Sardina pilchardus (sardine): 134102068
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Entry
134102068 CDS
T10667
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134102068 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134102068
NCBI-ProteinID:
XP_062412025
LinkDB
All DBs
Position
15:7388303..7422895
Genome browser
AA seq
2361 aa
AA seq
DB search
MAAVLQQVLERTELSRLPKTVQNKLEKYILDQQSEIDSLKAHNEQFRVDSEQQYFEIEKR
FADSQDRFVSQTQELKRLKEEFAKNEEELRCVREKKKESEASHTKLESQQSQLQKARDEL
ESEKRELVRTLERRAQEVEHQSEDVKRLSNKLVEVSTAKLEFQMKLDELESSEVSIKYKE
KRMDQEKGLLQNQIDWLNSELKTKSEELLSLSRQRGNEVLELKCSLENRNDEVARLQDQI
TNLKTSNENSQKRAEDLINKLKEVKEMQATSEDKFRNELNANIKLCNLYKSAAADSDSKS
EELRGAVEELQKLLKEAGEANKASEARLEEMDGQRAKTEEKLKERIAELEKELENANELL
SDGKHRGSVAVVSALTEEQLTTMSPTAAAISKIRPGMKLTEIYSAYIDAQEQLQLERMEN
RRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSTKLEQAVKEVHRLQKEADESN
KRSSVLDRENKRCEQQLSDLSQQVRVLLIELEEARGNHVSRDEEADSSADVSSSSEVISQ
HLVTFRSVEELQQQNQRLLAALRDLGEAQERDEIETTSKRRCELEASLEKAQSELEQLKE
QRTMQLQLAESIVRQRDMYRMLLAQATGGAVPPPGAVGDEISLTSTPRRSPAATPTTGTP
TAITLPESTEVVEAKAALKQLLEVFGAYKKERVESERALSDQNEKLQEQISELRSQNAKI
STQLEFASKRYEMLQDNVEGYRKEISTLREKEQKMAAVAQKNEQAVNTLTQELNIANEKI
NMAESRVESLRKEKELLKLTETRLVQEKESICTQQRGQSLLLTNLQAIQTTLERSEMETR
QHLNNQIEKQEREIGQLQKRLEQEVEQRHMLSRNHDVQQLEVKRQLEVQQAQHQRTREQL
TAAQLELSSLRMQQNSRESLPSPKAQDASGTSGVPSGVQMEMEELRGRLRQAETELEEQK
ERLQTITASREQYRTMSISLEESLEKEKEVTTQAKASVEARLKTAEEERKRLEAKLQEAE
RVSKSTQGDKTKAVAAVEQQVAELKKTINNMKSDLEKAQERAKTATVQEQQAIQDCQEQA
RLAAEAQSKYEQEVLLHAADVQALQAAKAQAQQAGSVRQRLEQSAHRASAQLMEARVSWE
EQEKIIKEELSKEASRSEELQKQNSLLHDQIQSLSDKMATSAQQTSNQSTFNLTNSEDKS
HEQVLEILKFVRKEKEIAETRYEIAQSESLRQRLRVQQLEHELKELQDSLNAEREKMQVT
ARTLAQHEDLMKKTETMNVLVESNKLLREEKDRLQLELEQTHAKVRKLEQDLLPIQESNA
ELSEKSGMLQAEKKLLEEDIKRWKARTQHLLTQQKDTDPEEYKRLHTERDVHVKRIQQLS
EENSKLKADATRSSGTVTSLQSQLHTLRENLGKLTSERDGAKRELDAKNHDLQEKLKTIT
QVKKIGRRYKTQYEELKEEHDKMVAAAAATPAPDPEAMQTLTQELQTVKESHTQSQARTT
QLEAQIETLNKTVGEREAETRTAQEELTRLRQEVQEKSSQEEALRHQATEKEERTKKTMI
AARQKIRQVIGEKEALQKETEELRQQREELEVRVSALRSQYEGRLSRQERELRDLREQHD
RHAEPREEPAEPGPSKVPEQQRTTEQRPKTLKPTPAADRGSASSSEPPTANIKPTPVVAT
PSKPAASQGNKPTPRASIRPMVTPAPAPTPTPTATVMPTTQETQEAQQSSEGPVEHMYGS
TSGTVRSTSPNVQSSSLASSMMATPQSQNQATAFVQPTQQAVAPSEPANQEPAPATVMME
