Sardina pilchardus (sardine): 134098377
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Entry
134098377 CDS
T10667
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spil04990
]
134098377
Domain-containing proteins not elsewhere classified [BR:
spil04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
134098377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
RAP1
Motif
Other DBs
NCBI-GeneID:
134098377
NCBI-ProteinID:
XP_062407395
LinkDB
All DBs
Position
2:complement(18674369..18732403)
Genome browser
AA seq
1889 aa
AA seq
DB search
MASPGADHGPKNQDHNEHHESTPEPAFQEAQKWIEAVTGRSFGDKDFRGGLENGILLCEL
LSSIKPGLVKKINRLPTPIAGLDNLTLFLRGCEELGLKGSQLFDPGDLQDTSIRANLTGS
DCSRKLKNVLITIYWLGKAANGCTTYSGPTLDLKEFEGLLSHLRKECEDTESPKRSIRDS
GYIDCWDSERSESLSPPRHCRDDSFDSLDSYGSRSQQTPSPDVVLRGNSDGRGSDSEGDS
RKLPDVRKDDMLARRTSYNEPRAAVPFNQYLPNKSNQGAYVPTPLRRKRPECEEGRKSWS
SATSPVGAERTHSHPEPIQEESLAPEGELDEGQVGGKCPVGSLREVRVRAVPRGMGLPKT
VTWAQDGGAEEEQENRPEMQEEEEEEMEERMRKMKRLEKAGIKVLPASVRYGSPRDAAAE
SDGVKPASPDIILRCENDFLRNQQAHAWDSDEEEEEEDAAGGERKVPDVRRDDLASRRAR
MNRGPARGAHHFLPGSCSRRDQERWEALRRKSQQAKDDLARRRAKSRPQRHRDPLQPLLQ
TSMSQRDMERWQRLKLNTEASENEPQSPQSPEVAIITRKENPFLSPQRRREGEEEEEERK
KGQGAEEEEEGRSEAVPNVQKDDLAKRRAQRGPRPHREPVNPLVQASITQADMEKWQRLK
MTTEDSSDSPPICQACIEKISQPPAISTTTAAQDDLASRRARGPRRSPGSRQQRFVTFGP
VTEMDQRCWERLSIARPGQGGDEDEEEEEEEEEGGKGERDESQTLRRLLSAAPVAMPTIG
ASSPLQKRLGSPDTASDPTAASSAHTSVRDIGRPLTSAEHEQLDDLLAQYGRRVPDEREE
EGREEEEEEERQPDVRKDDMLARRTAAQQKSGGVQAHNRFLPMPGGAKAQPPRDAAQNGH
AQRRMVTIVGNRPKPEAATEYSEWNIKTTRNWIGQRTESQKQEPKVSTPPVATEMQKDLY
VASSVGAAGHRQGSVDRACGDDWDEEYDDDGPLPDPEKDDMLARRTGAHQKAVGGTGQRF
LPVPGTARYKSTPAASVGQSQQKPKDRFSHRAASAADEPESMSMFDMRCEEEAILPPHSQ
SRHEDLGDNKEDEWQDDLARWKNRRRSASQDLIKKENERKMMEKMMKEEHASALRRKSIK
TYKEIVEEKERREQELHEAYDRACTPEEKAAVLQRYALRFTISDAILERLQIPQPPEKGA
PQLPSAATTATATTTAPASDTATTPTDTDTARAPAPVAPPQPRSPPVASQPKQPQRPPSP
AKFTPGGAKAAVEDAPKPKVPSQQQTRTMSPPFQPQGRTLTPEQSPTRAPPAPSKPVPLF
TPKPYSQPRPNQTGHKPVKSLQTDGLVRINGEMNAEDKKEITRLSSPPPPLPPTAPAANQ
STAGTTQGGATVAPPTSPLTSAKPPQEERQPSSPQRDTTKAGEEREEEQRATPTSPSPLE
RSQGGEQASADVTQSPLRVSEQKDLAAGGKRNCVIKTTIVTELTHTQVIDESDATTRTWM
NSSASSAQSPEDQSVSYSEYSRTDSAQSSTLTSSSTTVPDSSHSSGSSRLRWEFFATPEG
LENPMECIETPILNLAKRVDHWTWDPNEERKRQERWQQEQERLLKEKYQREQEKLKQEWE
RAQREVEEEEKRHHEEERRILEETMTPLTSRSGSGGLTSPVSSPQRTQDSIVLSLSELDR
KLTQDKQTESGGHTSTHNGVAHTQSPTLHSPAQTGPPTPVQQNGKVPSPLDNSESATPQL
QFIQDGSWRSSPADRKPQSDEWKKTSSLDRNFSSPQNYPASMRRSGSYENVLGSSTPSPT
SPDTLPPSPSRSVSGKKLCSSCAQPLGKGAAMIIETLGLYFHIQCFKCGMCKGLLGDTST
GTDVRIRNGLLNCQECYIKSRAAGQPTTL
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccaggggcagatcacggccctaagaatcaagaccacaacgaacaccacgaa
tcgacccccgagcctgcattccaagaagcccagaaatggatagaggcagtgacgggaaga
agcttcggagacaaagacttccgtggagggctagagaacggcattctgctgtgcgagttg
ctgagctccatcaaaccagggcttgtgaagaagatcaacagacttcctactcctatagct
