Sardina pilchardus (sardine): 134101356
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Entry
134101356 CDS
T10667
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134101356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134101356
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134101356
04147 Exosome [BR:
spil04147
]
134101356
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
134101356
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
134101356
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134101356
Exosomal proteins of other cancer cells
134101356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CC_Bre1
FPP
MscS_porin
DUF1664
Tropomyosin
Rod_CreS
HH_AprE
PUMA_CC
Baculo_PEP_C
DUF7310
FKBP15
ADIP
DUF3450
CENP-F_leu_zip
Sec10_N
ZapB
DUF4407
DegS
TPR_MLP1_2
DUF3141
Spike_torovirin
TPR
Laminin_II
APG6_N
GIT_CC
DUF5660
Motif
Other DBs
NCBI-GeneID:
134101356
NCBI-ProteinID:
XP_062410962
LinkDB
All DBs
Position
14:complement(31682757..31684480)
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AA seq
386 aa
AA seq
DB search
MRGSSYSQKSLAVSSSSRVRVQSPSPSRCRGSSYNRGRAGYQNGVSAVEVGTEIHQQHAN
EKEEMQELNVRFAGYIDKVQALEQRNAQLQAELAALQGRFKGGPGGLAEEYEIKFKEMRD
LIEALTAEKGAADIERGYIEEEVEVWRLKLEEELALKEEAEMILREFRQDVDCATLQKAE
LEKRVEQLVAEIEFLKKLHDEEVADLLKQIEDSKVTVELDSDRPDLAAYLRNMRAEIEAV
AARNVQEAEKWYKGKFDTLKEQAGKAEDQMKTMKEEITTYQTQVTDLQNQIDGVRARNAA
LEQQLEDMEAAHLDKMSGLEAIIAQLENQLCETKMEMSKYMQDYQELLHIKLKLDAEIAT
YRKLLEGEEKRLGISGESHTAIQDSA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcctcatactcccagaagtccttggcggtcagcagctccagccgagtccgg
gtgcaaagtccatctccgtcccgctgcaggggctcctcctacaaccgtggccgtgctggg
taccagaatggcgtgtctgctgttgaggtgggcaccgagatccaccagcagcatgccaac
gagaaggaggaaatgcaggagctgaacgtgcgctttgccggctacattgacaaggtgcag
gccctggaacaaaggaacgcccagctgcaggcagagctggccgcactgcagggccgcttc
aagggaggccccggtgggctcgccgaagagtatgagatcaaattcaaggagatgagggac
ctgattgaggctctgactgctgaaaagggtgcggccgacattgagaggggttacattgag
gaagaggtggaagtgtggaggctcaaactggaggaagagctggccctcaaagaggaggct
gagatgatcctgcgagagttccgtcaggatgtggattgtgccacactacagaaagcagag
ctggagaagcgtgtggaacagctggtggctgagattgagtttttgaagaagctgcatgat
gaagaggtggctgaccttctgaagcagattgaggactccaaggtcactgtggagctggac
tcagaccggcctgacctggctgcctacctgcgcaacatgcgtgccgaaatcgaggctgtg
gccgctcgcaacgtccaggaggcagagaagtggtacaagggcaaattcgacacactgaaa
gaacaggcaggcaaagctgaggaccagatgaagaccatgaaggaggagatcactacttat
caaacccaggtgaccgacctgcagaaccagattgatggagtgagagcccgtaatgctgct
ctggaacagcagctggaggatatggaggcagctcacctggacaaaatgtcagggctggag
gccatcattgctcagctggagaaccagctctgtgagaccaagatggagatgagcaaatac
atgcaggactatcaagagctgctgcacatcaaactgaagcttgacgctgagatcgccacc
tacaggaagctgctggaaggcgaggagaagaggctgggaatctcaggcgagagccacaca
gccatccaggactctgcctaa
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