Sardina pilchardus (sardine): 134099894
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Entry
134099894 CDS
T10667
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134099894
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
134099894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-H2C2_5
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
134099894
NCBI-ProteinID:
XP_062408909
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All DBs
Position
2:45261307..45282842
Genome browser
AA seq
1322 aa
AA seq
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MAEGPRCKRRKQANPRRNGVSNLSNAETGSDSDDEDRLHIVEDDALPSMPHSPGDAEGTN
GTAHGLLTVKQECCSEEEDDDGEREELIQRGDTPSNDENGTPDSFSQLLTCPYCSRGYKR
HASLKEHVKLRHEKNDDNYSCSQCSYTFSQRAQLQRHMGAHKHGRDQRVLSQSGGSRKFK
CSECSKAFKYKHHLKEHLRIHSGEKPYECTNCKKRFSHSGSYSSHISSKKCVPPPVTPAN
GLQRPIGAAKPTQTTPPTNKPPPPTRLLLREKIEAGPTQEQRPIKQLKTEPAEVESKPVV
MVAAQPPPPPPSQQGLVQALVLPTMGLVQPISINLSDLQSALKLAVDRGGAVVRQVLASG
AHANANGAKVIGQAAGGPRTQTLLVQNPQNPQLLSAIQLPLLEQDGTTKIIINYGTATAS
MASPPAHTATTHTSTTHTGTAQAGTGQTAPVAPGPGQTLGQTAPVQTSTAQTGPVQTGAG
ATVPAKWSPTPVSASVPSAAQSGAAKPGSVTVVPLTGPQPQLSRAQTVPLQIRPTQSGLV
QLSLVQSSAGQGPVGRPALAQFGPALTSGPAKLLLAQTTGTRTTATRLVRIIPAPLAAPH
GPLRNATAKPTEPEPEPEPVPQGEDSTADPQNNNSTELQNPALVRVKVEPGEPEGEPEGE
PEGEPEGNGPVDAQKQAEEEEEEEEEEEEEGASAQCPLCDDGFPDPLRELQSCLRDDGPE
AAGSAGSSGSGVVSLRSLLALLKVYGAASSPGEEQLRAAAKEARLPLPVVQRWFSRMRST
GQDTHTHAHTHTHTHTRSRSRTRSADTLATHTTHKHAHAHTTHTEATRAAHTANTPTTNT
HTANTHTANTPTTLSSTPTADPKQAISLASPSQDPPVCSEPQDCGPTLSSSPGLSATCAP
LPSSPPSPPSPPSSPAAPPSPLDLSAAGLLIVKTEVDSEGESQAEPLDLSLPRTALPRAN
ASASTNANANASVQQEPLNLSCIKKEEEPATVLCPSNHHHNNNNNNKNSVTTIAVATTAA
APVATATTTTIYLSPQTVTPLNIALATRLVAIAEPGAVPCLPTGVVTATANQKRTILIPQ
LTYTYTPSNTHNTVILNGEQEDRADSASGVSVGEEPNDTDSAPSPKKKRLQAGQYACDLC
DKIFQKSSSLLRHKYEHTGKRPHECAVCRKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRF
SHSGSYSQHMNHRYSYCHRDAAALPLTHTHTHTHTLTEPRGSEEEDEEEEEEEGEAISLD
DIRVVRVCLNFDLFCPVASSSSSRISVLAAADPWWWNPSVAPSLSSHLSSASLCSECGQI
LV
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggacccaggtgcaaacggcgaaagcaggcgaacccgcggcgaaacggtgtg
agtaacttgagtaatgcagagaccggctcagactcagatgacgaggatcggctccatatt
gtggaggatgacgcccttcccagcatgcctcactctcctggggatgcagaggggaccaat
ggcaccgcccacggcctgctcactgtgaaacaggagtgctgctctgaagaagaagatgat
gatggagagagggaggagctaatccaaagaggagacacacccagcaatgacgagaatgga
actccagactcattctctcagctgctcacatgcccgtactgttcccgtggttacaagcgc
cacgcctcactgaaggagcacgtgaaactccgtcacgagaagaacgacgacaactacagc
tgctcccagtgctcatacaccttcagccagagagcacagctccaacgtcatatgggcgct
cacaaacacggcagagaccagcgtgtgttaagccagtcaggcggaagcaggaagtttaag
tgttccgagtgttccaaggcctttaagtacaagcatcacctcaaggagcacctacgcatc
cacagtggagagaagccctatgagtgcactaactgtaagaagcgcttctcccactccggc
tcttactcctcccacatcagcagcaagaaatgcgtcccgccccccgtaacccccgccaac
ggcctccagcggccaataggagctgccaaacccacccagaccacaccccccaccaataag
ccgccgcccccaacccgactgcttctcagggagaaaatagaggcgggacctacgcaggag
cagcggccaatcaaacagctcaaaacggagccggccgaggtggagagcaagcccgttgtc
atggtggcagcccagccccctcccccgcccccttctcaacagggattggtccaggctttg
gtcctgcccaccatgggactggtccagccaatcagcatcaacctgagtgacctgcagagc
