Sardina pilchardus (sardine): 134098190
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Entry
134098190 CDS
T10667
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
spil Sardina pilchardus (sardine)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
134098190
NCBI-ProteinID:
XP_062407161
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Position
12:3044539..3050208
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AA seq
662 aa
AA seq
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MDLRLICVLLLVVALAEATPERYHYQVKKHQPPPPPVKAHPIPGEPGTPGSPGAPGPHGP
PGPPGPPGKSGVGHPGPKGPPGQPGTPGYSATGKPGTPGSPGKPGANGIPGAKGHAGPPG
QMGPRGPSGSPGTPGPAGYSAVGKSGPVGAPGPMGPGGSMGPSGAPGMPGQPGQKGERGV
GIPGSPGGPGGMGAMGPVGPPGKSGIGAPGATGHPGDPGKPGGPGRDGIPGTPGQPGLKG
HPGPPGVGAPGKSGVNGNPGFPGPQGPKGPQGPAGQPGSPGLPGVGKPGPSGVPGGRGSP
GSPGTTGQKGEPGPTGFTGAPGGIGPMGQAGPQGARGFQGEQGAVGVKGDMGAMGPQGQK
GLKGDQGHQGLTGKPGIPGTVGPTGPSGHMGHQGQKGEQGFTGQPGIPGTKGPAGVKGHP
GPPGPRGERGENGFPGGRGPVGPSGPSGLPGLKGHPGAPGLPGPAGVMAKGMSGPQGPPG
SPGARGQDGLPGPAGPPGAPGAPGEVIYHHEKSMPIKSHEVVPVAHELVKAPMSAFSAVL
TRAYPPPGAPIAFETVLYNGEQHYDPGSGIFTCQVPGLYYFAYHMHVNGANLLVALYKNG
QPMVFTYDEYNKGFLDQMSGSAVLELHAHDTVYVAVPDEESNGVFAADNVHCSFSGFLIA
AT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgactcatatgcgttctacttctggtggtagccttggcagaggccacccca
gagagataccactaccaagtgaagaagcaccagcctcctccacctccagtcaaggcccac
cctatcccaggggagccaggaactccaggtagccctggagcacctggaccacacgggccc
cccggcccccctggaccacctggaaaaagtggtgttggacaccctggaccaaagggtccc
cctggacaaccaggaacacccggctactctgcaactggcaaacccggtaccccggggtcc
cctggaaaacctggtgccaatggtattcctggggcaaaaggacatgctggtcctccaggt
caaatgggcccaagagggccatcaggtagccccggaacccccggacctgctggatactct
gctgttggaaaatctggacctgtaggagctcctgggccaatgggaccaggtggttcaatg
ggaccttctggtgcacctggcatgccaggacagccaggtcaaaaaggcgagagaggtgtg
ggcattccaggctcaccaggtggcccaggtggaatgggagcaatgggtcctgttggtcca
cctggaaagtctggaattggggcaccaggtgcaacaggacatcctggtgaccctggaaag
ccaggtggtccaggtagagatggtattcctggaacccctgggcaaccaggtttaaaaggc
caccctggccctccaggagtgggcgctccaggtaaatctggagtaaatggtaaccctggt
ttccctggcccacaagggcctaaaggtccacaaggacctgccggacagccagggtctcca
ggtctaccaggtgttggcaagccagggccaagtggagttccaggaggcagaggttcacca
ggttcgccaggtacaacagggcagaaaggtgaaccaggcccaacaggattcacaggtgct
ccaggaggtataggtcccatgggccaagctggtcctcagggtgctagaggatttcaggga
gagcagggtgccgtgggtgttaaaggtgatatgggagccatgggacctcaagggcaaaag
ggtcttaagggtgatcagggacatcaaggtttaacaggaaagccaggtattccaggtact
gttggaccaactggcccttcaggtcatatgggacatcaaggtcaaaagggtgagcaaggt
tttactggtcaaccaggtattccaggtacaaaagggccagctggagttaaggggcaccca
ggaccacctggaccaagaggagagcggggagaaaatgggttcccagggggtagaggacca
gtcgggccaagtggcccaagtggactgccagggcttaaaggtcacccaggtgccccaggt
cttcctggccccgcaggtgttatggctaagggaatgtctggtcctcaaggaccaccagga
tctcctggtgccagaggtcaagatggtctcccaggtccagctggaccaccaggagcccct
ggcgcaccaggtgaggtcatttaccatcatgagaagagcatgccaatcaaatcccatgag
gttgtgcctgttgctcatgagttggttaaggccccaatgtctgccttttcggctgttctg
acaagggcttatccaccaccgggtgcccccattgcctttgaaaccgttttgtacaatggt
gagcaacattatgatcctggctctggcatctttacctgccaagtccctggactctattac
tttgcttaccatatgcatgtcaatggggcaaatctcttggttgcactctacaaaaatggt
cagccaatggttttcacttatgacgagtataacaagggcttcctggatcaaatgtctgga
agtgctgttcttgagctgcatgctcatgacacagtctacgtcgcagttcctgatgaggaa
tctaatggtgtgtttgctgccgataatgttcactgctctttctctggtttcctgattgcc
gcaacgtga
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