Sardina pilchardus (sardine): 134101809
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Entry
134101809 CDS
T10667
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134101809 (hmg20b)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
134101809 (hmg20b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
MlaC
BRE1
GIT_CC
PI3K_P85_iSH2
DUF4407
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-GeneID:
134101809
NCBI-ProteinID:
XP_062411606
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Position
15:complement(23335825..23341394)
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AA seq
320 aa
AA seq
DB search
MSQNTKHHQHDTGRFSAMGVKQEVNDHATSHRGAHHPPESAHEENTVAMSSVQPVKKRGW
PKGKKRKKVLPNGPKAPVTGYVRFLNERREQIRALHPDLPFPEITKRLGAEWSRLAPHDK
QRFLDEAEREKVQYARELREYQQSEAYQITTAKVQDKKIKREELSSVIINSSGQTGLKSS
DFSNGFDIPIFTEEFLDQNKAREAELRRLRKANVEFEEQNAVLQKHIANMYSAKERLEAE
LGQDEQRTQALQRHLLGLKQTLVSSLSGVPLPGTGETPSISTLDSYLSRLSNVLENSPNE
HRALLVKLQEVLAHLDSEKM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaatacgaaacaccaccagcatgacacagggagattcagtgccatgggtgtg
aagcaggaggtgaatgatcatgcaactagtcacagaggtgcccaccatcctccagaatca
gcacacgaggagaatactgtggcaatgtcatcagttcaacctgtgaaaaagcgcggctgg
cctaagggaaagaagagaaagaaggtgctccccaatggccctaaggctccagtcacaggc
tacgtgcgcttcctgaacgaacgccgggaacagatccgtgccttgcaccctgacctaccc
ttcccagagatcacaaaaaggctgggtgcagagtggagccgattggctcctcatgacaag
cagcgcttcctggacgaggctgagcgggagaaagtgcagtatgcccgagaactgcgagaa
taccagcagagtgaagcttaccagattaccacggcaaaagtccaggacaagaagatcaag
agagaggagttatcgtcagtaataattaacagctctggacaaacaggattaaagtcttca
gatttttccaacggatttgacatacccattttcactgaggagtttttggatcaaaataag
gcccgcgaggcggagctgcgacggctgcgcaaggccaacgtggagttcgaggagcagaac
gccgtgctgcagaagcacatcgccaacatgtacagcgccaaggagcggctggaggccgag
ctgggccaagacgagcagcgcacccaggctctgcagaggcacctgctgggcctcaaacag
acgctcgtcagcagcctctccggcgtgcccctcccaggtacaggtgagacgccctcgatc
agcaccctggactcctacctgagccgtctgagtaacgtgctggagaacagccccaatgag
caccgtgccttattggtcaagctacaggaagtcctcgcccatttagatagtgagaagatg
tga
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