Sardina pilchardus (sardine): 134100661
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Entry
134100661 CDS
T10667
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134100661 (tnca)
04518 Integrin signaling
134100661 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134100661 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134100661 (tnca)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134100661 (tnca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
DUF7949
Fn3_PBP1
EGF_PEAR1L
EGF
NDNF
FN3_Tor_3rd
hEGF
CBM_4_9
REJ
Actin
Motif
Other DBs
NCBI-GeneID:
134100661
NCBI-ProteinID:
XP_062410001
LinkDB
All DBs
Position
14:26217894..26247204
Genome browser
AA seq
1721 aa
AA seq
DB search
MMGTSRLLLGGFVLAVLLNLNDGGLVKKILRHRRQILAAPAVDNITLPNPRQPVVFNHVY
NIKVPAGSLCSVDLDSPGGTELEPKDDPAGTRMTEHTLDAENQIVFTHRIKIPKQACGCT
DGMPELKSLLSRLEMLEGEVSSLREQCTSDGGCCGAQATGNVGTTPYCSGHGNFSNDICG
CVCDPGWKGPNCSESECPDECSDQGRCVDGKCQCFEGYGGHNCSLEICPVDCGKYGECIR
GVCVCVDGYFGKGCSESDCLNNCLGRGQCVDGDCVCEEPWTGFDCSELICPNDCYDRGRC
LNGTCQCDEGYAGADCGQRTCPNDCTGRGFCVDGQCVCSAGYTGEDCSSLTCLNDCSGRG
QCFNGVCICETGYQGEDCSQLACLNNCHHRGQCINGRCQCDAGFQGEDCSELSCPNDCRG
RGRCVNGQCVCDEGFAGEDCNVRTCPSDCYGRGDCVDGKCVCHAGFTGEDCSELSCPNDC
QDRGRCVSGQCVCDEGFTGEDCSLKACPNDCLGRGRCDDGRCVCQEGFAGDDCSELTCPA
NCNGRGRCVNGACQCEAGYEGDDCGQRSCLNNCHGLGRCIDGQCVCDEGYIGEDCSLVSP
PKDLTVTDVNTESVNLTWFNEMLVTEYLVTYVPTAPGGLQLERTVPGDRTAATIDDLEPG
IEYLIKVHAVLSNQKSVPVSARVATHLPQPDGLKFKSVRDTSVEVLWDQLDIPHDGWELS
FRNTKEENGKILNALNRGQTSFEQFGLGPGQEYEVSLGVVKNNTRGPQTTQTVMTKLDTP
RQLEVRDVADNSAVISWSLPVAQIDTITLSFGPSSNPADRKSVDLAPTQTQHTAEGLSPD
TEYEVTLVSKRGDMSSDPASDTFTTDLDAPIDLQVVGQTDSTVTLGWTNSQADVSKYRVK
FSPLSGTAHGEELFPEGAGDKTEVTITGLKPGTEYGIGVNAVKNERESLPATVTAMTDLD
PPRDLEVTEATETTMTAAWKRPRAKIGNYRLAVESADGRRDELEVPGDATTHTLTGLTPG
VRYTITLVAERGRKRSEPVSTSASTEERKPQVGNLTVSDVSWDSFNVSWTIEVGEFEGFV
LEVANLEGGPERQNLTLSGDALSLFMSGLSPSSTYMIALYGLHKGYLLGPVYTVATTEAE
PEIEHLFVSDITPESFRIAWTAEDGVFDRFVIKVRDAKKLAHPQEFNVAGDERTKVMTDL
MGGTEYEIELYGVTLEHRSQPLTAVARTGLGAPRGISFSDITATSSMVHWTVPRANVDSY
RVTFVPLQGGNPETVTIDGVQSETLLPNLIPGETYQVTVVAVKGLEESEPITDTMTTALD
MPRSLTAVNVTDTEALLLWQPAIATVDGYVITYTADTGSPVTERVSGNIVEFEMNSLSPN
TPYTVSVYATKDALKSQAVTTDFTTELDAPRDLVATNVLTDSAMLTWTPPRGAISGYILT
FMASDGTVREVVLDASETSYSATDLSSSMEYVVRLQAVAGAKRSRHISTTFTTAGVLYSF
PKDCSQALLNGESASGLYTIYVGGNKNQPMEVYCDMATDGGGWVVFLRRQSGKTEFFRNW
RNYTNGFGDMMDEFWLGLSNLHKLTTSGPYELRVDLRDGTESVYAYYDKMVVGEPRGRYK
IQIGSYSGTAGDSMTYHQNRPFSTYDNDNDVAVTNCALSYKGAFWYKNCHRVNLMGRYGD
NSHSKGINWFHWKGHEHSVPFAEMKIRPVNFGNLEGRRKRS
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaccagccgcctactgttaggcggttttgtcttagctgtccttttgaatctc
aatgatggtggtctggtgaagaaaatcctgagacatcggcggcaaattctggcagctcct
