Sardina pilchardus (sardine): 134098502
Help
Entry
134098502 CDS
T10667
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04517
IgSF CAM signaling
spil04520
Adherens junction
spil04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134098502 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134098502 (afdna)
04530 Tight junction
134098502 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
PDZ_6
RA_2
FHA
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
134098502
NCBI-ProteinID:
XP_062407542
LinkDB
All DBs
Position
12:9144663..9270306
Genome browser
AA seq
1962 aa
AA seq
DB search
MGSREEERRKLADIINHWNANRLDLFEISQPTEELEFHGVMRFYFQDRVAGNFATKCIRV
SSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERKLDLDEKPLVVQLNWNKDD
REGRFVLKNENDIIPKKTQINGPEREKEGVIQNFKRTLSKKEKKKEKKKDKEAFARIPDG
DESALNREDGENSRLAVEVYKEMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRNNDGR
PDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAEALEKYGLEKENPRDYCIARVVHS
EDKPVKETILDDAECPLQIFRDWTSDKEALVFQLKKRPPDYVPKKGHKPADRRGSVPPEK
LPYLVELSPGRGNHYGYYAYRHHEDGSDSRDKPKLYRLQHSVTEVGSDCTDDGSIQLFGP
GVLPHHCNLLHADGLVTVTPATPEAETLVDGQRVVDTTLLRSGATLQFGHAHVFKFVDPA
QEQLAGKREPGPMMQGRHKSGSVPETAFDPHGDIHGSGLPTSKSSGKLDMERAGNGSERG
MVKPMIRGEQQDFSKHDGRSLDGLGPELTLPASIEFRENSEDAFLSAIINYTNSSTVHFK
LSPTYVLYMTCRYVMSSHYRPDISPSERTHKVIAIVNKMVSMMEGVIQEVADGDQKQKNI
AGALAFWMANASELLNFVKQDKDLSRVTLDAQDVLAHLVQMAFKYLVHCLQADLNNYMPA
FLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVT
EADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQ
NINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLE
EDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRGFCRLTPHPRSPGTWTVYFEGA
DCDSHFSADTSELPMRKDPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGAA
DMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQP
SPMMPRANDRSRDKGKLRPKSEGFELYNNTVQNGSSESPQGNWDNYPEPKKMGGEERLLK
NRADHRSSPNVANQAQSPGGKPVYPGGPGKITSVSTGNLCADEEPSPPRPEAYPIPTQTY
PREYFTFPASKSQDRVGPSPNQPWQDNEDRPPMEVHHNNNMSMQRVAHSQEELCDVPGGY
LQQQQHPDYQRGSGEHWNQQVSSSLESSTSSQEHLNYSNASVGSGGKGPSNHKSGPGRWK
TPGPPPGPHSQPTRTDLPPPPPPPPAHYDYEPQPEMPLPPPPVSQQQHQQQQQHQQHQQQ
QAAAAAAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQIRGAPGPGPAHGQH
GTLPHMPPPQHHHHPHNMPPPAGPGPMQMPPPQQQQQPPYMPPQPQPPQSQPMAAPAPPM
RPEKLSSLPRGMSAPSGPPPPGGDTVIRDLLPQQQPRTIERRDLQYITISKEELSASDSL
SPDPWKRDAREKLEKQQQLQIVDLLDREIQELQAKPERTAEESDRLRKLMLEWQFQKRLQ
ESKQSDDDEDEEEDDEDDVDTTLIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAK
QEEERRWREEERARREAEEKRRQEEEYYNRLEAERRRQHEEAERKLLTPDEPGLYRPPLP
KDYQPPPPASPANTANTNHSNSSAPPPPPQRNTSYLKTQVASPDTLYTAKFVSYNDEEDE
DEDAGPAGQVKLSATRKSYGDLPPAAHKPQPPPLARKPRPMSDGIFLSSQFHLPADNANS
TTGRTGHAPPLPSTKPNFIPPPNSKAGFNSYTGNTTGLVGSGEVYKEKWIKSVPEQDNTI
AGNPESLTFKERQRLFSQGKEVSNKVKASRKLMELENELNTK
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagggaagaggaacggcgaaaactcgccgacatcattaaccactggaacgcc
aaccggctcgacctgttcgagatcagtcagccaacggaggagctggagttccacggcgtg
atgcgcttctacttccaggaccgcgtggcggggaacttcgccaccaagtgcatccgggtg
