Sardina pilchardus (sardine): 134101342
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Entry
134101342 CDS
T10667
Name
(RefSeq) integrin alpha-2-like
KO
K06481
integrin alpha 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03271
Virion - Rotavirus
spil04145
Phagosome
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04810
Regulation of actin cytoskeleton
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
134101342
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134101342
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134101342
09144 Cellular community - eukaryotes
04510 Focal adhesion
134101342
09142 Cell motility
04820 Cytoskeleton in muscle cells
134101342
04810 Regulation of actin cytoskeleton
134101342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134101342
04515 Cell adhesion molecules [BR:
spil04515
]
134101342
04090 CD molecules [BR:
spil04090
]
134101342
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
134101342
Exosomal proteins of bladder cancer cells
134101342
Cell adhesion molecules [BR:
spil04515
]
Integrins
Integrin alpha subunits
134101342
CD molecules [BR:
spil04090
]
Proteins
134101342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_alpha
FN3_IL27B_N
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
134101342
NCBI-ProteinID:
XP_062410940
LinkDB
All DBs
Position
14:complement(18001057..18026063)
Genome browser
AA seq
1188 aa
AA seq
DB search
MDIFLHKMLTLLFLIQCWLIPHCQSFNVGTSGAKVFSGPAVEEFGYTVQQFTNHLGKWLL
VGSPWSGTPDNRKGDIYKCDITGPGSNCERLNLQNTVAVPNVMDVNVNMSLGLTLMRSKN
NDNFVTCGPLWAQRCGSQNYYPGVCAEVTPRFSSLPAFAPALQTCGGPMDVAIVLDGSNS
IYPFKPVAEFLVKLLENLDIGPQKTQVSVLQYGEDTQFQFKLNSYQKKEAMLAAASIIQQ
KGGLETRTFEAIQYASRYAFLPENGGRAGATKVMVVVTDGESHDKELRDQVIAACEQEKI
TRFSIAVLGYYNRNNIDPKTLIAEIKSIASTPTERHYFNVSEEAALLKIAGTLGDRIFNI
EGTGKGSNFQMEFAQVGFSAYQTSKKDSLMLGAVGAYGWSGTVVHQTGQKFETLPQKVFE
TTLDDRNHSSYLGYSVTSLSHGSTEYFVAGAPRANHSGLVVVYTLDSSAQASIIDTQRGT
QVGSYFGSVMCPLDVNRDGVTDVLLVGAPMFMSEDKKETGKVYVFSITNGILSDQGVLVG
PSAVENARFGMAMSAVPDLNLDGFSDVVVGAPLEDNSHGVIYVYFGDKTTVRLQHSQRIV
GLKVDPALQYFGRFLDGSGDMNGDTIPDISVGAYGKVVQLWSRGVAVVTAQASFTPDKIS
ILKKDCRLGGRLASCFTARVCFSASFRPIRPIGPVVITYNLTLDADLQSSRVSSRGQFSN
SERTVQKDISISTQPRCEEHIVYVQEAPDFVSSVALRVDIALQNPAANPVLDAFSKDAWE
FFIPFSKDCGTDDVCESNLQLSVKRSGQQSSSSPMLVSQKNRILSFTVSVTNKKENAYNT
RVSATYSKNLFYASITQPSDGTEVKCTSVAESQSLSCQVGYPALRKDQTVTFELIFDFNF
DQLQKEARVDFEAESDSKEETPTDNEASLSIPVQYDSEIIMTREANMNFYVVEKEDNVQP
TVANFDDIGPEFNFMLKASTVNFPVNLVYLTVSMPTKTKGGNPLLYVTGVKTAPPSEVSC
DVSGLINPLKIGSSPHSATFNKETFGDMQKLDCKTSTCESMKCVFKDLAIKSQYFVNVTA
RIWKGTFVSASFQAVTLSVSADMETAQPELIVITDKHREVDVTISKKGGKGEVPVGVIVG
SALGGLLLLAIATAVLWKLGFFKRKYKPLMKDGDADEGETEALQNNTP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggacatatttcttcacaagatgcttacgttgctgtttttgattcaatgctggttgatt
cctcattgccagagtttcaatgtggggacgtcaggagccaaagtgttctctggacctgca
gtggaggagtttggttacaccgttcagcaattcaccaatcacctagggaaatggctgttg
gtgggttctccctggagtggaacccctgataataggaaaggggacatttacaagtgtgat
atcacaggcccaggatccaactgtgagagactgaatcttcaaaacacagtcgctgtacca
aatgtgatggatgtcaacgtcaacatgagtctgggtctgacactcatgcgatcaaaaaac
aatgacaatttcgtgacatgcgggccactctgggcccagaggtgtggcagtcagaattat
taccctggggtgtgtgctgaagtcaccccacgattcagctcacttcctgcatttgctcct
