagcaagttcgagccc
ggcggcgccgtctacgttgccttcgtgtcggccgggttcttcctggcgtccggcgtgatt
ttctgcctgtcgtgcccggggaagcgccaggggcccctggactcgggctcctcccacccc
agcaaggcgctctccaagccgccgccgtcgctgcagcagcagcaacccgagcagcagcca
tcggtggcgacgccacaccgcgagcaggtgagtcgcgagcagcagacgcagtcgcccgac
cagtcgcacgctcagcccccgcccctgccgcagcccaacggcaaccgggagaaagcctcc
gtcccggagaagctgctccacgccgacgaggggccgcccccgtcgcctcaccgggcgctg
gacaagctgcaccaggacaagctcggccaggaccaggagcaggggtactactcgccgtcc
cgctcccgacccccgccccccgacatcaagaagggctacagcctacaggactacgtgtaa

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