KEGG   Sardina pilchardus (sardine): 134098970
Entry
134098970         CDS       T10667                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spil03041]
    134098970
Spliceosome [BR:spil03041]
 Complex B
  Other components
   Complex B specific factors
    134098970
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_NWD2_C LisH_TPL WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd VPS8_N Beta-prop_LRRK2 Beta-prop_NOL10_N DUF7165 LisH_PAC1
Other DBs
NCBI-GeneID: 134098970
NCBI-ProteinID: XP_062407664
LinkDB
Position
2:28163014..28172634
AA seq 503 aa
MQYLKENNLHRTLATLQEESTVYLHTVDSIDSFISDINNGHWDAVLLAIQHLKLPCNILI
DLYEQVVLELIELKEVGAAQSMLRQTDPMIYLKQTEPDRYIHLENLSTRPYFDPREAYPD
GSSKEKRRMAVAHALAAEVSVVPPSRLLGLLAQSVKYQQTQDVLHPGMAIDMTQCNGTVC
NGVKDSDEEHVPAQLICHIQFGPKSHVECARFSPDGQYLITGSVDGFVEVWNYTTGKIRK
DLKYQAQDNFMMMEDAVLCLAFSHDSEMLASGAQDGKIKVWRIQSGQCLRRFERAHSKGV
TCLNFCKDNGQLLSASFDQTIRIHLLKSGKTLKELRGHTSFVSEAIFSKDGNHIISASSD
GIIKIWNVKTCECTSTFKSPGSSAGVDVMVNNMFLLPKNPEQFVVCNRSSTVVVMNMKGQ
IVRSFSSGKREGGDFVCCTLSPHGEWIYCVGEDLVLYCFSTLTGRLERSLTVHDKDVIGI
THHPHQDILATYSEDGLLKLWRP
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgcaatacctgaaagagaacaacttgcaccgcacgctggctacgctgcaggaggagagt
accgtataccttcacacagtggatagcatcgatagcttcatctcagatataaacaacggt
cactgggatgcagtgttactggctatccagcatctcaagctaccctgcaacattctcatt
gacttgtatgagcaggtggttttggaacttattgagctgaaagaagttggagcagcccag
tcaatgctgcggcaaacagaccccatgatttacctgaaacagacagagccggacagatat
atccacctggagaacctttcaacgcgtccgtactttgaccctcgggaggcgtacccagat
ggcagtagcaaggagaagaggaggatggcagttgcccacgccttggcagcagaggtcagc
gtggtccctccctcacgcctcttgggacttcttgcgcagtcggtgaaataccagcagact
caggacgtgctgcatcctggcatggctatagacatgacacagtgcaacggaaccgtctgc
aacggagtgaaggacagcgacgaggagcacgtccctgcacagctcatttgccacattcag
tttggaccaaagtctcacgtggagtgtgcgcggttctctcctgatggtcagtatctcatc
actggttctgttgacggcttcgttgaggtgtggaactacaccactggaaagatccggaag
gatctaaagtaccaggcccaggacaacttcatgatgatggaggatgcagtgttatgtttg
gccttcagccacgactctgagatgttagcgtctggggctcaggacggcaagatcaaggtg
tggaggattcagagtggacagtgtctgcggaggtttgagcgcgctcacagcaaaggagtg
acttgtctcaacttctgcaaggacaacggtcaactgctcagtgcttcctttgatcagacc
atcaggattcatttgctgaaatcgggcaagacactgaaggagttgaggggccacacgtcc
tttgtcagtgaagcgatattctcgaaggacggcaaccacatcatcagtgcgtcctcagac
ggcatcatcaagatttggaacgtgaagacgtgcgaatgcaccagcacgttcaaatcgcca
ggctcgtcggcaggagtggacgtcatggtcaacaacatgttcctgttgcccaagaacccc
gagcagtttgtggtgtgcaaccggtccagcaccgtggtggtcatgaacatgaagggacag
attgtgaggagtttcagctcgggtaaaagagaaggcggggactttgtgtgctgcacgttg
tctccgcatggcgagtggatctactgtgtgggcgaggacctggtgctgtactgcttcagc
acgctcaccggcaggctggagaggagcctcacggttcatgataaagacgtgatcggcata
actcatcaccctcatcaggacatcctcgccacctacagtgaagacggcctgctgaaactc
tggaggccctaa

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