ATPSSQVERPSTSTAVFGTVSATPGSSMNKRLREEEQEGTSADTETPDEPSEPPKKLRLV
QRVGPEEEVMEDSTEAESVVPGESQEAPDATQELEDYPVLADAEEEAGGSQSVPVETSQE
GEGTQQGIIVIVSDSETEGEQEGESEEEVEEEEEEEQEDYEEEEEEEEEEDEDDGGMGEE
GEESNEGSGSGEGNEAYEGDEQEGAEATDPGTETEESLGATDSTQQRVADSQTFSVEPTN
ASVETHSVDSPREAAPISSSTPRLPQSPRRPPHPLPPRLNILPPPGPELAPPSLVQRFPV
RFHSSGRSMPLTPGANSSSMMSETQMTFDNDDRIVPSTPILVVPNRSDSFTEPLQSPQVA
TVPRFRFGTLEDMTQSTSSHSDLGQLASQGGLGMYESPMFLASQEEESGGRSVPTTPLQV
AAPVTVFSETVSMDTFSMETPEPASQSVPLVTTSTPSLTATGGAGGGDDRDEVLMEPEAE
GVAVDVNVEPVSQTETEEPGQATDETNLPSTSQEPSSSSADTSSTQQPKGRGGTGRQLQR
WTHSGSGPAKRGMGFRDRSLK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgctacagcaggtgctggaacggacagagttgtccagactgccaaaaacc
gttcaaaacaaattggaaaaatatattttagaccagcaaagtgagatcgacagtctgaaa
gcgcataacgaacagtttcgcgtggatagcgaacaacagtactttgagatcgaaaagcgg
ttcgctgacagtcaagatcggttcgtgtcacagacacaagaacttaagaggcttaaggaa
gaatttgctaaaaacgaagaagagctgagatgcgtgcgcgaaaagaaaaaagaatccgaa
gcttctcatacaaagctggaatctcaacagagccagctccagaaagcccgggatgagctg
gagtcagagaagagggaacttgtccgcaccctggaacggagggctcaggaggtcgaacac
cagagcgaggatgttaagcggttgagtaacaaactggtggaggtgagcacagccaagctg
gagtttcagatgaagctggatgagctggagtcctctgaggtttccattaagtacaaagag
aagcgtatggatcaggagaagggactgctgcagaatcagattgactggctgaactctgag
ctgaagaccaagagcgaagagctgctcagcctctcccgccaaaggggcaatgaggtcctg
gagctcaagtgcagcctggagaacagaaatgatgaggtcgcaaggcttcaggaccaaata
accaacttgaaaacatcaaatgaaaactctcagaaaagagctgaagatctcatcaacaaa
ctgaaggaggtcaaagagatgcaagcaacatctgaagacaaattccgtaatgagctgaat
gcaaacatcaaactctgcaacctctataagagtgctgcagcagattctgactccaagagt
gaggagctgagaggcgctgtggaggaactgcagaagctccttaaagaggcaggggaggcc
aataaggcctcggaggctcgtctggaggagatggatggacagagagccaagacggaggag
aaactgaaagagcggattgcggagctggagaaggaattggagaacgccaacgagcttcta
tctgatggcaaacacagagggagtgttgcagttgtgtcagctctgaccgaagagcagctg
accaccatgtcccccacggctgcagccatcagcaagatcagacctgggatgaaactcacg
gagatttacagcgcctacatcgacgcccaggagcagctgcagctggagcgcatggagaac
cggcgcgtgaacaagtacctggacgacatcgtgcaggaggtggaggccaaggcgcccatc
ctcaagaggcagcgcgacgagcacgagcgcatgcagaagtccgtggccagcctctccacc
aagctggagcaggccgtcaaggaagtgcatcgtctccagaaggaggctgacgagtccaac
aagcggtcatctgtgctggacagagagaacaagcgctgtgagcagcagctctctgacctc
tcccagcaggtgcgcgtgctgctgatcgagctggaggaggcgcgggggaaccacgtctcg
cgggacgaagaggccgacagctcggccgacgtcagcagctcctcggaggtcatctcgcag
