Sardina pilchardus (sardine): 134099816
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Entry
134099816 CDS
T10667
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134099816 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134099816 (slit2)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134099816 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
LRRNT
Laminin_G_2
Laminin_G_1
LRRCT
LRR_9
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
LRR_EndoS
EGF_3
EGF_Teneurin
Laminin_G_3
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
134099816
NCBI-ProteinID:
XP_062408819
LinkDB
All DBs
Position
2:43369590..43493376
Genome browser
AA seq
1469 aa
AA seq
DB search
MVVFRQAAALSLLVAFFGAVESQPCPAPCSCSGTTVDCHGQGLRSVPRNIPRNTERLDLN
ANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNNLQVFPELLF
LGTLKLYRLDLSENQIQGIPRKAFRGAVEIKNLRLHSNNLMCDCHVAWLSEWLRQRPRLG
LYTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSASCSVLQCPDSCTCSNNIVDCRGKGLTD
IPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQISDMAADSFQGLRSLNSL
VLYGNKVTELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK
GTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQENPIETSGARCTSPRRLANKRIGQIKS
KKFRCSGAEDYRSKLGGDCFADLACPDKCRCEGTTVDCSGQKLTKIPDHIPQYTTELRLN
NNEFTVLEATGIFKKLPHLRKINLSNNKITDMEEGTFEGATGVNELILTTNRLENVHFRM
LKGLSGLRTLMLRSNRISCVSNGSFTGLSSVRLLSLYDNQITSMSPGAFDTLHSLSTLNL
LANPFSCNCHLAWLGEWLRKKRIVTGNPRCQTPYFLKEIPIQDVAIQDFACEDGNDENSC
SPLMRCPAECTCLDTVVRCSNKGLKILPKGIPKEVTELYLDGNQFTQVPLELSNYKQLTL
IDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLRSLRLLSLHGNDIAVIP
EGAFKDLASLSHLALGANPLHCDCNMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLLTTP
SKKFTCNGPVDVSILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDTPIHAC
ITSPCQNAGTCNLKEGEENSFWCACPEGFEGEKCEINIDDCEDNDCENNSTCVDGINNYT
CLCPAEYTGELCEEKLDFCAPELNSCQHDSKCILTPQGFKCECTPGYVGEQCEVDFDDCQ
DNKCKNGAQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHDCANGAQCVVMGT
DPVCQCLQGYEGVRCERLVSVNFVDRESFLQIPSNIVTEQANISLQIATDEDNGVLLYKG
DGEHIAVELFRGRLRVSYDTGSYPPSAIYSVETINDGSFHVVELVAQEQTLSLSIDGGSP
KTISTLSRQSATQQPNPSPLYLGGLPGQVGLAALRQGPGRNGSSFHGCIRNLYINGELQD
LTQFLLQSGVLPGCQPCSRPQCTHGTCHPTGQSSFSCECEPGWTGQLCDQQVNNPCDGNK
CIHGTCLPINSYSYSCRCQPGFAGVLCDEEEVYSPCQALNCKYGTCLVSGLGKPYCECSA
GYSGESCDREVACRGERVRDHYQRQQGYAACQTTEKVSRLECRGSCVGGQCCGPLRSKRR
KYSFECTDGSSFVQEVEKVVKCGCTMCPT
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtatttaggcaggccgcggctctgagtttgttggtggcttttttcggcgcggtg
gagtcgcagccatgcccggctccgtgctcgtgttcggggaccacggtggactgccatggt
caggggctgcgcagcgttccgcggaacatcccccgcaacacagaacgactggatttgaat
gcaaacaacctgacaaaaatcactaaagcagattttgctggattgaggcatctcagagtt
ttgcagctgatggagaacaagatcaccactatagagagaggagccttccaagacctcaag
gagctggaacgactacgtctgaaccggaataacctccaagttttccctgagctgctgttt
ctggggactctgaagctctacagactagatctcagtgagaaccagatccaaggcatcccc
aggaaagcattcagaggagccgtcgagattaagaaccttcgcctccactccaataacctg
atgtgtgactgccatgtggcgtggctgtcggagtggctgagacagcgcccccgtctgggc
ctgtacactcagtgcatggctccgcctcacctccgcggacacaacgtggctgaggtgcag
aagaaagagttcgtctgcaccgggcaccagtcgtctgcgtcctgtagtgtgttgcagtgt
cccgactcctgcacctgcagcaataacatagtggactgcagagggaaggggctgaccgac
atccccaccaacctgccagagaccatcacagaaatccgcttggagcagaattctatcaag
attattccagcaggagccttcgcaccatacaagaggctaaggagaatagatctgagtaat
aaccagatatctgacatggctgccgactccttccaaggtcttcgctccctcaactcattg
gtcctctacggcaacaaggtcacggagctgcccaaaggactgttcgagggcctgttctct
ctacagttactacttctgaacgccaacaagatcaactgcttgcgcgtggacgccttccag
gacctccacaacctcaacctcctctcgctctacgacaacaagctgcagaccatcgccaag