ggactggataacctgactctgttcctcagaggctgtgaggagttgggcctgaaaggatca
cagctgtttgaccctggggatcttcaggacacctccatacgtgctaacttaactggctct
gactgcagcaggaagctgaagaatgtgttgattaccatatactggcttgggaaggcagcc
aacggctgtaccacatacagtggccccacgctggacctcaaggagtttgaagggctgctg
tctcacctgagaaaggagtgtgaggacacagagagccctaagcgcagtatccgtgacagt
ggttacatcgactgctgggactcggagcgcagcgagtccctgtcccctccgcggcactgc
cgagacgactcctttgacagcctggactcgtacggctcgcgctcgcagcagacgccctcc
ccagacgtcgtcctccggggcaacagcgacggccgaggcagcgactccgagggcgactcc
cggaagcttccggacgtgcgcaaggacgacatgctggcgcggcgcacctcctacaacgag
ccgcgcgcggccgtgcccttcaaccagtacctgcccaacaagagcaaccagggcgcctac
gtgcccacgccgctgcgcaggaagaggccggagtgcgaggagggccgcaagagctggagc
agcgccacctcgcccgtcggcgccgagcgcactcacagccaccctgagcccatccaggag
gagagcctggcccccgagggggagctggacgaggggcaggtgggtggtaagtgcccggtc
ggctccctgcgggaggtgagggtgagggcagtgccacggggcatggggctccccaagacc
gtcacgtgggcgcaggacggaggagcggaggaggagcaggagaacaggccggagatgcag
gaggaggaggaagaggagatggaggagaggatgaggaagatgaagaggctggagaaagcc
gggatcaaagtgctgcccgcgtccgtacgctacggcagtcccagagatgcggccgcagag
agcgacggggtcaagcccgcctcgccggacatcatcctccggtgcgagaacgacttcctg
cggaaccagcaggcgcacgcctgggactcggacgaggaggaagaggaggaggacgcggcg
gggggcgagaggaaggtgcccgacgtgcggcgggacgacctggcgtcgcggcgggcgcgc
atgaaccgcggacccgcccgaggtgcccaccacttcctgccgggctcctgcagccggagg
gaccaggagaggtgggaggccctccgccgcaagtcccagcaggccaaagacgacctggcc
cgccggcgcgccaagagccggccccagaggcacagggaccccctgcagcccctgctccag
acctccatgagccagagggacatggagcggtggcagaggctgaagctcaacacagaggcc
agtgagaatgagccgcaatctccacaatctcctgaggtggccatcataactcgaaaagag
aaccccttcctaagcccccagagaagaagggaaggggaggaggaggaggaggagaggaag
aagggtcagggtgcggaggaagaggaagagggccgcagcgaggcggtgcctaacgtgcag
aaggatgacctggccaagaggagggcccagagggggccccgcccgcacagggagcccgtg
aacccattggtccaggcgtccatcactcaggccgacatggagaagtggcagaggctaaag
atgaccacggaggacagcagtgactccccgccaatatgtcaggcctgcattgagaaaatc
tcccagcctcccgctatctccacgacgacggcggcccaggacgacctggccagtcgccgc
gcccgcggcccccgccgctcgccgggcagccgccagcagcgcttcgtgacgttcggtccg
gtgacggagatggaccagaggtgctgggagcgcctgagcatcgctcggccagggcagggg
ggcgacgaggacgaggaggaggaggaggaggaggaggaaggggggaagggcgagagagac
gagtcccagacactccgacgcctcctctccgccgcgcccgtcgccatgccaaccattggg
gcgagctctccgctccaaaaaaggctgggcagccctgacactgccagtgaccccacggca
gcctcgagcgcacacacctccgtgcgcgacatcggccgacctttgacctcggccgagcac
gagcagctggacgatttgctggcgcagtacggccgaagggtcccggacgaacgagaagag
gaggggcgagaagaagaagaggaggaggagagacagcctgacgtgaggaaggacgacatg
ctggcccgccgaacggccgcgcagcagaagtccggcggcgtccaggcccacaaccgcttc
ctccccatgccaggcggcgccaaggcccagccgcctcgcgacgccgcccagaacggacat
gcccaacgcaggatggtgaccatcgtggggaaccgccccaagccagaggcagccaccgag
tactcagagtggaacattaagaccaccaggaactggataggacagagaacagagtctcag
aaacaggagcccaaggtgtccactccaccggtcgccacggagatgcaaaaagacctttac
gtcgcctcatcggtcggcgcagctggccacagacagggcagcgtggacagagcgtgcggc
gacgactgggacgaagaatacgacgacgacggtccgctgccagacccggagaaagacgac
