Sardina pilchardus (sardine): 134100608
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Entry
134100608 CDS
T10667
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134100608 (rc3h2)
04121 Ubiquitin system [BR:
spil04121
]
134100608 (rc3h2)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
134100608 (rc3h2)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134100608 (rc3h2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf_CCCH_4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
134100608
NCBI-ProteinID:
XP_062409884
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All DBs
Position
14:13091371..13119934
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AA seq
1115 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDGSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDLLPVNRALLQLVGAQVPDSPNVSLGSAVDSEHYEVCRACVEELALYLKPISGGKGVAT
LSPSALSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLELLANI
DHNADAAPPTWEELESVMLAVKVVVHGLVEFIQNFSKKSHETPQPQPNSKYKTSMCRDLR
QQGGCPRGANCTFAHTQDELENPLSCLPRYRMRNKKLNGASRPFLLPQGVLGKAPNCKGG
IPAGEPSMGGLKGPEKDTQAPDGHSPTQLIPRGADALDDLKRTLPNGANTLSQSSSINLE
QKTVSPPKTPVSQTQALLLSPNATAHEMGGGASPKPAHFLLRGHPELYYQDQRSPTCDVP
PYQTASNYYTPSGLPSKPCVARFLRSGNVAESSFPPTSPYADQPSLLATRERLGPSYGQP
PPPPPPQSSPAACGSLSPGHGHAHGHGHAHGVYAPVYDSRRAWRPQLYQREDGRSNSLPP
EVLHSPACQPPPTRERYNSLDSPYCGSTDHRAALHRTHRPAVCSQDSYARAPLGYEDLLH
RKQEQWAHHHNNVSRPSQSSPVFAVDFCAEQHADSVGGACVNCKLRAEESLAHYSPWSCG
SISPFDSEPYASSTYNSCSQHMQDVESGGGKRWLHMFEPYRRLKEEDPIIPFGEGPIISK
WGAISRASRTGYHTTDPVQATASQGSVNTTPVNFRDYSPHIGHGDYRWGPRGSDSSSHSS
FLESDQLGVAELQARRPSLIGGEKLGMELLHAEANPYSAEGEPERDIELELSALDLEDNE
AHQTPIQQEPLEVRVPPQHSHLSPPSTEPQPQKLSPDGMDPHLLKKMAFRKALSPGGLGS
GRLGIGKLMMKTGPPSRSDSPHSSSTGPEVLLNGS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggcccagtggaccgagttcctgtcctgccccatctgctacaatgag
ttcgacggcagcggccacaagcccatcagcctgggctgctcgcacaccgtctgcaaaacg
tgcctgcacaagctgcaccgcaaggcctgccccttcgaccagaccgccatcagcaccgac
atcgacctgctgcccgtcaacagagccctgctgcagctcgtcggcgcacaggtccctgat
agcccgaacgtatccttgggcagtgcagtggacagtgagcactatgaagtgtgcagggcc
tgtgtggaggaactggccctctacctgaaacccatcagtggaggtaaaggcgtggcgacg
ctcagcccgagcgccctcagccggcccatgcagcggaagctggtgacgctggtcaactgc
cagctggtggaggaggaggggcgcgttcgggccgtacgggccggccgctccctgggcgag
cgcaccgtcaccgagctcatcctccagcaccagaaccctcagcagctctccgccaacctg
tgggccgccgtccgcgcccgcgggtgccagttcctcggaccagccatgcaggaggacgct
ctgaagctggttctgctggccttggaggacggctcggctctgtcccggaaggttctggtg
ctctttgtggtccagaagctggaggcgcgcttcccccaggcgtccaagaccagcatcggc
cacgtggtgcagctcctctaccgggcctcctgttttaaggtgaccaagcgggatgaggac
tcgtcgctcatgcagctgaaggaggagttccgcacctacgaggcgcttcgacgcgaacat