gccgtcgacaacatcaccctgccgaaccctcgccagccagtcgtcttcaaccacgtctac
aacatcaaagttccggccggttccctgtgctccgtggatctggactcgcccggcggcacg
gaactcgagccgaaggacgatcccgccgggacgcgcatgacggagcacacgctggacgcg
gagaaccagatcgtcttcacccaccgcatcaagatccccaagcaggcctgcggctgcacc
gacgggatgcccgagctcaagagcctgctgagccgcctggagatgctggagggagaggtg
tcctcgctcagggagcagtgcaccagcgatggaggctgctgtggagcccaggccacaggc
aatgtgggtacaacgccttactgcagcggccatggcaacttcagcaacgacatctgcggt
tgtgtctgtgatcccggctggaagggacccaactgctccgagtcggagtgtcccgacgag
tgctccgaccagggccgctgcgtggacggaaagtgccagtgcttcgagggctacggcggc
cacaactgcagcctggagatctgcccggtggactgcggcaagtacggcgagtgcatccgc
ggcgtctgcgtctgcgtggacggctacttcggcaagggctgctccgagtcggactgcctg
aacaactgcctgggccgcggccagtgcgtggacggcgactgcgtgtgcgaggagccgtgg
acgggcttcgactgctcggagctcatctgccccaacgactgctacgaccgcggccgctgc
ctgaacggcacgtgccagtgcgacgagggctacgcgggcgcggactgcggccagcgcacc
tgccccaacgactgcacgggccgcggcttctgcgtggacggccagtgcgtgtgcagcgcc
ggctacacgggcgaggactgctcgtcgctcacctgcctgaacgactgcagcggccgcggc
cagtgcttcaacggcgtgtgcatctgcgagacgggctaccagggcgaggactgcagccag
ctggcctgcctcaacaactgccaccaccgcgggcagtgcatcaacgggcgctgccagtgc
gacgccggcttccagggcgaggactgctcggagctgtcctgccccaacgactgccgcggc
cggggacggtgcgtcaacgggcagtgcgtgtgcgacgagggcttcgccggcgaggactgc
aacgtgcgcacgtgcccgtccgactgctacgggcgcggcgactgcgtggacggcaagtgc
gtgtgccacgccggcttcaccggcgaggactgcagcgagctcagctgccccaacgactgc
caggaccgcgggcgctgcgtctcgggccagtgcgtgtgcgacgagggcttcaccggcgag
gactgcagcctgaaggcctgccccaacgactgcctgggccgcggccgctgcgacgacgga
cgctgcgtctgccaggagggcttcgccggcgacgactgctccgagctcacgtgcccggcc
aactgcaacggcaggggccgctgcgtcaacggcgcgtgccagtgcgaggcgggctacgag
ggcgacgactgcggccagcgcagctgcctgaacaactgccacgggctcggccgctgcatc
gacggacagtgcgtctgcgacgagggctacatcggagaggattgctcactggtgtcgcct
ccgaaggacctgaccgtgacggacgtgaacaccgagtcggtcaacctcacctggttcaac
gagatgctggtgacggagtacctggtcacctacgtgcccacggcgcccggcggcctgcag
ctggagcgcacggtgcccggcgaccgcaccgcggccaccatcgacgacctggagccgggc
atcgagtacttgatcaaagtccacgccgtcctgagcaaccagaagagcgtgccagtcagt
gcccgcgtagctacccatctcccgcagccagatggcctcaagtttaagtccgtcagagat
acatcggtggaggtgttgtgggaccagcttgacattccgcacgacggctgggagctctcc
ttcaggaacactaaagaggagaatgggaaaatcttgaatgcgctgaaccgggggcagacc
agcttcgagcagtttggactcggacccggccaggaatacgaggtgtcgctcggggtcgtc
aaaaacaacaccagaggacctcagacgacccagactgttatgacaaaactggacactcca
cggcagctggaggtgcgtgatgtggccgacaacagcgcggtcatctcctggtctctgcca
gtcgcccagatcgacaccatcaccctgtccttcggcccctcctccaaccccgccgacagg
aagtccgtggacctggcccccacgcagacacagcacacggccgaaggcctgagtccagac
acggagtacgaggtgaccctggtgtccaagagaggagacatgagcagcgaccctgcctct
gacaccttcaccacagacctagatgcccccatagatctccaggttgtgggtcagacagac
agcactgtgaccctggggtggacaaacagccaggctgatgtgagcaagtaccgggtcaaa