gcgctgaagctggcggtggaccgggggggcgcggtggtgcggcaggtgctcgcgagcggc
gcccacgctaacgctaacggcgctaaggtcataggtcaggcggcgggggggccgcgcacg
cagacgctgctcgtgcagaacccccagaatcctcagctgctgtcggccatccagctgccc
ctgctggagcaggacggcaccaccaagatcatcatcaactacggcaccgccaccgccagc
atggcatccccccccgcacacacggccaccacacacacgagcaccacacacacgggcacc
gcccaagctgggacgggtcagactgcgcctgtagctccaggcccgggtcagactttaggt
cagactgctccagttcaaactagcacggctcaaacaggtccagttcagacgggcgcaggt
gcgactgtgccagctaaatggagcccaactccggtcagtgccagcgtgcccagtgctgcc
cagtctggcgccgctaagcccggctcggtgacggtggtgcccctgaccgggccccagcct
cagctcagccgggcccagacggtgccgctccagatccggcccactcagtcgggcctggtg
cagctcagcctggtccagtccagcgcaggacagggcccggtgggccgacccgccttggcc
cagttcggccctgcgctcaccagcggtccagcgaagctgctcttggcccagacgaccggc
accagaaccaccgccaccaggctggtgcggatcattccggctccgcttgcagctccgcac
ggacccctccggaacgccaccgccaagcccacagaaccagaaccagaaccagaaccagta
ccgcagggggaggacagcaccgcggacccgcagaacaacaactccacagaactgcagaac
cctgcgctggtgcgggtcaaagtggaaccgggggaaccagagggggaaccagagggggaa
ccagagggggaaccagagggcaatgggcctgtggacgcacagaagcaagcggaggaggag
gaggaggaggaggaggaggaggaagaggagggggcgtcggcacagtgccctctgtgcgat
gacggcttccccgacccgctgcgtgagctccagagctgtctccgtgacgacgggcccgag
gcggcggggtcggcggggtcgtcggggtcaggggtcgtgtcgctgcggagcctgctggcg
ctgctgaaggtgtacggcgcggcgagcagccccggcgaggagcagctgcgtgcggccgct
aaggaggcgcgtctccccctccccgtggtgcagcgctggttctcccgcatgaggagcacg
ggccaggacacacacacgcacgcgcacacacacacacacacgcacacgcgctcgcgctca
cgcacgcgcagcgcagacacgctcgcaacacacaccacacacaaacatgctcacgcacac
accacacacaccgaggccacacgtgcggcacacacagcaaacacgcccactactaacaca
cacactgcaaacacgcacactgcaaacacccccactacgctctccagcacccccacagca
gacccaaagcaggcgatctccctggccagccccagccaggacccccctgtgtgctcggag
ccccaggactgcggtccgactctgagctccagccccggcctgagcgccacgtgcgccccc
ctgccctcctcgcccccctcgcccccctcgccaccctcctcgcccgccgcacccccctct
ccgctggacctctcggccgccgggctgctcatcgtgaagacggaggtggactcggagggc
gagagccaggcggagccgctggacctgtccctgccgcgcaccgcgctcccccgcgctaac
gctagtgctagcaccaacgctaacgctaacgctagcgtgcagcaggagccgctcaacctc
agctgcatcaagaaggaggaggagcctgccacagtgctgtgtcccagcaaccaccaccac
aacaacaacaacaacaacaaaaacagtgttacgactatcgctgtggcgacgaccgctgct
gccccggtagccacagcaacgacgaccaccatctacttgagtccacagacggtgacgccg
ctcaacatcgccttggcaacgcggctggtggccattgctgagcccggggccgtcccctgc
ctgccgaccggtgttgtcacggcgacagccaatcagaagcgcaccattctcatccctcag
ctgacgtacacctacacacccagcaacacacacaacaccgtcatccttaacggagaacag
gaagacagagctgactccgcctctggagtgtccgtaggggaggagccaaatgacacagac
tccgccccttcccccaagaagaagcgtctgcaggctgggcagtacgcttgtgacctgtgc
gacaagatctttcagaagagcagctcactcctgaggcacaaatatgaacacacaggtaag
cgtcctcacgagtgtgcggtgtgcaggaaggcgttcaaacacaagcaccacctgatcgag
cactcgcggctgcactccggggagaagccgtaccagtgcgacaagtgtggcaagcgcttc
tcccactccggctcctactcccagcacatgaaccaccgctactcctactgccaccgcgac
gccgccgccctgcccctcacacacacacacacacacacacacacactcacagagccccgc
ggcagcgaggaggaggacgaggaggaggaggaggaggaaggagaggccatcagcctggac
gacatcagagtggtgcgcgtgtgcctgaactttgaccttttctgccctgtcgccagcagc
agcagcagccgcatcagtgttctcgctgctgctgacccctggtggtggaaccctagtgtt
gcgccgtctctgagttcccacctcagctccgcctcgctctgctccgagtgcggacaaata
ttagtgtga
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