Sardina pilchardus (sardine): 134100562
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Entry
134100562 CDS
T10667
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134100562 (sbno1)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134100562 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134100562
NCBI-ProteinID:
XP_062409797
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All DBs
Position
14:complement(11321259..11341129)
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AA seq
1411 aa
AA seq
DB search
MSQMMDPGQDLLLAALSESGICPNDLFDLDPQDTAPPPVPQQSVSVSALDGVSLAAEAAG
IMRLEPGQSPTPVPTTTTTIIRQKPQPSTTTFVLNQLNQLPSLGTIVVTKPASGSSGRQT
ITVTKVVHARGMSPAAVMASSSPVCSVVPPGREQVKLKDLLRPGALKTSSLGELMKLKPP
ADIAPPVATATAAKIIVVSSKMMSRAAELNNGVKKEVTSKDVARIWVNEDLKMRSFSPTN
IPHIKEEEEPEEEEEEEMGHAETYAEYMPMKLKTGLRHPDPVVETSSLSSVNPPDVWYRM
AVPEEIIDRGWLSALQLEAITYASQQHETFLPNQDRAAYLIGDGAGVGKGRTIAGIIYEN
YLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIF
ATYSSLIGESQSGGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLA
VLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFTNFIQAVERRGVGAM
EIVAMDMKLRGMYIARQLSFQGVTFKIEEVPLSNDYIKMYNKAVRLWVSAREKFQAAANL
MDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEAR
TLEALEEGGGELNDFVSTAKGVFQSLVEKHFPAPDRQKLFSLLGIDLPSKKPVAAANNNA
QDQKGTKRKGQEIKKETKRKRRTGGLSGSSSEESQSDESDQDAESDDSFKSVSSGEEEDD
FNPFRDESSEDDEGDPWLIRKDSKKGKEKKGKKKKKSIDPDSIQSALLASGLGSTRPAFT
TPVAKVPTAVTPAAKADSDGCMTSQDAVEDAQQMKRHLLEELEKLSEQLPPNTLDELIDE
LGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISE
AASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELA
GEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPL
VSPPSEFEGDFFKEIRNGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMAVQQQNA
LFQYFAETLTAVIQNAKKNGRYDMGILDLGSGDEKVKKADTRKFLTPGYSTSGHVELYTV
SVERGMSWEDATHIWAEHNGADDGFYVQVRNNKKTALLVTEVNTKKRLFLVYRPNTGKQL
KQESYADIRKKCKKVLSDDAKQHWIDQYNSSAEICAHAFWRGNCKKASAGLQCEIGLRCR
TYFVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLLIPANCVSPLTNLL
SSSDQSQQLAVQQQQMWQQLHPQSLSHSANT
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatgatggatcctggacaggatttgcttttggcggccctgagcgaaagtgga
atctgcccaaatgacctttttgacctcgacccacaggacactgctccacctcctgtgcct
caacagtcggtatcagtcagtgcactggatggagttagtctggcagctgaagccgctgga
atcatgcggctggagcctggtcaatctcccacccctgtgcccaccaccaccacaacaatc
atcagacagaagccacagccgtcgaccacgacgttcgttttgaaccagctcaaccagctg
ccctcgctcggcaccatcgtggtcaccaagcctgcctcgggctccagcggccggcagacc
atcacggtgacgaaggtggtgcacgcgcgcggcatgagccccgccgccgtgatggcgtcc
tcgtcgcccgtgtgctcggtggtgccgcccggccgcgagcaggtgaagctgaaggacctg
ctgaggcccggagccctgaagaccagcagcctgggggagctcatgaagctcaagcccccg
gccgacatcgccccgcccgtggccacagccacagctgccaaaataattgtggtctcttcc
aagatgatgagtagagcagcggagttgaacaatggcgtgaagaaggaggtgacaagcaaa
gacgtggccagaatctgggtgaacgaagacctgaagatgcgaagtttttcccccactaac
ataccacacattaaagaggaagaggaaccagaggaagaggaagaagaggagatgggccac
gcggagacgtacgcggagtacatgccaatgaaactaaagacgggcctgcggcaccctgac
ccggtggtggagaccagctcgctgtccagcgtgaacccgccagacgtgtggtaccgcatg
gccgtccccgaggagatcatcgaccgcggctggctttctgccctgcagctagaggcaatc
acctacgccagccagcaacacgagacattccttcccaaccaagaccgagcggcctatctg
attggggacggcgctggagtgggcaaaggccgaaccatcgctggaatcatttacgagaac
tacctactggggaggaaacgatccctctggttcagtgtctccaacgacctcaagtatgat
