Sardina pilchardus (sardine): 134098413
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Entry
134098413 CDS
T10667
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134098413 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134098413 (cnga1a)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134098413 (cnga1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Presenilin
FGF-BP1
PPP4R2
DDHD
Piezo_TM1-24
Raftlin
Motif
Other DBs
NCBI-GeneID:
134098413
NCBI-ProteinID:
XP_062407443
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Position
2:19822796..19834335
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AA seq
745 aa
AA seq
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MNARTCVSLTQRRRMDKTVTLPLSFFPISIISKSLRGCPHKFADMTSAQSGHGAAQPSHA
VPRTMSEEAEEASDRPRRSFGAIDSLNMNNNNNNEEDEKEKKKEKKEKKEKKEKKEKKNN
GEDDKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKDKDKDKKEVPKEPFIMNPGSS
LYNYWLFIISIPVMYNWTVIIVRASFEEFQHRNLYTWFFLDYTADLVYLADIAVRTRTGY
LEQGLMVKDEKKLLAEYMSSRQFKLDAISMLPTDLLYFYLGLDYPEIRMNKLLRINRIFE
FMQRMETKTNFPNILRIWTLVMYIIIITHWNCCLYYSFSKAIGFGSDPWVYPSLEEKEFG
MLLTKYSFSLYWSTMTLTTIGEMPPPELDSEFFFHTVDFLAGVFIFATIVGNVASMISNM
NAARAKFQARIDNIKQYMHARKVSKDLELRVITLFDYLWNTNRSQDEREVLRYLPDKLRA
EIGISVHLETLKKVRIFADCEAGLLIELVLKLRPVVFSPGDYICRKGDIGREMYIIKDGK
LAVVADDGVTQFVVLGEGSYFGEISILQIKGSKAGNRRTANIRSVGYSDLFLLSKDDLME
ALTEYPDAKAMLEDKGRQILMKDNLIELDPSKLKPDEKDLEGNVNRLFSNIEMLKGKLSK
VMKDHKGARKALKERISQIERTMKSIMQENITKIVSEWEMVVFTQGLFALQRYLHAGWVA
GKCCISEYPLETGEIEETGGKTTCT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacggacctgtgtctccctaacacaaaggaggaggatggataagactgtgact
ttgccgctgtcattcttccccatctctataatctccaaatccctgagagggtgtccacac
aagtttgcagatatgacatcagctcagagtggtcatggggctgcccagccatctcacgca
gtcccccgcaccatgtctgaggaggcagaggaggccagtgacagaccccgaagatcattc
ggcgccatagactcccttaacatgaataataacaacaacaatgaagaggatgagaaggag
aaaaagaaagagaagaaagagaaaaaagagaagaaagagaaaaaagaaaagaagaacaat
ggagaagatgacaaagaaaaagaaaaggaaaaagagaaagagaaggaaaaagaaaaggaa
aaagagaaagaaaaagagaaagaaaaggagaaagaaaaggagaaagaaaaggagaaagac
aaagacaaagacaagaaagaagtaccaaaggagccattcattatgaacccaggaagcagc
ctgtacaactactggctcttcataatctcaatccctgtcatgtacaactggactgtgatc
attgtgagagcatcttttgaggaattccagcacaggaacctgtacacttggttcttcctg
gactacaccgctgacctggtgtatttggctgatattgccgtgagaacaaggacaggttac
ctggagcaaggcctgatggtcaaggatgagaaaaagcttttggctgaatacatgtcaagt
agacagttcaaactggatgcaatttcaatgttgcccactgatctcctgtacttttacttg
ggtctcgactatcccgagatccgcatgaacaaacttctccggatcaaccgtatatttgag
ttcatgcagcgcatggaaaccaaaaccaacttccctaacatcttgcgcatctggaccctg
gtcatgtatatcataatcatcactcactggaattgctgtctctactattcattctctaag
gccattggctttggctcagacccttgggtctacccttcgctggaagagaaggagtttgga
atgctgctgacaaagtactccttcagcctttactggtccaccatgacactgaccacaatc
ggtgagatgccacctcccgagcttgactccgagttcttcttccacaccgtcgatttcctg
gcaggcgtgttcatctttgccactatcgtaggtaatgtggcctccatgatttccaacatg
aacgcagctcgagccaaattccaggcgcgcatcgataacatcaagcaatacatgcatgcg
cgcaaggtgagcaaggacctggagttgcgtgtcatcaccttgtttgactacctgtggaac
accaaccgatcgcaagacgaacgggaggtgctgcggtacctgccggacaagctgcgggcg
gagattggcatcagcgtgcacttggagaccctcaagaaagtgcgtattttcgccgactgc
gaggccggacttctgattgagctggtgctcaagctgcgccccgtcgtcttcagcccaggg
gactacatctgccggaaaggcgacatcggccgggagatgtacatcatcaaagatggcaag
ctggccgtggtggcggatgacggggtgacgcagtttgtagtcctaggtgagggaagctat
tttggggagatcagcatccttcaaatcaagggcagcaaggcgggcaaccgcaggacggcc
aacatccgcagcgttggctactcagatctcttcctcctctccaaagatgacctgatggag
gcgctcactgagtaccccgatgccaaggccatgctggaggacaaaggtcggcagatcctc
atgaaggacaacctgatcgagctcgacccgtccaagttgaagccagacgagaaggacctg
gagggcaacgtgaaccgtctgttcagcaacatagagatgttgaagggtaaactctccaag
gtgatgaaggaccacaaaggggcacggaaggcattgaaggaacgcatctcccaaattgaa
cgcactatgaagtccataatgcaggaaaatattactaagattgtttctgagtgggaaatg
gttgtgttcacacaggggctatttgccctccagaggtatcttcatgcaggctgggtagct
ggcaagtgctgcatcagtgagtatccactggagactggagaaatagaggagactggcgga
aagaccacctgcacctga
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