Sardina pilchardus (sardine): 134100041
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Entry
134100041 CDS
T10667
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134100041 (paf1)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
134100041 (paf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
134100041
NCBI-ProteinID:
XP_062409073
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All DBs
Position
13:12291301..12298024
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AA seq
540 aa
AA seq
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MAPTIQTQAQREDGHRTSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNILLDPADEKLLEEDIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAIE
KTFEDAQKAIPQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDQSAPAGVDM
MSQAMIRGMMDEEGNQFVAYFLPNEETMRKRKRDVEEDIDFMPEELYEYKIAREYNWNVK
NKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAMLVCNHRDMNEKE
LEAQEARKAQLENHEPEDEEDIDIDKDIPESGDENENEKEKGSESENSDSESEHEEEERH
EREEDEEEEESAKRPRRASGSGSESGDERQARETRADEEEIFGSDDDSDDDGDGDDKAGS
GDGGGGRSSGSEDDEEDDGGRRRSRSRSASPPHSSSDHSEAGQQSGSERGSDSSGDSDSD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctccaacaatccaaactcaagctcaacgtgaagacggacacaggacctcttcacac
agaaccgtcccagagaggtctggcgttgtgtgtcgggtgaagtactgcaacagtctccct
gacatacccttcgacccgaagttcatcacctacccgtttgatcagcacagatttgtacag
tacaaggctacttcactagagaaacaacacaagcatgacctgttgacggaaccagatctt
ggggtcacgattgacctcatcaacccagacacctatcgtatagatcctaacattctcctc
gacccagcagatgagaaactactagaagaggacatccaggctcctacaagttcgaagaga
tctcagcagcatgccaaggtggtgccctggatgagaaagactgagtacatctccacagag
ttcaatagatatggcgtttccaatgagaaagtggaagtcaagattggtgtttcagtcaag
cagcagttcacagaggaagaaatttacaaagacagagacagtcagattgcagccattgaa
aagacatttgaagatgcacagaaagctatcccacaacactacagcaaacccagagtcact
ccagtggaggttctacctgtcttccctgactttaagatgtggatcaacccatgtgctcaa
gtcatctttgactctgaccctgctcccaaagaccagtctgcccctgctggtgtggatatg
atgtctcaggctatgatcaggggtatgatggatgaggaaggaaaccagtttgtggcgtac
ttcctgcccaacgaggaaaccatgcgcaagcgcaagagagacgtcgaggaggacattgac
ttcatgccagaggaattgtatgaatacaagattgccagggagtacaactggaatgtcaag
aacaaggccagcaagggctatgaggagaattacttcttcatcttcagagatggagatggt
gtctactacaacgaactggaaaccagagtgcgtctgagcaagagaagagccaaggctgga
gcgcagtccaccaccaacgccatgttggtgtgcaaccacagagacatgaacgagaaggag
ctggaggcccaggaagcccgcaaagctcagctggagaaccacgagcccgaggatgaggag
gacattgacatcgacaaggacatcccggagtctggcgacgagaatgagaacgagaaggag
aagggcagcgagagcgagaactctgacagcgagtcagagcacgaggaagaggagcgccac
gagcgcgaggaggacgaggaggaagaggagagcgccaagcggcctcggcgggcgagcggc
agcggcagcgagagcggcgacgagcggcaggcgcgggagacgcgcgccgacgaggaggag
atcttcggtagcgacgacgacagtgatgacgacggcgacggcgacgacaaggcgggcagc
ggtgacggcggaggaggccgcagcagcggcagcgaggatgacgaggaggacgatggcggg
aggaggaggagccggagccggagtgcctcgccgccgcacagcagcagtgaccactcggag
gccggccagcagagtggcagcgaacggggctccgactcgagtggcgacagcgacagcgac
tga
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