atgcttgcgcggaggacaggagcacaccaaaaggctgtaggggggacagggcaacgcttt
ctccctgttccaggcacagcccggtacaaaagcacccctgctgccagtgtgggtcagtcc
cagcagaagcccaaggacagattcagccacagagctgctagtgcagctgatgagccagag
agcatgagcatgtttgacatgcgctgtgaggaggaggccatcttgccgccgcacagccag
tcgcgccacgaggacctgggcgacaacaaggaggacgagtggcaggacgacctggcccgt
tggaagaaccggaggcgaagtgcgtctcaggacctcatcaagaaggagaacgagaggaag
atgatggagaagatgatgaaggaggagcacgcatctgcacttcggaggaagagtatcaag
acctacaaggagattgtggaagagaaggagcgtcgcgagcaggagctgcacgaggcgtac
gaccgggcctgcacccccgaggagaaggcggccgtgctgcagcgctacgccctgcgcttc
accatcagcgacgccatcctggagcgcctgcagatcccgcagccgcccgagaaaggagcc
ccccagctgccctccgccgcgacgaccgccaccgccaccaccacggcacccgcctccgac
accgccaccacccccaccgacaccgacaccgcccgcgccccagccccagtagccccaccc
cagccccggtcgcccccggtcgctagccagcccaagcagcctcagcggccaccctctcca
gccaaattcacccccggcggcgccaaggctgccgtcgaagacgcccccaaacccaaagtg
ccctcgcagcagcagacgcggacgatgagcccccccttccagccccagggccggaccctg
accccagagcagtcgcccacccgcgcccctcccgcgccgtccaaacccgtgcctctgttc
acgcccaagccttacagccagcccaggcccaaccagaccggacacaagcctgtcaagtcc
ctgcagactgatgggctggtgcgcatcaatggagagatgaacgccgaagacaaaaaggag
atcaccaggctgagctctccgccgcctccgctgcctcctacagccccggcagccaatcag
agcacggctgggaccacacagggaggagccaccgtcgcgccccccacgtctcccctgacg
agcgccaaacccccccaggaggagcgtcagcccagctccccgcagagggacaccaccaag
gcgggggaggagagggaggaggagcagcgagcgactcccacgtctccctcgcctctggag
aggagccaaggaggagagcaggcgtctgctgacgtcacccagtctccactcagagtgtcc
gaacagaaggacctcgctgctggagggaagcggaattgcgtgatcaagacgaccatcgtg
acagaactcacacacacacaggtcattgatgaatcagatgcaaccactagaacatggatg
aacagctctgcgagttctgctcagtcccctgaggaccagtccgtttcctactccgagtac
agtagaactgactcagcacagagcagcaccctgacctcatcttccaccacagtgccagat
tcctcacactcgtctggtagctctaggttgcgctgggagttcttcgcgacgccagagggc
cttgagaaccccatggagtgtattgagacccctatcttgaatctggctaagagagttgac
cattggacatgggatcccaatgaggagcgcaaacgtcaagaaagatggcaacaagagcag
gagcgcttgctgaaggagaagtaccagcgcgagcaggagaagctgaagcaggagtgggag
cgagcccagcgggaggtggaggaggaggagaagaggcaccatgaggaggagagacgtatc
ctcgaggagacgatgaccccgctgacctctcgttcaggcagcggagggttgaccagtcca
gtgtcctccccgcaacgcacccaggacagcatcgtcctgtcactgtcggagctggacagg
aaactgacccaagacaagcagacagaaagtggaggacacacaagcactcacaatggagtg
gcacacacacagagtcccacccttcacagcccagctcagacagggccacctacaccagtg
caacagaatgggaaggtcccctctcctctggacaacagcgagtcagccaccccacagctg
cagttcatacaggacggctcatggagaagctcgcccgccgacaggaagccacagagtgac
gaatggaagaagacttcctccctggaccgcaacttcagttcaccacaaaactaccctgcc
tcgatgagaaggtcagggtcctatgagaacgttttagggtcatccacaccatctccaaca
tcacccgacaccctgcccccctcccctagcagatctgtgagtgggaagaagctgtgttcg
agctgtgctcagcccctgggcaaaggcgcagccatgattatcgagacgctggggctgtac
tttcacatacagtgcttcaagtgcggaatgtgtaaagggcttctgggagacaccagcacg
gggacagacgtcaggattcgtaacggcctcctcaactgtcaagagtgctacatcaaatca
cgtgctgctggtcagcctaccacgctgtga
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