Sardina pilchardus (sardine): 134101641
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Entry
134101641 CDS
T10667
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03420
Nucleotide excision repair
spil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134101641 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
134101641 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
spil03051
]
134101641 (rad23aa)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134101641 (rad23aa)
Proteasome [BR:
spil03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
134101641 (rad23aa)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
134101641 (rad23aa)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_3
DUF1421
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
134101641
NCBI-ProteinID:
XP_062411368
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Position
1:11361850..11378274
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AA seq
388 aa
AA seq
DB search
MQITLKTLQQQTFQIEINEDLTVKVLKERIEAEKGKDNFPVTGLKLIYAGKILQDDTAIK
EYKIDEKNFVVVMVSKAKPPPAPSAPPEPPKAEASASASASASASASAGAATAAATGSTA
TPPPPVHAAIPIPPDEDRPATRPPAQQPTTPTTPVSQGRSAPPTEGFGDLALSALVTGPA
YEAMVTEIMSMGYERDRVEAALRASFNNPDRAVEYLLTGIPTTVPVQETSPPAANLSSET
HSSEGENPLEFLRSQAQFQSMRQVIQQNPSLLPALLQQLGQDNPALLQQISQHQEQFIQM
LNEPQGEGGELGEGPDTADPSEPGDLGAMVDDLASGNYIQVTAQEKEAIERLKALGFPEA
LVVQAYFACEKNENLAANFLLNQNFDDD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctaaagacgctgcaacaacaaactttccaaattgaaatcaatgaagac
ctaacagtgaaggttttgaaagagcgaatcgaggcggagaaaggcaaagacaactttccc
gtcacgggactgaagctcatttatgcaggcaaaatcttgcaagatgacaccgccatcaaa
gagtacaagatcgacgagaagaacttcgtggtggtgatggtgtctaaggccaaacctcct
cccgccccctcggccccccctgagccccccaaggctgaggcgtcggcgtctgcgtctgcg
tctgcgtcagcgtcagcatcagcaggggcggcaaccgcggcggcaacgggttccacggcg
acgcctccccctcccgtccacgccgccatccccatcccccccgacgaggaccggcccgcc
actcggccgccggcgcagcagcccacgacaccgacgacgccggtctcgcagggcaggtct
gctccaccaacagaaggttttggcgatcttgctttatcagctctggtgacgggcccggcg
tacgaggcgatggtgacggagatcatgtcgatgggttacgagcgtgaccgcgtggaggcc
gccctgagagccagcttcaacaaccccgaccgagccgtggagtacctcctcaccggaatc
ccaaccaccgtcccagtgcaagagaccagcccaccagcagctaacctgtcctctgagacg
cactcgtcagaaggtgagaaccctctggagttcctgcgttctcaggcccagttccagagc
atgcggcaggtgatccaacagaacccgtccctgctccccgccctcctccagcagctgggc
caggacaacccagcactactgcagcaaatcagccagcaccaggagcagttcatccagatg
ttgaacgagccgcagggggagggaggggagctgggggaggggcctgacacggccgacccc
tccgagcccggcgacctgggcgccatggtggacgacctcgcctccggcaactacatccag
gtcacggcccaggagaaggaggccattgagaggttaaaagcgttgggcttccctgaggca
ctggtggtgcaggcctacttcgcctgtgagaagaacgagaacctcgctgccaatttcctc
ctcaaccagaactttgacgacgactga
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