gacgcccagatcgtccacatcgccatggaagccgggctccgcatctcccccgagcagtgg
tcctcgctcctctatggagacctggttcacaagtcccacatgcagtccattatcgacaag
ctgcagtcgccggagtcgtttgcgaagagtgtccaggagctgacgatcgtgctgcagagg
acgggggacccggccaacctgaacagcctcagaccacacctggaactcctagccaacatc
gaccacaatgcagatgctgcacctccaacctgggaggagttggagagtgtaatgttggct
gtgaaagtagtagtccatggcctggtagagttcatccagaacttcagcaagaaaagtcac
gaaacgccccagccacagccaaacagcaagtacaagactagcatgtgcagagacctacgg
cagcaggggggctgcccacgaggggccaactgcacttttgcccatactcaggacgaactg
gagaatcctctctcctgtttgcccaggtacagaatgaggaacaagaaactcaatggggcc
tcccgccccttcctgctcccccagggggttctgggcaaagcccccaactgtaaggggggc
atcccggcgggtgagccctccatggggggtctgaagggcccggagaaggacacgcaggcc
cccgacggccactcgcccacgcagctcatcccccgaggtgcagatgcgctggatgacctg
aagaggacgctacccaatggtgccaacacgctctcgcagtcctcctccattaacctagag
caaaagactgtttcacctccaaagacgcccgtcagccagactcaagccttactcctgtct
cccaacgccacagcccatgagatgggtggcggcgcctctcccaagcctgcccacttcctg
ctgaggggacaccccgagctctactaccaggaccagcggtccccgacgtgtgacgtgccc
ccctaccagacagccagtaattactatacgccctccggcctcccctccaaaccctgtgtg
gctcgtttcctgcgctctggcaacgtggccgagtcctccttccccccgacgtcgccgtac
gctgaccagccgtctctgctggccacgcgcgagcgtctcggcccttcctacggccagccg
ccgccgccaccgccaccgcagtcgtcgccggcggcgtgcggctccctgagccccggtcac
gggcacgctcacggccacgggcacgctcacggcgtctacgcgcccgtctacgacagccgg
cgggcctggcggccgcagctgtaccagagggaggacggccggagcaactccctgccgccc
gaggtgctgcactctcccgcctgccagcctccccccaccagggagcgctataactcactg
gacagcccttactgcggctccacggatcacagggccgcactgcacaggactcaccgtccc
gctgtctgctctcaggactcatatgcacgcgctcctctcggctacgaggacctgcttcac
cgtaaacaggaacagtgggcgcatcaccataacaacgtcagccggccctcccagtcctca
cctgtcttcgctgtcgatttttgtgctgagcagcatgctgatagtgtgggtggcgcgtgt
gtgaactgtaagttgcgtgcggaggagagtctggcccactactcgccctggtcgtgtggc
tccatcagccccttcgactctgagccctacgccagctccacgtacaactcctgctcgcaa
cacatgcaggatgtggagagtggcgggggcaagcgctggctgcacatgtttgagccgtac
cgccgactgaaggaggaggaccccatcatcccgttcggggaaggacccatcatctccaag
tggggggccatctcccgcgcctcccggaccggctaccacacaactgacccagtccaagcc
accgcctcacaggggagtgtcaacaccacgcctgtcaacttcagagattacagcccccac
attggacatggagattacagatggggtccgcgggggtctgactcgtccagccactccagc
ttcttagagagtgaccagttgggtgtggcagagctgcaggcacgccgaccctctctgatt
ggtggagagaagctggggatggaactccttcatgcagaagccaatccgtacagtgcagag
ggtgaaccagagcgggacatcgagttggaactgtctgctttggacctggaagacaacgaa
gcgcaccagacccccatacagcaggagccgctggaggtgagggtacccccccagcactct
catctgtccccccccagcactgagcctcagccccagaagctctctcccgatgggatggac
ccccacctgctcaagaagatggccttcaggaaggctttgtctccgggaggccttggctct
gggaggctgggcatagggaagctgatgatgaagacgggcccaccgtctcgctccgatagc
ccccactcctccagcaccgggcctgaggtgctgctgaacggcagctga
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