tccagcacggccaccacgcaggacgtcatcgagacgctggccgagaagttccggccggac
atgcgcatgctctcctcgccgcgctactccctctacgaggtgcacgtcagtggggaagaa
cggaagctggacctggacgagaagccgctggtggtgcagctgaactggaacaaggacgac
cgcgagggccgcttcgtgctcaagaacgagaacgacatcattcccaagaagacacagatc
aatgggcccgagagggaaaaagaaggcgtcattcagaacttcaaacggacgctgtccaag
aaggagaagaaaaaggagaagaagaaagacaaggaggccttcgcccgcatcccagatgga
gatgaaagtgcactcaacagagaggacggggagaactcgcggctggcggtggaggtgtac
aaggagatgccggagacgagcttcacgcggaccatctccaaccccgaggtggtcatgaag
aggaggaggcagcagaagctggagaagaggatgcaggagttccgcaacaacgacggacgg
cccgactcaggcgggacactgcggatctatgcggacagcctgaagcccaacatcccgtat
aagaccatcctgctgtccaccacagacacggccgacttcgccgtagccgaggcgctcgag
aagtacggcctggagaaggagaaccccagagactactgcatcgctcgggtggtccactct
gaagacaaaccagtgaaggagaccatcctggacgacgcggagtgcccactgcagatcttc
cgcgactggaccagtgataaagaggccttagtgttccagctgaagaagagacccccagat
tacgttccaaagaagggccacaagccagccgacaggcgtggctcagttcccccagagaaa
ctgccctacctggtagagctcagtccagggcgcgggaaccactatggctactacgcctac
cgccaccacgaagacggctccgactcgcgggataagcccaagttgtaccgcctccagcac
agcgtcactgaggtgggctccgactgcactgacgacggctccatacagctctttggtccg
ggcgtcctcccccaccactgcaacctgctgcacgccgacggcctggtgacggtgaccccg
gcgaccccggaggcggagacgctggtggacgggcagcgggtggtggacaccacgctcctg
cgctcgggcgccacgttgcagttcggccacgcgcacgtcttcaagttcgtggacccggcc
caggagcagctcgctggcaagcgcgagccggggcccatgatgcagggccgccacaagtcc
ggcagtgtcccggagacggcctttgacccccacggggacatccacggctccggactcccc
accagcaagagctcagggaagttggatatggagcgtgcggggaatggcagtgagaggggc
atggtgaagccaatgatccgcggggagcagcaagacttcagcaagcatgacggcaggtcc
ctggacggcctgggccccgagctcacgctgccggccagcatcgagttccgggagaactcg
gaggacgccttcctgtcggccatcatcaactacaccaacagctccacggtgcacttcaag
ctgtcgcccacctacgtgctgtacatgacctgccgctacgtcatgtccagccactaccgg
cccgacatcagcccgtccgagcgcacgcacaaggtcatcgccatcgtcaacaagatggtg
agcatgatggaaggagtcatccaggaggttgctgacggtgatcagaagcagaagaatata
gcgggcgctctggccttctggatggccaacgcctccgagctgctcaacttcgtcaagcag
gacaaggacctgagccgcgtcaccctggacgcacaagacgtgctggcccacctcgtgcag
atggcgttcaagtacttggtccactgcttgcaagctgatctcaacaactacatgcctgct
ttcctggatgacccagaggagcagaacccccagagacctaaaatagaggacgtcctccac
acgctgacgggcgccatgtccctcctgcgccgctgccgagtgaacgcggcgctgaccatc
cagctgttctcccagctgttccacttcatcaacatgtggctcttcaacaagctggtgacg
gaggccgactcgggcctgtgctcgcactactggggcgccatcctgcgccagcagctcagc
cacatcgaggcctgggccgagaagcagggcctggagctggccgccgactgccacctcagc
cgcatcgtgcaggccaccaccctgctgaccatggataagtactccatgcaggacgtgcag
aacatcaacaacacatgcttcaagctcaactcactacagctcaacgccctcctcagcaac
taccactgtgcccccgacgagccttacatccccccggagctgattgaccatgtggtggcg
gtggcagagaacacagcagacgagttggcgcggagcgacgggcgcgaggtgcagctggag
gaggaccccgacctgcagctgcccttcctgctgcccgaggacggctactcgtgcgacgtg
gtgcgcaacatccccaacggcttccaggagttcctggagcccctctgccagagaggcttc
tgtcgtctgacccctcatccccgctctcccggcacctggaccgtctacttcgaaggagcc
gactgcgacagccacttctccgccgacacctctgagctgccaatgcggaaggatccggaa
atcgtgacggtcacgctcaagaagcacaatggcatgggcctcagcatcgtggctgccaag
ggcgctggccaggacaagctgggcatctacatcaagtccgtggtcaaaggaggagctgca
