Sardina pilchardus (sardine): 134099510
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Entry
134099510 CDS
T10667
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134099510 (cdh12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134099510 (cdh12a)
Cell adhesion molecules [BR:
spil04515
]
Cadherins
Major cadherins
134099510 (cdh12a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Phage_holin_3_6
Stevor
Motif
Other DBs
NCBI-GeneID:
134099510
NCBI-ProteinID:
XP_062408387
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Position
2:35849773..35873514
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AA seq
780 aa
AA seq
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MGKEHHRNLRRHGFSGAQRVKRGWVWNQFFVLEEYMGSEPQYVGKLHTDMDRGDSLVKYT
LSGEGVGSIFTIEPTTGDIHALRSLDREEKPYYTLRAQAVDMRTGRPLEPESEFVIKVQD
INDNEPKFLGGPYAATVPEMSPVGTYVTQVTASDADDPTYGHSARIVYSIIHGQPYFSVD
SKTGIIKTALPNMDREVKEVYQVLIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFTKS
IFHLRVPESSPIGSAVGKIVAHDLDDGKNARVEYSIVPGDGGTMFDIVTNELNQEGTVIL
KKRLDYETRKAYTFKVEASNVHLDPRFLHQGPFKDTATVKVNVLDVDEPPVFSKPHYSME
AYEDTPVGIIVGAVRAQDMDVGNSPIRYSIDWKRDLEHAFDIDPVEGLITVSEFLDRETV
ARHNITVVATKVNNPLLFSKVGVTITVLDVNEFAPELVIPPETIVCESAKVGQVIQLVSA
QDRDLPAMGQRFYFKSLKDVRNRNFTIRDFGNNTAGIVTRRAGFRRQQQRWYAVGVVVED
GGFPVRSSTATLSVQVCSCAGGGGGGGGGAGSGALVACSAEAVFLPVGLSTGALVAILLC
VVILLVIVVLYVGLRRHKDKEALMSSKEDIRDNVIHYDDEGGGEEDTHAFDMGTLRNPKA
VKELALRRDVRPDGHSLTDLAHAAAAAAEDSEDIRSYIHQRLLENHANGTAPPYDSLATY
AYEGEGSVAESLSSIESWSADPEEEFKCISDWGPRFKTLAGLFGDQDAQAARVSNNKDSH
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaccaccggaacctgaggagacacgggttctccggagcgcaacgggtc
aagagaggatgggtgtggaaccagttttttgttctagaagaatatatgggttcggaacct
cagtatgttggcaagctccacacagacatggacagaggggacagcctggtgaagtacacc
ctgtctggagagggagtgggctccatcttcaccatcgagcccaccaccggagacatccac
gccttaaggagcctggaccgggaggagaagccttactacacgctgcgggcccaggcggtg
gacatgcgcaccggccggccgctggagcccgagtccgagttcgtcatcaaggtgcaggac
atcaacgacaacgagcccaagttcctgggcggaccctacgcggccaccgtcccggagatg
tcccccgtaggcacctatgtgacacaagtgacagcgagcgatgccgatgaccccacctat
ggacacagtgccaggattgtgtacagcatcatccatgggcaaccatacttctcagtggat
tcaaaaacagggattataaagacagctttgccaaacatggaccgagaggtaaaggaagtc
taccaggtcctcatccaagccaaggacatgggaggccagctcgggggcctggcagggacc
actaccatcaacatcaccctcagtgacgtcaacgacaacccccccagatttacaaagagt
atctttcatctgcgcgtccccgagtcctcccccatcgggtcagccgtgggcaagattgtc
gctcatgacctcgacgacggcaagaacgcccgagtggagtacagcatcgttccaggggac
gggggcaccatgttcgacattgtcaccaacgagctcaaccaggaaggcacagtgatcctc
aaaaagcggctggactatgagactagaaaggcgtacacgttcaaagtggaagcgtcgaac
gtgcacttggaccctcgcttcctgcaccaggggccctttaaggacacggcgacggtgaag
gtgaacgtgctggacgtggacgagccgccggtgttcagcaagccccactacagcatggag
gcctacgaggacacacctgtgggcatcatcgtgggcgcagtgagagcacaggacatggac
gtgggcaacagtccaattaggtactctattgactggaagagggatttggagcatgcattt
gacattgacccagtggagggacttatcacagtcagtgagttcctggaccgggagactgtg
gcacgacacaacatcacagttgttgcaactaaagttaacaatccacttctgtttagcaag
gttggtgtcacaattaccgtgttggatgtcaacgagtttgctccggagcttgtcatccca
cctgagacaattgtttgtgaaagtgccaaagtaggacaggtgatccagctggtcagtgca
caggacagagatctgcctgcgatgggtcagaggttctacttcaagtcactcaaagacgtc
cggaacaggaacttcaccatacgggactttggaaacaacacggcgggcatcgtgacccgg
cgcgcgggcttccggcggcagcagcagcgctggtacgcggtgggcgtggtggtggaggac
ggcggcttcccggtgcggagcagcacggccacgctctcggtgcaggtgtgctcgtgcgcg
ggcggcggcggaggaggcggcggcggtgccgggtccggcgcgctggtggcgtgcagcgcc
gaggccgtcttcctgcccgtgggcctgagcaccggggccctggtggccatcctgctgtgc
gtggtcatcctgctggtgatcgtggtgctctacgtgggcttgagacgacacaaggacaag
gaggctctcatgtcctccaaggaggacatccgggacaacgtcatccactacgacgacgag
ggcggcggcgaagaggacacgcacgccttcgacatgggcacgctccgcaaccccaaggcc
gtgaaggagctggcgctgaggcgggacgtccggccggatggacactcgctgacggacctg
gcccacgcggcggcggcggcggccgaggacagcgaggacatccgctcgtacatccaccag
cggctgctggagaaccacgccaacggcacggcgccgccgtacgactcgctggccacgtac
gcgtacgagggcgagggctcggtggccgagtcgctcagctccatcgagtcgtggagcgcc
gaccccgaggaggagttcaagtgcatcagcgactggggcccgcgcttcaaaacactggcg
ggcctcttcggggatcaggacgcgcaggccgcgcgggtcagcaacaacaaagattcccac
tga
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