Sardina pilchardus (sardine): 134099070
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Entry
134099070 CDS
T10667
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134099070 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134099070 (dhx36)
03012 Translation factors [BR:
spil03012
]
134099070 (dhx36)
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134099070 (dhx36)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134099070 (dhx36)
Translation factors [BR:
spil03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134099070 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
AAA_16
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
134099070
NCBI-ProteinID:
XP_062407756
LinkDB
All DBs
Position
13:complement(4956207..4982229)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSYGYGGRRGRRGGRRFGDGNEERWERGAGPSSGGYQRNSGWESREEHGRGGGGGPRGKH
PPHLKGREIGLWYAKMGGAKRSEQERKSRAVVQMDQSREQHITELLNSVQRVPPGASMDT
GASTSQSWRSKPQESHHSYFDGDEPPEEIPETKPVIKEIKQENETRKETTWDKDLEFLFQ
DIIRKPSLDQELKKDLQIKRADAKYLDMLKFREKLPSYGMREELVQLIQTSQVVVVSGET
GCGKTTQVTQFILDDYIERDMGSLCRVVCTQPRRISAISVAERVSAERAESVGNGNSCGY
QIRLQSRLPRKQGSVLYCTTGIILQWLRSDSHLSSISHLVLDEIHERNLQSDVLLTIVKD
LLSVRDDLKVILMSATLNAEKFSKYFGNCPMIHIPGFTYPVQEYLLEDVVEMIRYRPQKK
ERRPRGKRGFMHGQVARPEKEQKEAEYQESWPCYARTLRDKYSDSTIDVMEMMDDDDRID
LDLIAALIRHIVMNEDDGAILVFLPGWDNISGLNDLLMAQQMFKSDKFVIIPLHSLMPTV
NQTQVFKRPPHGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTPEWV
SLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKILKLGSI
ASFLLKALDPPSEKAIELAIRHLMDLNALDKEEELTPLGIHLARMPVEPHIGKMILFGAL
LGCLDPVLTIAASLSFKDPFFIPMGKEKLADNRRRVLSKNSKSDHLTIVNAFWGWQDAKQ
RGYRHEKDYCWDNFLSANTLQMLHNMKGQFAEHLLTAGFVSCKDPRSPSANINSENEKII
KAVIVAGLYPKVAKIRPSHNKKRPAPAKVYTKADGKVCIHPKSVNAEEREFRYTWLIYHL
KMRTSSIFLYDCTEVSPFSLLFFGGDISIQKDQDQETIAVDEWIVFQSPARIAHLVKNLR
KELDFLLEEKIKNPKPVDWSDRSSKDCAVISAIIDLLTTQEADSRSGHTDWSAAPRDDDR
YDY
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggttatggtggcaggagaggacgaagagggggtcgcaggtttggcgatgga
aacgaagagagatgggagcgtggtgcagggccgagtagtggaggttatcagaggaactcg
ggctgggaatcacgggaggaacatggacgtggaggagggggtggcccacggggtaaacat
cctccacatctgaaaggcagagagattggcttatggtacgccaaaatgggtggtgcgaaa
agatccgaacaggagaggaaatccagggccgtggttcagatggatcagtctagagagcag
cacatcactgaactactaaattcggttcaacgagtgccccccggagctagcatggacact
ggcgcatccacctcacagtcctggaggtctaagcctcaagagagccatcacagttacttt
gatggagatgaacctcctgaggaaatacctgaaacaaaaccggtaattaaggaaatcaag
caagaaaacgagacaagaaaagaaactacctgggacaaagaccttgaattcctgtttcag
gacataatacgcaagccatcccttgaccaagagctcaagaaagacctgcagataaaaagg
gctgatgctaaatatctagatatgttgaaattccgggaaaagcttccatcatatggaatg