ggaaccttctcctcgctgcgggccatccagacactgcacctggctcagaacccgttcatc
tgtgactgccatctgaagtggctggcggactacctgcaggagaaccccatagagaccagt
ggagcgcgctgcaccagcccccgccgcctggccaacaagcgcatcggccagatcaagagc
aagaagttccgctgctcaggtgcggaggactaccgctccaagctggggggggactgcttc
gctgacctggcctgcccagacaagtgccgctgtgagggcaccaccgtcgactgctccggc
cagaagctcaccaagatccctgaccatatacctcaatacaccactgagctgcgcttgaac
aacaatgagttcacagtcctggaggccacgggaatcttcaagaagcttcctcacctccgc
aaaattaacctcagtaacaataagatcacagacatggaggagggcacgttcgaaggagcc
accggcgtcaacgagctcatcctgaccaccaaccgcctggagaacgtccacttccgcatg
ctcaagggcctgagtggcctacggacactgatgctgaggagtaacaggatcagctgtgtg
agcaacggcagcttcacaggactaagctcagtacggctgctctctctctacgacaaccag
atcacctccatgtcaccgggcgccttcgacaccctgcactcgctctccacactgaacctg
ctggccaatcccttcagctgcaactgtcacctggcctggctgggggagtggttgcgcaag
aagcgcatcgtcaccggcaaccctcgctgtcagacgccctacttcctgaaagagatcccc
atccaggacgtggccatccaggactttgcctgcgaggacggtaatgatgagaatagctgc
tctccgctgatgcgttgccctgctgagtgtacgtgtctggacactgtggtgcgctgcagc
aacaaaggcctcaagatactgcccaagggcattcccaaagaagtgaccgagctgtatctg
gatggaaaccagttcactcaggtccctctggagctctccaactacaagcagctcactctc
attgatttaagtaacaaccagatcagcacgctgtccaaccacagcttcagtaacatgtcc
gagctgcttactctaatcctaagttacaacaggctgaggtgtattccagcaaaagcattt
gatggcctcagatcactccgtctcctgtcactccatggaaatgatattgctgttatccca
gagggagcctttaaggacctggcttcactgtcccacctggctctgggggcgaacccgctg
cactgcgactgcaacatgcagtggctgtcggactgggtgaagtcgggctataaggagcct
ggcatcgcacgctgcgccggcccgggagacatgacggacaagctgctgctcaccacgccc
tccaagaagttcacctgcaatggcccagtggacgtgagcatcctggccaagtgcaacccc
tgcctgtccaacccctgcaagaacgacggcacctgcaacaacgaccccgtggacttctac
agatgcacctgcccctacggcttcaagggtcaagactgtgacacacccattcacgcctgc
atcaccagcccctgccagaacgctggcacctgcaacctgaaggaaggagaggagaacagc
ttctggtgtgcgtgcccagagggctttgagggagagaagtgtgagattaacattgacgac
tgtgaagacaatgactgtgagaataactccacctgtgttgacggcatcaacaactacacc
tgcctctgtccagcagagtacacaggtgaactctgtgaggagaagctggatttctgtgcc
cctgagttgaactcgtgccagcatgactccaaatgcatcctgactcctcagggattcaag
tgtgagtgcactcctggctacgttggagagcagtgtgaagtggatttcgatgactgccag
gataacaagtgtaaaaatggagctcagtgcatcgatgctgtcaatggctacacctgtgtg
tgtccagagggttacagcggtctgttctgtgagttctccccgccgatggtcctgcccaga
accagcccgtgtgataaccacgactgcgccaacggggcacagtgtgttgtcatgggcaca
gaccccgtgtgccagtgtctccagggttacgagggcgtgcgctgtgagaggctggtcagc
gtcaactttgtggacagagagtccttcctgcagatcccctccaacatcgtcacggaacag
gctaacatctctctgcagattgcgactgacgaggataacggcgtgctgctgtataagggc
gacggagagcacatcgctgtggagctgttccgtgggagactgcgcgtgagctatgacacg
ggctcctaccccccctctgccatctacagtgtggagacgataaacgacggtagtttccat
gtggtagagctggtggctcaggagcagaccctgtctctgtccatcgacggcggcagcccc
aagaccatcagcaccctcagcagacagagcgctacccagcagcccaacccgtcgcctctc
tacctgggcggtctcccaggtcaggtgggcttggcagcgttgcgtcagggtccggggcgt
aacggctccagtttccacggctgcatccgtaacctgtacatcaacggggagctgcaggac
ctgacgcagttcctgctgcagtcgggcgtgttgccggggtgccagccctgcagccgcccc
cagtgcacccacggcacctgccaccccacgggccagtcctccttcagctgcgagtgtgag
ccgggctggaccggacagctctgcgaccagcaggtcaacaacccctgcgacggcaacaag
tgtatccacggcacctgtttgcccatcaactcgtactcctacagctgccgctgccagccg
ggcttcgcgggcgtgctgtgcgacgaggaggaggtgtacagcccgtgccaggcgctcaac
tgcaagtatggcacgtgcctggtgtctgggctgggcaaaccctactgcgagtgcagcgcg
ggctactctggagagagctgtgaccgagaagtggcatgtcgaggcgaacgggtccgagat
cactaccagaggcagcagggctatgcggcgtgccagaccacggagaaggtctcccggcta
gagtgccggggcagctgtgtgggggggcagtgctgcgggccgctgcgcagcaagaggcgg
aaatactccttcgagtgcacagacggctcctccttcgtgcaggaggtggagaaagtggtc
aagtgtggttgtacgatgtgtccaacctag
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