Sardina pilchardus (sardine): 134101012
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Entry
134101012 CDS
T10667
Symbol
depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
134101012 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134101012 (depdc5)
Membrane trafficking [BR:
spil04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
134101012 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
134101012
NCBI-ProteinID:
XP_062410532
LinkDB
All DBs
Position
14:10818413..10852067
Genome browser
AA seq
1610 aa
AA seq
DB search
MTIKTNKSYKLVVHKKGFGGSDDELMMNPKVFPQVALGDIVEIAHPNDEYSPLLLQVKSL
KEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWRLK
KSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMS
CEMWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVLFSRTFYSAKSMDEFPEIL
RGSIRQDHEGRFYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLRGADGFPSGQN
STAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVNRLLMILTKQRMI
DNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHWINHSFYTSKSQGSCSS
FTPRIKLAGRKAHAEKAKSSKENSLGAPKDSENSLPIQVDYDAYDAQVFRLPGPSRASRS
TNFRSSRERETSGRKSWGSADASGGGPGTGGVSPPTRGPGMGGPDEQRSLASEDSLGRVS
NILLIPRGPPAQYEVSSSLGYTSTREILEKMMESQRDWSAPGRFTVGSAESTLHVRPGGY
TPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEPIQIHHQTRQNMVELQGSEQRDP
AHTSAELLELAYHEATGRRAASRHGGENGLYINAGIEDFSGSPSSSNSTGTPVNRGSSFD
DFSSGGPDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDKQSLQNDYTEGC
YDLLPHTDLDRRDEDAPAMSAPQVFEEFICQRLMQGYQIIVQNSRKQAPPSSAPPLSSSP
LYSRGLVSRRRPEEEESVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLC
PPHAEAHFLSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGG
GARRVADSDGRWDVYGEGFGVPGSDWAPLDGFIRFVEGLNRIRRRHRSDRIIRKGGAMKG
LQVTGPLSPYPPEPMAPPLGKKGTSALSALLELDQTQKTLEEQQQAAQHGVKAAGPLSEA
STGTMATTYVDSPRKDTGFLLDFIRSPRSSYIYHSQISAEQPAASVAESGLTDKAAGQSA
AAGAGTQSSGDAASGVSTETSGHVGAGPLTLSSASTLLEILEAIKHPTTGVQLLPEQKGL
PPNSFISAEVVHWLVSTVEGVDTQGMAVDIVQKMLDEGLIAHASGDAMRTFVYGFYFYRI
VAEKDGERAPSTQLPPTGAGVWSTAVLEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWL
PSRPASYASRHSSFSRSFGGRSQAAALLAAATVPEQKTVTLDVDVNNRSDRTEWCSCYYH
GNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPL
RAQLFIPLNIQCLLREGSDNLFEGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFP
SENKPQYIHVTGTVFLQLPYSKRKYPSGQQRRRRNSTTSATQSLFGADEHVGYYWAYNTM
LTKAWRTGLLGDERLGERLLRDFTDFCANKDNRLAAFWESCLEKMNSSAP
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaaacaaacaaatcgtacaagctggtggttcacaaaaaaggctttggtgga
agtgatgatgagctgatgatgaaccccaaggtgttcccccaggtggccctgggggacatc
gtggagatcgctcatcccaacgacgagtacagtcctctgctgctgcaagtaaagagcctg
aaagaagacctgcagaaagagacaatcagtgtggaccaaacagtggcccaggccttcaag
ctccgtgcctaccaggatgtcatcatcaacattgtggatcctaaggatgtgacccttgac
cttgtggagctcaccttcaaagaccagtacattgggcgaggagacatgtggagactgaag
aagagtttggtcagcacctgtgcatacgtgacccagaaagttgagtttgctggaatcagg
gcccaggccagtgaactatgggtcaaaggtgaaaaggtcacgtgtgggtacatcagtgag
gacaccagggtggtgttcaggtccacttcagcgatggtgtacatcttcatccagatgagt
tgtgaaatgtgggactttgatatctatggagacctttactttgaaaaggctgttaatggt
ttcctgtcagatctctttaccaaatggaaggagaagaactgcagccatgaggtgacggtg
gtgctgttctccaggaccttctactcagctaaatctatggacgagtttcctgagatcctg
aggggttctatcagacaggaccatgagggacgcttttatgaggacttctacagagtggtg
gcccaaaatgaaaggcgagatgagtggacatctctcctcatcaccatcaagaaactcttc
atccagtaccctgtcctggtgcgcctcagaggagcagatggcttcccctctggtcagaac
tccacagcagctcaggggaactatctggaagctattaacctctccttcaacgtgttcgac
aagcactacatcaaccgcaacttcgaccgcacagggcagatgtccgtcgtgatcacaccg
ggcgtgggggtgttcgaggtgaaccgcctgctcatgatcctcaccaaacagcgcatgata
gacaacggtatcggagtggacttggtgtgcatgggagagcagccactccatgctgttcct
ctgttcaagctgcataaccggacagtaccaggagactccaggctgggggatgactacaac
ctgccccactggatcaaccacagcttctacacgtccaaaagccaaggcagctgcagttct