ttcagccccctgtctggaacggctcatggagaggagcttttccctgagggagcaggagat
aagacggaggtcaccatcacaggcctgaagccagggactgagtatggcatcggcgtgaac
gctgtgaaaaatgagagggagagcctgccagcgacagtcaccgccatgaccgacctggac
ccaccgagggacctggaggtgaccgaggccaccgagacgaccatgaccgcggcgtggaag
aggccgagggccaagatcggcaattacaggctggccgtggagtctgcggacggcagacga
gacgagctggaggtgccgggtgacgccaccacccacaccctcaccggtctcaccccaggc
gtgcgctacaccatcaccctggtggcggagcgcgggcggaagaggagcgagcccgtcagt
acatctgcttccacagaggagcggaagccgcaggtggggaacctgacggtgtccgatgtg
tcctgggacagctttaacgtgtcctggaccatcgaggtgggcgagtttgagggctttgtc
ctcgaggtggccaacctggagggcggccctgagcggcagaatctcacgctgtccggcgac
gccctcagtctgttcatgtccggcctgagccccagctccacctatatgatcgctctctat
ggcctccacaagggctacctcctggggcctgtctatactgtcgccaccacagaggccgag
ccagagattgagcacctctttgtgtccgacatcacccccgagagtttccggattgcctgg
accgccgaggacggcgtcttcgatcgattcgtgatcaaagttagggatgccaaaaagctt
gctcacccgcaagagtttaatgtcgctggtgacgagaggaccaaagtcatgactgatcta
atggggggcactgagtatgagattgaactgtacggagtcactctggaacaccgatcccag
cctttaactgctgttgccagaacaggcctcggagctccccggggcatcagcttctccgat
atcaccgccacgtcttccatggtccactggaccgttccccgcgccaacgtggactcatac
cgcgtgacgtttgtgccccttcagggaggcaatcccgagacggtgacgattgacggggtt
cagtcagaaactctgcttcccaacctgattcctggggagacttatcaagtgaccgtggtt
gctgtcaagggcttggaagagagcgaacctatcactgacacaatgactacagccctggat
atgccacgcagtctgaccgcggtcaacgtcactgacaccgaggctttgttgctatggcag
cctgccattgccaccgtggacggctatgtcatcacatacaccgcagacacagggtcccca
gtgacggagcgagtgtcggggaacattgtggagtttgagatgaactccctgagtcccaac
accccgtacaccgtcagcgtctacgccaccaaagatgcgctgaagagccaggccgtcacc
acagacttcaccacagagctcgatgctccgcgggatttggtggccactaacgtcctgacg
gacagcgccatgctcacctggaccccccctcgcggcgccatcagcggctacatcctgacc
ttcatggcgtccgacggcacagtcagggaagtggtcctcgacgcctctgaaacttcctac
agtgcgactgacttgagcagctccatggagtatgtggtgcggctgcaggctgtcgccggc
gccaagaggagtcgtcacatctccaccacattcaccacagctggagtcctttacagcttt
cctaaggactgctcacaggcactactgaatggggagagtgcatctggcctgtacaccatc
tatgtgggaggaaacaagaaccagcccatggaagtgtactgtgacatggccaccgatggc
ggtggatgggtggtattcctcagacgtcagagcgggaaaactgagttcttcaggaattgg
aggaactacacaaatggcttcggggacatgatggatgaattctggctcggtctgtccaac
ctgcacaagctcaccacctcaggtccgtatgagctgcgggtggacctgagagatggcact
gagtctgtgtacgcttactacgacaagatggttgttggcgagccacgaggccgctacaag
attcagatcggttcctacagtggcacagctggtgactctatgacctaccaccagaataga
cccttctccacgtacgacaatgacaatgacgttgccgtcaccaactgtgccctgtcgtac
aagggtgccttctggtacaagaactgccaccgggtcaacctcatgggaagatatggagac
aacagccacagcaagggcatcaattggttccattggaagggccacgagcactctgtcccc
ttcgcagagatgaagatcaggccagtcaactttggcaacttagaaggccggaggaaaaga
tcgtag
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integrated database retrieval system