gacatggacgggcgtctggctgcaggagatcagctgctgagtgtagatggcagaagtttg
gttggtctctcccaagaaagggcggctgagttgatgacccgcacaggttccgtggtgacc
ctggaggtggccaagcagggtgccatctaccacggcctggccacactcctcaatcagccc
tcccccatgatgcccagagcgaacgaccgctctcgggacaagggcaagttgcgaccaaag
agtgagggcttcgagctctacaacaacacggtgcagaacggctccagcgagagcccccag
ggcaactgggacaactacccagaaccaaagaagatgggcggcgaggagcggctgctgaag
aaccgcgcggaccaccgctccagccccaacgtggccaaccaggcccagagtccaggagga
aagcccgtgtaccctggaggaccagggaagatcacctccgtctccactggcaacctctgt
gctgatgaggagccgtctccccctcgcccagaggcctaccccatccccacccagacctac
cccagagagtacttcacgttcccggcctccaagtctcaggaccgggtggggccctcgccc
aaccagccctggcaggacaacgaggacaggcctccgatggaggtccatcacaacaacaac
atgtccatgcagagagtggcccactcccaggaggagctgtgcgacgtgccgggcggctac
ctgcagcagcagcagcacccggactaccagcgcggcagcggcgagcactggaaccagcag
gtgtcgtcctccctggagtccagcacgtccagccaggagcacctcaactactccaacgcc
tcggtgggctccggcggcaagggccccagcaaccacaagagcgggccaggccgctggaag
accccgggccccccgccgggcccccactcccagcccacgcgcaccgacctgccccctcct
ccgccgcctcccccagctcactacgactacgagccccagccggagatgccgctgccgcct
ccgcccgtctcccagcaacagcatcagcagcagcagcagcatcagcagcatcagcaacag
caggcggctgctgcagctgcggccgccgccgaccgcaagaagcgcgaggagcagcagcgc
tggtacgagaaggagaaggcgcggctggaggaggagcgcgagcgcaagcggcgcgagcag
gagcgcaagctgggccagatccgcggcgcccccggcccgggcccggcgcacggccagcac
ggcaccctgccccacatgccgccgccgcagcaccaccaccacccccacaacatgcccccg
ccggccggccccgggcccatgcagatgcccccaccacagcagcagcagcagccgccctac
atgcccccacagccccagccgccgcagtcccagcccatggcggccccggcgcccccgatg
cggcccgagaagctgtccagcctgccgcgcggcatgtcggccccgtccggcccccctccg
cccggcggcgacacggtgatccgcgacctcctgccgcagcagcagccgcgcaccatcgag
cggcgcgacctccagtacatcaccatcagcaaggaggagctgtcggccagcgactcactc
tcgcccgacccgtggaagcgcgacgcccgcgagaagctggagaagcagcagcagctgcag
atcgtggacctgctggacagggagatccaggagctgcaggccaagcccgagcgcacggcc
gaggagagcgaccgcctgcgcaagctcatgctggagtggcagttccagaagcggctgcag
gagtccaagcagagcgacgacgacgaggacgaggaggaggacgacgaagacgacgtggac
accaccctcatcatgcagaggctggaggccgagaagcgagcacggttgcaggacgaggag
cggaggaggaagcagcagctggaggagatccgcaagcgggaggctgaggaccgggccaag
caggaggaggagagacgctggcgggaggaggagagggccaggcgagaggccgaggagaag
aggagacaggaggaggagtactataaccgcctggaggcggagaggcgccggcaacatgaa
gaggccgagcgcaagctgctgacccccgatgagcctggtctgtacagaccgcccctcccc
aaggactaccagcccccccctcccgcctctcccgccaacacagccaacactaaccacagc
aacagcagtgctccaccacccccccctcagagaaacacctcttacctcaaaacccaggtc
gcctcccccgacaccctgtacactgccaagtttgtctcgtacaatgacgaggaggatgag
gatgaggacgctggcccagcaggtcaggttaagctttccgcgacccggaagtcatacggc
gacctcccacccgccgcgcataagccacagccgccgcccctcgcgcgaaagccccgtccc
atgtccgacggcatctttctgtccagtcagttccacctgcctgctgacaatgccaacagt
actaccggccggacaggccacgcgcctccactcccctccaccaaacccaacttcattcca
ccacccaattctaaagcaggatttaattcgtacactggaaacacaacagggcttgtagga
tcgggagaagtttacaaggaaaagtggattaaaagtgtgccagagcaggacaacacgatc
gcaggtaaccccgagagcctcacatttaaggaacgccagcgtctattctcccagggaaag
gaggtgtccaacaaggtcaaggcctcacggaaactgatggagctggagaatgaactgaac
acaaagtag
DBGET
integrated database retrieval system