Sardina pilchardus (sardine): 134101814
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Entry
134101814 CDS
T10667
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
134101814 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
134101814
NCBI-ProteinID:
XP_062411611
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Position
15:24233186..24239653
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AA seq
740 aa
AA seq
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MRRSLAPSQVAKRRSGDSDDDDDWHPEQTRKRRKGDPDCRENLISPYRKPLTQLTNRPVC
VDSGQHEAFIRSILSKPFKIPIANYTGALGIRALGLKRAGVRKALHDPFEVDALVLYEPP
VVSAHDMIKADKDKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIPDSFGCIMADE
MGLGKTLQCITLMWTLLRQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVTPLAID
GGSKEEIDRKLERFNAQHGLRVPSPILIISYETFRLHAAVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMNSQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRATGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSELY
KRFLRQAKPVESLQGGKISVSSLSSITSLKKLCNHPSLIYDKCVEGEEGFEGALDLFPSG
YTTKAVEPQLSGKMLVLDYILAMTKSTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCFIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FSLNEETTSDTHDRFRCKRCVNGRQVRPPPEEADCTSDLSLWQHCSDKKGLKDPMLSAAW
DAAVSFAFHQRSHEDQRGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcttagcaccaagtcaagttgccaaaagaagaagtggtgattccgacgac
gacgatgactggcatcctgagcagacaaggaaaagaagaaagggagatccggactgccga
gagaacttaatttccccttacagaaaacctctcacacagttaaccaatcgaccagtatgt
gtggacagcggtcagcacgaggcctttattcgcagcatcctttcgaagccattcaaaatt
cccatagccaactacacaggcgctctgggaatacgagctctgggcctgaagcgggccggt
gtcaggaaggctcttcacgacccgtttgaggtggacgcactggttctttatgagccaccg
gttgtgagtgcccatgacatgatcaaagctgacaaagacaagcttcctgttcatgttgtt
gtcgatccagtacttggcaaagtacttaggcctcatcagcgagagggcgtcaagttcctt
tgggactgcgtgacagggaggcgtatccctgactcgttcggctgcatcatggcggatgag
atgggtctgggcaagactctgcagtgcatcacgctcatgtggacactgttgcgtcaaagc
ccagactgtaagccggagatagacaaggtcatcgtggtctctccctccagcttggtgcgc
aactggtacaacgaagtcggcaaatggctgggaggacgtgtcacgccactggctattgac
ggcggctcaaaagaggagattgatcgcaagctagagcgcttcaacgcacagcatggctta
agggtgccttctccgatccttatcatttcgtacgaaacgttccgtctgcacgctgcagtc
ctgcacaaggggaaagtcggcctggtcatatgtgacgagggtcatcgactgaagaactca
gacaaccagacctaccaggcactgaatgccatgaattcccagagacgagtgctcatatct
ggcactcccattcagaacgacctgctggagtacttcagcctggtgcactttgtcaatgcc
ggaatccttggcactgcgcaggaatttaagaagcgctttgagcttcccatcctgaagggc
cgtgatgcagacgccagtgataaggacagggccactggagaggagaaactcaaagagctc
attagcattgtgaacagatgcctgattagaaggacttcagacatactctccaagtatctc
ccagtgaagatcgagcaggttgtctgttgcagactcacccctctgcagagtgagctgtac
aagcgcttcctgcggcaggccaagcctgtggagagccttcaggggggcaagatcagcgtc
tcctccctctcctccatcacctcgctcaagaaactctgcaaccatccttctctcatctat
gacaagtgtgtggagggagaggagggctttgagggggctctggatctcttcccgtctggc
tacaccacaaaggctgtggagccacagctctctgggaaaatgctggtgctggattatata
ctcgctatgacaaaaagtacaacaagcgataaagtggtactggtctccaactacacccaa
actctggatcttttcgagaagttgtgtcgaactcgaagatatctctatgttcgcctggac
ggaacaatgtccatcaagaaacgggcaaagatagtggagaggttcaacagtccttctaac
cccgagttcatcttcatgctgagcagtaaggcaggagggtgtggcctcaacctgattgga
gccaatcggctggtgatgttcgaccccgactggaatccagccaatgacgagcaggccatg
gcccgtgtgtggagggatgggcagaagaagacctgcttcatctacaggctgctttctacg
ggtactattgaggagaagatcctgcagaggcaagcccataagaaggcccttagcagctgt
gtggtggatgaggagcaggacgtggagagacacttctcccttggagagctgcgagagctc
ttctccctcaacgaggagaccaccagcgacacgcatgaccggttccgctgcaagcgctgc
gtgaacgggcgccaggtgcggccgcccccggaggaggccgactgcaccagtgacctgtcc
ctctggcagcactgctcggacaagaagggcctgaaggaccccatgctctcggccgcctgg
gacgcggccgtctcgtttgccttccaccagcgctctcacgaggaccagagaggagtggtg
tga
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