Sardina pilchardus (sardine): 134099326
Help
Entry
134099326 CDS
T10667
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04140
Autophagy - animal
spil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134099326 (hif1al)
04137 Mitophagy - animal
134099326 (hif1al)
04148 Efferocytosis
134099326 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134099326 (hif1al)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134099326 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
SR-25
DUF3446
Motif
Other DBs
NCBI-GeneID:
134099326
NCBI-ProteinID:
XP_062408120
LinkDB
All DBs
Position
13:complement(30054752..30078310)
Genome browser
AA seq
667 aa
AA seq
DB search
MKAAPEPKGMSSELRKVRSRDAARSRRGQETEVFYELAHSLPLPRRVASHLDKAAIMRVA
LSYLRMQRILATDEASVEEQKESEEEATDELYQHAIDGFIMVMTEDGDMIFLSDSVNKHL
GITQLELLGQSAYDFVHPCDQEELRDLLALRTASLKKSRSEKQTERSFFLRMKSTLTSRG
RTVNIKSASWKVLHCTGHMLPYRAEGETAPPVGGYMTLLCEPIPHPSSVEFPLDCSTFLT
RHNMDLGFTQCDGRVTELVGYEPEDLIGRSAFEYYHALDFDHVSKSLHILLSKGQVSTRH
YRFLAKSGGFVWAETKATVIYNSKTSQPEAVVCLNFILSGVEQAEVVFSAEQTRSTVCPA
LAAGVKTELAEMEKEPPPSSSSSSSSSSSSSSSSSGELFLRLKENPEELLQLAPTAGDTI
VPLTDSADLSFYRPEAPDSLPDSPEELCSPELRQLLSPIFDQPTSPAATLVRARLAHQLS
PVSEGPMDTGKVEQFFAIKLDSGDQNTEITDEMDLDMLAPYISMDDDFQLTALTHLAEAD
RLSLPPPALGPAPPAPPAPPAPSRKRAYEVKEDLPSLVQKWEKRQRNSPIEEELLLTHNM
LNYLIDSECPDDLDLMSGQRSKLLTDRDPILGATPGLCDSMTLMKDPFLLRPPDPVGRDL
GHISPLT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgctcctgagccgaaagggatgagctcggagctgcggaaggtgcgctcgcgt
gacgcggcgcggagtcggcgtggccaggagacggaggtgttctacgagctggcccacagc
ctgcccctcccccgccgcgtcgcctcccacctggacaaggccgccatcatgcgcgtggcg
ctcagctacctgcgcatgcagcgcattctggccacagacgaggcgagcgtagaggagcag
aaggagagtgaagaggaggccactgatgagctgtaccagcacgccatcgacggcttcatc
atggtgatgaccgaggacggggacatgatcttcctgtccgacagcgtcaacaagcacctc
gggatcacgcagctggagctgctgggccagagcgcttatgacttcgtccacccctgtgac
caagaggagctacgggacctgctggccctcagaacagcttccctgaagaagagtcggagt
gagaagcagacggagcggagcttcttcctgaggatgaagagcacgctgaccagccgagga
agaaccgtcaacatcaagtctgcctcctggaaggtcctccactgcacgggccacatgctg
ccctacagggccgagggagaaacagcgccccctgtgggcggctacatgacactgctgtgc
gagcccatccctcacccgtccagcgtggagttcccactggactgcagcaccttcctcacg
cgccacaacatggacctcggcttcacacagtgcgacggcagagtcaccgagcttgtgggc
tacgaaccggaggacctgattggtcgatcagcgttcgagtactatcacgctttggacttc
gaccacgtgagcaagagccttcacattttgctgtccaagggccaggtgtccaccagacac
taccgcttcctggccaagagcgggggcttcgtgtgggccgagaccaaggccacggtcatc
tacaacagcaagacctctcagccggaggccgtggtctgcctcaacttcatcctcagtggg
gtggagcaggcggaggtggtgttctcggcggagcagactcgctccacggtgtgccccgct
ctagcggcgggtgtgaagacggagctggcggagatggagaaggagccacctccttcctct
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctcaggggagctgttcttg
cggctgaaggagaacccagaggagctgctgcaactggcccccaccgccggagacaccatc
gtccccctcacagactctgctgatctgtccttctaccgcccggaggcaccggactcactc
cccgactcccccgaagagctctgcagccccgaactccgccagctcctctcccccatcttc
gaccagcccacgtctccagcagccacgctcgtaagggcccgtctcgctcatcagctgagt
ccagtcagtgaagggcccatggacactggcaaggtggagcagttcttcgccatcaaactg
gacagtggagaccagaacacagagattacggacgagatggatctggacatgctggcccca
tacatctccatggacgatgacttccagctgacggctctgacgcacttggccgaggcagac
cgcctcagcctgccccccccagccctgggccccgcccccccggcccccccggcccccccg
gccccatccaggaagagggcctatgaggtgaaggaggacttgccctctctggtgcagaag
tgggagaagcggcagaggaacagccccatagaggaggagctgctgctgacccacaacatg
ctgaattatttgattgactctgagtgtcccgatgacttggatctgatgtcggggcagcgc
agcaagctgttaactgaccgagaccccatcctgggagccacgcccggattatgtgactcc
atgactctgatgaaagacccgtttctcctccggccacctgatccagtgggacgagacctc
ggccacatctcccccctcacctga
DBGET
integrated database retrieval system