agagaggagctggtccagctaatccagaccagccaggttgtggtggtcagcggggagact
ggctgtgggaagaccactcaggtcacgcagtttatcctggacgattacatcgagagagac
atgggctctctctgcagggtggtctgcacccagccacgccggatcagcgctatctcggtt
gcagagagagtgtctgcggagcgggctgagagtgtgggcaacggcaactcttgtggctac
cagatccgactgcagagccggttaccacggaaacaaggctctgttttgtattgtacgacg
ggcattattcttcagtggctccgctccgattcacacctgtccagcattagccacctggtt
ctggatgagatccacgagcgaaacctacagtctgacgttctcctcaccatcgtgaaggac
ctgctgtcggtccgggatgacctgaaagtgattctcatgagtgctacgctcaacgcagag
aaattcagcaagtactttggtaactgcccaatgatccacattcctggcttcacatacccg
gtgcaggagtacctgctggaggatgtggtggagatgatcaggtaccggccgcagaagaag
gagcgcaggcccagggggaagaggggcttcatgcacggccaggtggcgcggccagagaag
gagcagaaggaggccgagtaccaggagagctggccctgctacgcacgcaccctcagggac
aagtactcggacagcaccattgacgtaatggagatgatggatgacgatgacagaatcgac
ctggatttgatcgcagcactcatccgacacattgtgatgaatgaggatgatggagccata
ctggtcttcctcccggggtgggacaacatcagtggtcttaatgacctccttatggctcag
cagatgttcaagtcagataagtttgtgataattcccctccactctctcatgcccacggtc
aaccagacccaggttttcaaaagacccccacatggagtgcggaagattgtgatcgccact
aacattgctgaaaccagcatcaccatagacgacgtggtgtacgtcatagacggaggcaag
attaaggagacccactttgacacgcagaacaacatcagcaccatgacgccggagtgggtg
agcctggccaacgccaagcagaggaaggggcgcgctggcagggtgtctccagggaagtgc
taccacctgtacaacggcctgcgggccagcctgctggacaactaccagctgcctgagatc
cagcgcaccccactggaggagctgtgcctgcagatcaagattctcaagctgggctccata
gcctccttcttgcttaaggctctagaccctccctcagagaaggctatcgagctggccata
agacacctcatggacctgaacgctctggacaaagaggaggagctgacccctctgggtatc
cacctggcgcggatgccagtggagccgcacatcggcaagatgatcctgttcggagcgctg
ctcggctgcttggacccggtgctcaccatcgccgccagcctcagctttaaagaccccttc
ttcattccaatggggaaggagaagctggccgacaacaggaggagagtcctctccaagaac
tccaagagtgaccatctcactattgtcaatgccttctggggctggcaggatgccaaacaa
cggggctacagacatgagaaagactactgttgggacaacttcctatccgccaacactctc
cagatgcttcacaacatgaagggccagtttgcagagcacctgctgactgccggctttgtc
agctgcaaggaccccagatcccccagcgcaaacatcaactcagagaatgagaaaatcata
aaagcagtcattgtagctggtttgtatccgaaggtggccaagatccgtcccagccacaac
aagaagaggcccgcgccggcaaaggtgtacaccaaagcggacgggaaagtgtgtatccac
cccaagtctgtgaacgcagaggagagagagttccgctacacgtggctcatctaccacttg
aagatgaggacgagcagtatcttcctgtacgactgcaccgaggtgtctccgttctccctg
ctcttcttcggaggggacatctccatccagaaggaccaggaccaggagaccatcgccgtg
gacgagtggatcgtcttccagtcccccgcgcggatcgcccatctagtcaagaacctaagg
aaggagctggacttcctcctggaggagaagatcaagaacccaaagccggtggactggagt
gaccgcagctctaaagactgtgcggtcatctcggccatcatcgatctgctcaccactcag
gaggccgacagcaggagcggccacacagactggagcgctgcccctagggacgacgaccgg
tatgactactga
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integrated database retrieval system
