| Entry |
|
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| Symbol |
ccdc50a
|
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| Name |
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
|
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| KO |
| K25949 | coiled-coil domain-containing protein 50 |
|
|---|
| Organism |
spil Sardina pilchardus (sardine)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:spil00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:spil04131]
134101802 (ccdc50a)
Membrane trafficking [BR:spil04131]
Autophagy
Other autophagy associated proteins
Others
134101802 (ccdc50a)
|
|---|
| SSDB |
|
|---|
| Motif |
|
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| Other DBs |
|
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| LinkDB |
|
|---|
| Position |
15:4286237..4313609
|
|---|
| AA seq |
627 aa
MADFSIDQENLPGVKEVVRDFAVLEDHCLAHNLQEQEIESHLASNINRSRLVQQDLLVAK
RLQEEEDLQAKEKKQQQHQELEQIDSEIAQVIQEQLVRQAEQQRQQEEKDAAIARKLQEK
EEKRRQKQQLEDEYYEEKGARRVPSDSDYPYAEDGRNKPLDSGRRRYPEYDPPEQGSPRR
HEYPSKDGYQDKRGLNPDHYGPPEGRERQGRGAAAEEWEEEPVVRKKERPTRPPPPSYTT
ERDRDRDRDRERDRDRDRDRERDRDRDRDKDRERKRDRDGRRDGERDRQRARSRDGLDTR
ESDRLQDRDAERDRHGHGPRRRDDQDWSREQDRGRDGYESKGGRRDKGRDVYETKDGYRE
RDRDREREKRPHNGRARSREKELDERTGSWSGDEELRNRLRLPSGPGDVFEEPRSPSSPR
REALNLDNDVHRGRSHSRDLPSLSDSPLDRGRGGRGDFGVVEAQQGLGRMGLREQELREQ
ELQEMRDMEVARRMQEEELKASQMGKRAAQAQAAQVAQDEEIARMLMEEEKKVFKKPRDR
EREKPPTDRRKPEGDWRPAQEEAVRPRSRDEYDQQRARNHKPSRPAPPRTQDYENVPAGG
YGYPEPHYPARPTTRPDAAYKGSYYKQ |
|---|
| NT seq |
1884 nt +upstreamnt +downstreamnt
atggctgattttagtatcgatcaggaaaacctgccaggagtaaaagaggtggttcgggac
tttgctgtattggaggatcactgcctggcccacaacctgcaggaacaagagattgagagc
catttggcgtccaacatcaacaggagccgcctcgtgcagcaggaccttctagtggccaaa
cgtctgcaggaggaggaagacctgcaagctaaggaaaagaagcagcaacagcaccaagaa
ctggagcagattgacagtgagatagcccaggtgattcaggagcagcttgttcggcaggcg
gagcagcagagacaacaggaggagaaggacgcggctatcgctcgtaagctccaggagaag
gaggagaagagacgacagaagcagcaacttgaggatgaatactacgaggagaaaggagct
cgacgtgtcccctccgactcggactacccctacgcggaggacggccgcaataagccgttg
gactccggccggaggaggtaccccgagtacgatccaccggagcaggggagtccccggcgg
cacgagtaccccagcaaggacgggtaccaggacaaacggggcctcaaccccgaccactac
ggccccccggagggcagggagaggcagggccgaggggctgcagcggaggagtgggaggaa
gagccggtggtccgcaagaaagagaggcctacccgacctcctccgcccagctacaccacc
gagagggaccgggatcgggatagagaccgagagagagacagggatcgggaccgggatcga
gagagagacagggaccgggatcgagataaggaccgagagaggaagagggaccgagatgga
cggagggatggcgagcgagaccggcagagggcccgaagccgagacgggctggacacgagg
gagtctgaccggctccaagatcgagatgcggagcgggaccgacacggacacggaccccgg
agacgagatgaccaagactggtcccgggagcaagaccgaggcagagacggatacgagagc
aaaggtggacgtagagacaaaggccgagacgtgtacgagaccaaagatggatatcgggag
agagaccgagatcgggagagggagaagaggccgcataacgggcgcgcgaggagcagagag
aaggaactggacgagcgcacgggctcctggtctggcgatgaggagctaaggaaccgcctg
cgtctcccctcggggcccggggacgtgtttgaggagccccgcagccctagctccccccgg
agggaggccctgaacctggacaacgatgtccatagagggcgctctcactctagggatctc
ccctccctctccgactctcctctggatagaggtcgtggaggtcgcggggactttggcgtg
gtggaggcgcagcagggcctgggccgcatggggctgagggagcaggagctgcgggagcag
gagctgcaggagatgcgcgacatggaggtggcgcggcggatgcaagaggaggagctcaag
gccagtcagatgggcaagcgggcagcccaggcccaggctgcccaagtggcacaggatgag
gaaattgcacggatgttaatggaggaggagaagaaggtctttaagaagccacgggaccga
gagcgagagaagccgccgacggacaggaggaaaccagaaggcgactggaggccagcacaa
gaggaggcagtacggcccagatcacgagacgagtacgaccagcagagggcccgcaatcat
aaaccatccaggcctgctcctccacgcacacaagactatgagaacgtgccggctggtggc
tatggctacccagagccccactaccccgcacggcctaccacccgacccgatgctgcctac
aaaggttcctactataagcagtga |
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