Sardina pilchardus (sardine): 134099474
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Entry
134099474 CDS
T10667
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03250
Viral life cycle - HIV-1
Brite
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134099474 (supt5h)
RNA polymerase I system
134099474 (supt5h)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
134099474 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134099474
NCBI-ProteinID:
XP_062408341
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All DBs
Position
13:1731112..1764186
Genome browser
AA seq
1089 aa
AA seq
DB search
MSDSDDSDFSDNHSEHSSEAEEVEENEEEEGAGSVAGSDKGEEEGEDLDEEDYDEEEEEE
DDDRPRKKPRHGGFILDEADVDDEYEDEEDPWEEGAEDILEKEEAEASNLDHVVLDEDHS
GSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHFYGGSEDLSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVESYKQTHVKAAIE
GVGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQ
NTISLKLIPRIDLDRIKARMSMKDWFAKRKKSKRPPQRLFDAEKIRSLGGEVTHDVEFMI
FEGNRYSRKGFLFKTFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETTGKEKEHNL
QAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKV
IAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELV
QLEPQTVGVIVRLERETFQVLNMHGKVQTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHVVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPGGGAGVQRGGGGGGGGGGGGGMGRGRGRRDNDLIGQTVRISQGPY
KGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGAKRHGGMTSTHGRTPMYGSQTPM
YGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRADDDYE
FGYDDEPSPSPQGYGSTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPS
PQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGA
PSPGGYNPHTPGSNIDQTSCDWVTTDILVRVKDTFLDGGVVSQTGVIRSVTGGMCSVFLQ
DTEKVVSISSEHLEPITPTKNNKVKVILGEDREASGVLLSIDGEDGIVRMELDEQLKILN
LRFLGKLEV
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagcgacgacagtgatttctctgacaaccacagcgaacatagcagcgaagca
gaggaggtagaggaaaatgaggaagaggaaggggcaggaagtgtagctggcagtgataaa
ggagaagaggaaggggaggacctggatgaggaggattatgatgaagaagaggaagaagag
gatgacgaccgacccaggaaaaaaccacgtcatggtggcttcatcttagatgaagccgat
gtggatgatgagtatgaagacgaagaggacccttgggaggaaggagcggaagacattttg
gagaaagaggaggcagaggcttctaacctggaccatgtggtactggatgaggatcactca
gggtctcgcagacttcagaacttatggagagactcaagagaagaggccttaggagagtac
tacatgagaaaatatgccaagtcttcaggaggagaacatttttatggaggttcagaggat
ctgtctgatgacattacccagcagcagcttcttcctggtgtcaaagatcctaacttatgg
accgtcaaatgtaagattggagaggagagggccactgccattgccctgatgaggaagttc
attgcttatcagtttactgacacgcccctccaaatcaagtcagtagttgctcctgagcat
gtgaaaggctacatttatgtggagtcttacaagcagacccatgtaaaggctgctatagag
ggtgtcggaaacttgcgcatgggcttctggaaccagcagatggtccccatcaaagaaatg
actgatgtgctgaaggtagtgaaagaagtgactaatctcaagcctaagtcctgggttcgc
ctgaagagaggcctctataaagacgacattgctcaagttgactatgttgaacctagtcag
aacaccatatcactgaaactgatcccacgaatagatctggaccgcattaaagctcgcatg
agcatgaaagattggtttgccaaaaggaagaagtctaagaggcctcctcagaggttgttt
gatgctgaaaagattaggtctcttggaggggaagtgactcatgatgtggagttcatgatt
tttgaaggaaaccgctacagccgtaaaggtttcctcttcaaaacgtttgccatgtctgct
gtgattactgaaggtgtaaaacccactctgtctgaactggaaaagtttgaggatcagcct
gagggaattgatttggaggtggtcacagaaaccacaggtaaggaaaaggagcataatctc
caggctggggacaacgtggaggtgtgtgagggtgagctgatcaacctccagggaaaaatc
ctcagtgtggatgggaacaagatcacaatcatgcccaaacacgaagacctcaaggaccca
ctggagttccctgcacatgagttgaggaaatacttccgcatgggtgatcatgtgaaggtg
atcgcagggcgctatgaaggtgacacaggactcattgtgcgagtcgaagagaattttgtc
atcctcttctctgacctcaccatgcatgagttgaaagttttgccacgagatctccagtta
tgctcagaaacggcctctggagttgatgcaggcgggcagcatgagtggggagagctggtg
cagctggagccccagactgtaggagtgattgtcaggctggaacgagagaccttccaggtg
ttgaatatgcatggtaaagtgcagacagtgcgccaccaggcagtgaaccgacgcaaggac
aaccgctttgctgtggccttggactctgagcagaacaacatccatgtgaaggacattgtg
aaagtcatcgatggacctcattcggggcgtgaaggagagatccgtcacctattccgagga
ttcgccttccttcattgtaagaagctggttgaaaatggtggcatgtttgtttgtaagacg
cgtcacgtagttctcgccggtggttccaagccccgagatgtgactaatttcacggttggt
ggttttgcacccatgagtccccgcatcagcagccccatgcatcctggtggtggagcaggc
gtgcaaaggggtggaggtggaggaggaggaggaggaggaggtggaggaatggggcgtggt
cgaggaagacgtgacaatgatctaattggtcaaactgtcaggatttctcagggaccctat
aaaggttacattggggtcgtcaaagatgccacggagtctacagctcgtgttgagctgcac
tccacatgccagaccatctctgttgatcgtcagcgactcaccactgttggtgcaaagagg
catggcggcatgacttctacccatggccgtacccctatgtatggctctcagacccccatg
tacggcactggctctcgcacacccatgtatggcagccaaacgccgctgcatgacggcagc
agaacgccccattatggttctcagaccccactgcatgatgggagcagaacaccgggccaa
agtggagcgtgggaccccaacaaccccaacacaccatcacgtgcggatgatgactatgag
tttggatatgatgatgagccatcaccatcccctcagggctacgggagtacccccaaccct
caaacaccaggctacccagaggtgccctcaccacaggtcaaccctcagtataacccccag
acgccaggaacccctgcaatgtacaacaccgaccagtattctccttatgctgcaccgtcc
cctcagggctcctaccagcccagcccaagccctcagagttaccaccaggtggctcccagt
cctgtaggataccagaatactcactcacctgccagttaccatcccacaccttctccgatg
gcctatcaggccagtccaagccccagccctgtgggctatagtcctatgactccaggggct
ccttctcctggcggctataacccccatactcctgggtcaaatattgaccagacctcctgt
gactgggtcaccacagacattttggtgcgggtcaaggacacattcctagatggaggtgtg
gtcagtcagactggcgtcatccgaagtgtcacgggcggcatgtgctctgtgttcctgcag
gacactgagaaagtggtcagcatttccagtgaacacctggaacccatcactcccaccaag
aacaacaaggtgaaggtgattctgggagaggatcgagaggccagtggcgtcctgctcagc
attgatggagaagatggcattgtccgaatggagcttgacgaacagctgaagattcttaac
cttcgctttcttggaaagctggaagtttga
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