gcccttcaaacatgtggaggaccaatggatgtagctattgtattggatggttcaaacagc
atctatccatttaagccagttgctgaatttcttgtgaaacttttggagaaccttgacatt
ggtccccaaaagacccaggtcagcgtcttacagtacggagaggacacacagttccagttc
aagttgaattcataccaaaaaaaagaggccatgctagccgctgcaagcatcatccaacag
aaagggggactggagaccagaacatttgaagccattcagtatgccagtcgatatgctttt
ctccctgagaatggcggtcgtgcaggtgctactaaagtaatggtggtggtgactgacggg
gagtcccacgacaaagaattgcgagaccaagtcattgcagcgtgtgagcaggagaagatc
acccgcttcagtattgccgtccttggatactacaacaggaacaacatagatcccaaaact
ctaattgctgaaatcaagtctatagccagcaccccaacggaaagacactattttaatgtg
tctgaggaagctgccctgctgaagatagcaggaaccctgggagatcgcattttcaacatt
gagggaactggcaagggtagtaatttccagatggagtttgcccaagttggtttcagtgct
tatcagaccagtaaaaaggatagcctgatgctgggagctgttggagcgtatgggtggagc
ggaacggttgttcatcaaacgggccagaaatttgagacgctgccccagaaagtctttgag
accactctggatgacaggaaccacagttcttatctgggctactcagtgacatcgctgagt
cacggcagcacggagtactttgttgctggagccccgcgggcgaaccactctggcctggtg
gtggtctacacactggacagctcagcacaggcctccatcatagacacccagaggggcact
caggtgggctcctactttggcagtgtgatgtgtccactggatgtgaatagagatggcgtg
actgacgtgctgctggtgggagctcccatgttcatgagtgaggacaagaaggagacgggg
aaggtctacgtcttctccatcaccaacgggattctgagtgaccagggcgtcctggtgggt
ccttccgctgtggagaatgcccgatttgggatggccatgtctgcagtaccggacctcaac
ctggacggcttcagtgacgttgtggtgggagcacctctggaggacaacagccatggagtc
atttacgtctattttggagataagaccactgtccgattgcaacactcacagagaattgtg
gggctgaaggtggaccctgcgcttcagtactttggacgcttcctggacggcagcggagat
atgaatggagacaccatcccagacatctcagtgggggcttacgggaaggtggtgcagctc
tggtccagaggcgtggctgtcgtcactgctcaggcctccttcacgcctgacaagatcagc
atcctgaaaaaggactgccgcttagggggaaggctggcctcgtgtttcactgccagagtg
tgtttcagtgccagcttcaggcccattaggcctataggaccagtggtcataacatacaac
ctcactctggatgcggacctgcagtcctccagagtcagttccagaggccagttcagtaac
tctgagcgcactgtacagaaagacataagcatcagcacacagccacggtgtgaggagcac
atagtttatgtgcaggaggctcctgactttgtcagctccgttgctttgcgagtggacatt
gccctccagaatccagctgccaaccccgtcttggacgcattcagtaaagatgcgtgggag
ttttttatcccattttccaaggactgtggcacagatgacgtgtgtgagagcaacctgcag
ctgagtgtgaagaggagcggacagcagtcaagttcctctcccatgttggtgagccagaag
aacagaatactgtccttcactgtgtcagtgaccaacaagaaagagaatgcctacaacacc
agagtctccgccacatattccaagaacctcttctacgcctccatcacacagcctagtgac
ggcacagaggtgaagtgcacgtcagtggccgaatctcaaagcctgtcctgccaagtgggc
taccctgctctgaggaaagaccaaacggtgacatttgaattaatctttgacttcaatttt
gaccaactgcaaaaagaagccagagttgactttgaagccgaaagtgacagcaaagaagaa
actcccacggataacgaggcctctctctccattccggttcagtatgactctgagatcatc
atgaccagggaggccaacatgaatttttatgtggttgaaaaggaggacaatgtccagcct
actgttgcaaactttgacgacattggccctgaattcaacttcatgctgaaggcctccaca
gtcaactttccagttaacctggtctatcttactgtctccatgccaaccaaaaccaaagga
gggaatccactgctttacgtgactggagtgaagacagcaccacccagtgaagtgagctgt
gatgtaagcgggctgatcaacccgctgaagatagggtccagtccccattcagccaccttt
aacaaagagaccttcggagacatgcagaaactggactgtaagacctcgacgtgtgaatca
atgaaatgtgtcttcaaagacctggccatcaagagccagtactttgtgaatgtgacagct
cggatatggaagggcacttttgtttctgcatcatttcaggctgtgactctcagcgtaagt
gctgacatggagactgcccagccagagctgatagtgattacagacaaacaccgtgaggtt
gatgtgaccatcagcaaaaaaggcgggaaaggtgaggtgcccgttggtgtcatcgtgggg
agtgctctgggtggtttgcttcttctggctatagcgacggcagtactgtggaagcttggg
ttcttcaagaggaagtacaagccactgatgaaggacggtgacgcggatgagggtgaaact
gaggcgctgcaaaacaacaccccctag
DBGET
integrated database retrieval system