tttacccccaggataaagctggcaggacgcaaggcccatgcagagaaagccaagagcagt
aaagagaactccctgggagcccctaaagactcggagaacagcttgcccatccaggtggac
tacgacgcctatgacgcccaggtgttccggttgccagggccctctcgagcttcacgcagc
accaacttcaggtcgagtcgtgagagggagaccagtggtcggaagagctgggggtcggcc
gacgccagtggtgggggcccagggacaggaggggtgtccccgccaacgaggggccccgga
atggggggcccagacgagcagcggagcctggcgtccgaggacagcctggggcgcgtgtcc
aacatcctcctgatcccccgcggacccccagcccagtacgaggtcagcagctcactgggg
tacaccagcaccagagagatcctggagaagatgatggagtcccagcgggactggagcgcc
ccgggtcgttttacggtgggcagcgccgagtccactctgcacgtgcggccgggcggctac
accccccagcgggcgcttattaacccctttgccccctcacgcatgcccatgaagctcacc
tccaaccgccgccgctggatgcacaccttccctgtgggcccgtcgggagaacccatccag
atccaccaccagacgcggcagaacatggtggagctgcagggcagcgagcagagagacccc
gcccacacctccgcggagctgctggagctggcctatcacgaggccactggcaggagagca
gcttctcgtcatggtggagagaatggcctttacatcaacgcaggaatagaggatttctct
ggcagcccctccagcagcaacagcactggaacccctgttaatcgtggatcctcattcgat
gacttctcctctggtggtcctgacccaaccctgctgctgtctgcccccccgacagtgccc
agtttctgctgcacagtgggggtggactggaagtccctgaccacacccgcctgcctcccc
ctcaccaccgactacttccccgacaaacagtcgctccagaacgactacaccgagggctgc
tacgacctgctaccccacacagacctggacaggcgcgatgaggacgcaccagcgatgtcg
gcacctcaagtgtttgaggagttcatctgtcagaggctcatgcagggctaccaaatcatc
gtccaaaattccaggaaacaggcaccgccttcttctgccccgcctctcagcagcagccca
ctctactctagaggtctggtgtctcggcgcaggccagaggaggaggagagtgtgtactgg
ctcagcatgggccgcacattccacaaagtctgcctgaaggacaagatcatcaccgtcaca
cgctacttgcccaagtacccgtacgagtcggcacagatccagtacagctacagcctgtgc
ccgcctcacgccgaggcccacttcctgtcctgttgggtggagttcagccacgagaggctg
gaggagtacaagtggaactacctggaccagtacatctgctcggccggctccgaggacttc
agtctgattgattcgttgaagttctggcgcacacgtttcctactgctcccggctggcgga
ggggcgcgacgcgttgcggacagcgatggccgatgggacgtgtacggcgagggcttcggg
gtgccgggctctgattgggcgccgctggatggcttcatccgctttgtggaggggctgaac
cgcattcgccgccgacaccgctccgaccgcatcatcaggaaaggtggagccatgaagggc
ttgcaggtgactggccctctctccccctacccccctgagcccatggcgccccctctgggc
aagaagggaacctcggcgctctccgcactgctggagctggatcagactcaaaagactctt
gaggagcagcagcaggccgcccaacatggcgtcaaggcagccgggcccctcagtgaagcc
tccaccgggaccatggcaaccacctatgtcgacagcccccgaaaggacaccggcttcctt
ctggattttatccggagccctcgctcctcatacatctatcactctcagatttcagctgaa
caaccagcggccagtgtggctgagtctgggctgactgacaaagcagccggccaatcagct
gctgccggtgctggtactcagtccagtggagacgcagcctctggagtttccacggaaacc
agtggccatgttggggcaggaccgctcaccctgtcctccgcttcaacactcctggagatc
ctcgaggccatcaagcaccccaccactggagtgcagctcttgccagagcagaagggcctg
ccccccaacagcttcatcagtgctgaggtggtgcactggctcgtcagcaccgtggaggga
gtggacacccagggaatggctgtggacatcgtgcagaaaatgctggatgagggtctgata
gcccatgcctcgggagatgccatgcgcacctttgtgtacggcttctatttctacaggata
gtggcagagaaggatggtgagagggccccctccacccagcttccccccacaggtgccggc
gtctggtcgacggcggtgcttgaggacttcgctctgttccagaggaagtggtttgaggtg
gccttcgttctggaggagcgtcggccctgcgacctgcccgccttcttgttgccatggcta
cccagccggccggcctcgtatgcaagtaggcacagttctttcagccgcagcttcggagga
cgcagccaggccgccgcactgctagcagctgccacggtgccggagcagaagacggtcacc
ttggacgtcgacgtcaacaatcgcagcgatcgcaccgagtggtgcagctgctattaccat
ggcaacttctccctgaacgctgccttcgagatcaagctgcactggatggccgtcacggcg
gcagtcctcttcgagatggtgcagggttggcataggaaggcagcgtcgtgtgggttcctg
ctggtgcccgtgctggaggtgcccttcgctctgccctcctacctgtacggagacccgctc
cgtgcccagctcttcatccccctcaacatccagtgcctgctcagagagggatccgacaac
ctgtttgaaggatttgagccagagacatactgggaccgtatgcagcttttccaggaagcc
attctctacaggtttgggttcgtccaggataaattctcagcctcagccttcaactttcca
tcggagaacaagccccagtacatccacgtcacaggcactgtgttcctccagttgccctac
tctaagcgcaagtaccccagcgggcagcagcggcgccggcgcaactccaccacctcggcc
acgcagagcctgtttggggcggacgagcacgtgggctactactgggcctacaacaccatg
ctgaccaaggcctggcgcacgggcctgctcggcgacgagaggctgggcgagaggctgctc
cgcgacttcaccgacttctgcgccaacaaggacaaccggctggcggccttctgggagagt
tgcctggagaagatgaactctagtgccccatga
DBGET
integrated database retrieval system