gccgagagagatctgcgggacatcggtgccaagaacattcaagtccactcactgaacaag
tttaaatacgggaagatctcctcgaagcacaacggtagcgttaagaaaggagtgatcttt
gccacctactcgtccctcatcggagagagccagtcgggagggaagtacaagacccgattt
aagcagctactgcactggtgtggggatgactttgacggagttattgtatttgatgagtgt
cacaaagccaaaaatgtttgtccgattgggtcttcaaaacccacaaagaccggtttggct
gtgctggagctacagaacaaattgcccaaagcccgggtggtctatgccagcgccacaggt
gcatcggagccacggaacatggcctacatgaaccgccttgggatttggggtgaaggaacg
cccttcagggagttcaccaacttcattcaggcggtggagagacggggtgtgggagccatg
gagattgttgccatggatatgaagttgagagggatgtacattgcacggcagctgagcttt
cagggtgtgacgtttaaaatcgaagaagtccccttatctaacgactacatcaagatgtac
aacaaggcagtacggctgtgggtaagcgcccgagagaagttccaggcggcggccaacctg
atggacgcggagcagcgcatgaagaagtccatgtggggccagttctggtcagcgcaccaa
cgcttcttcaaatacctgtgcatcgcctccaaggtgcgccgagtcgtgcagctcgcccga
gaggaggtcaagaacggaaagtgtgttgtgatcggtctccagtcgacaggagaggccagg
acgctggaggccctggaggaaggaggtggagagctcaacgactttgtgtccaccgctaag
ggtgtgtttcagtctctggtggagaagcactttcctgcccctgacagacagaagctcttc
agcctgctgggtatcgatctgccctccaagaaacccgtcgccgcagcaaacaacaacgcc
caggaccagaagggcaccaagagaaaaggtcaggagatcaagaaggagaccaagaggaag
cggcggacaggagggctgtctggaagcagctccgaagagagccaatcggacgagtcggac
caggacgccgagagtgacgacagcttcaagtcggtcagctccggcgaggaggaagacgac
ttcaaccccttcagggacgagtccagcgaggatgacgagggtgatccctggctcattcgg
aaagactccaagaaaggcaaagagaagaaggggaagaagaagaagaagagcatcgacccg
gactccattcagagtgccttgctggcgtctggtctgggctccaccaggcccgccttcacc
acgcccgtcgccaaagtgcccaccgccgtcaccccagcagctaaggcggatagtgatggc
tgcatgaccagccaggacgcggtggaggacgcccagcagatgaagcgccacctgctggag
gagctggagaagctctcggagcagctgccccccaacacgctggacgagctcatcgacgag
ctcgggggccctgagaatgtggctgagatgacgggacgcaaaggccgggttgtcagtaat
gatgacggcagcatatcctacgagtcccgctcggagctggatgttcccgtagagatcctc
aacctgacagagaaacaacgcttcatggatggagagaagaacattgccataatctcggag
gcggccagctcgggtatctccctgcaggcggaccgcagggtgaagaaccagcgcaggagg
gtgcacatgaccctggagctgccctggagtgcagaccgagccatccagcagttcggccgg
acacacagatccaatcaggtcacagcaccggagtacgtgttcctcatctctgagctggca
ggagaacagagattcgcctcgattgttgccaaaagactggaaagcttgggggctctgacg
cacggcgaccgaagagcaacagagacgcgagacttgagtcgcttcaactttgacaacaaa
tatggaagaaatgcgctggaaatagtcatgaagtccattgtcaatctggactctcccctg
gtttcccctccctcggaatttgaaggggatttctttaaagaaatccgcaatggcttaata
ggcgttggcctgatcaatgtcgaggaccggtcgggaatccttacgttggacaaagattat
aacaacattgggaagttccttaatcggatccttgggatggcagtccaacagcagaatgcc
ctcttccagtactttgctgaaacactaacagccgtcatccagaatgccaagaagaatgga
cgttatgacatgggaattctggatttgggctcaggggatgagaaggtgaagaaagcggac
acgaggaagttcttgacccctggatattcaacctcaggtcatgtggagttgtacactgtg
agcgtagagagggggatgtcatgggaagatgccacccatatatgggcagaacacaatggt
gctgatgatggcttctatgtgcaggtgaggaacaataagaaaactgcccttttggtcacg
gaggtcaataccaagaagaggctgtttctggtttacagaccaaatacagggaaacaattg
aaacaagagagttatgctgacatccggaaaaagtgtaaaaaggtcctgtccgatgatgcc
aagcaacactggatagatcagtacaactcctccgcagaaatctgtgctcatgctttctgg
cgtgggaactgcaagaaggcgtcggcggggctgcagtgcgagatcgggctgcgctgcagg
acctacttcgtcctgtgcggctcggtgctcagcgtctggaccaaagtagagggcgtgttg
gcctccgtcagcggaaccaacgttaaaatgcagatcgttcgtttgagaacggaagacggg
cagagaatagtgggtttgttgatcccagccaactgtgtgtcccctttgaccaacctcctg
tcgtcgtcggaccagtcgcagcaactggccgtccagcagcagcagatgtggcagcagctg
cacccgcagagcctcagccactcggccaacacatag
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