cacctggtgaccttccgcagcgtggaggagctgcagcagcagaaccagcggctcctggcg
gccctgcgggacctcggcgaggcccaggagcgcgacgagatcgagaccacctccaagagg
cgctgtgagttggaggccagcctggagaaggcccagagtgagctggagcagttgaaggag
cagaggaccatgcagctgcagctggccgagtccatcgtgcgccagagagacatgtaccgc
atgcttctggcccaggccaccgggggcgcagtacctccaccaggtgcagtgggagacgag
atctctctgacctccactccacgccgctctcctgcggccacacccaccacaggaacaccc
acggccatcaccctgcccgagtccaccgaggtggtggaggccaaggctgctctcaaacag
ctgctggaggtgtttggagcctataagaaggagcgagtggagagtgagcgagcgctatcg
gaccagaatgagaagctgcaggagcagatctccgagctgcgctcccagaacgccaagatc
tccacccagctggagtttgcctccaaacggtatgagatgctgcaggataatgtggagggc
tacaggaaggagatctctacactgagggagaaagagcagaagatggcagccgtcgcccag
aaaaacgagcaggccgtcaacaccctcacccaggaactcaacatcgccaacgagaaaatc
aacatggctgagtcgcgtgtagagtccctgcgtaaggaaaaggagctgctgaagctgacg
gagacgcggctggtccaggagaaggagtccatctgcactcagcagagaggacagagcctg
ctgctcaccaacctgcaggccatccagaccactctggagcgttcggagatggagactcgt
cagcacctgaataaccagattgagaagcaggagcgggagatcggccagctgcagaagagg
ctggagcaggaggtggagcagaggcacatgctcagccgcaaccacgacgtgcagcagttg
gaggtgaagcggcagctggaggtgcagcaggcgcagcaccagcgcacgcgcgagcagctg
acggccgcccagctggagctgtccagcctgcgcatgcagcagaactcccgcgagagcctg
ccctcgcccaaggcccaggacgcttccggaacctcgggagtgccgtcaggtgttcagatg
gagatggaggagctgcgcggtcgcctgcggcaggcggagacggagctggaggagcagaag
gagcggctgcagaccatcacggccagcagggagcagtatcgcaccatgtccatcagcctg
gaggagtccctggagaaggagaaggaggtgaccactcaggccaaggcgtctgtggaggcg
cgtctgaagactgcggaggaggagcgcaagcggctggaggcgaagcttcaggaggccgag
cgcgtcagcaagagcacgcagggagacaagaccaaggcggtagccgccgtcgagcagcag
gtggctgagctgaagaagaccattaacaacatgaagtctgacctggagaaggcacaggag
agagcaaaaacggcaaccgttcaggaacagcaggccattcaggactgccaggagcaggcc
cgcctggcggcagaggcgcagtccaagtacgagcaggaggtgctgctgcacgcggcggac
gtgcaggcgctgcaggcggccaaggcccaggcccagcaggccggcagcgtgcggcagcgg
ctggagcagagcgcccacagggccagcgcccagctcatggaggcccgcgtctcctgggag
gagcaggagaaaatcatcaaggaggagctgtcgaaggaggcgtcgcgctcggaggagctg
cagaagcagaacagcctcctgcacgatcagatccagagtctcagcgacaagatggccacc
agcgcccagcagaccagcaaccagagcaccttcaacctcaccaacagcgaggacaagtcc
cacgagcaggtgctggagatcctcaagtttgtgcgtaaggagaaggagatcgccgagacg
cggtacgagatcgcgcagtcggagagcctgcgtcagcgtctgcgcgtgcagcagctggag
cacgagctgaaggagctgcaggacagcctgaacgccgagagggagaagatgcaggtgacg
gcgcgaacgctggcgcagcacgaggatctgatgaagaagacagagaccatgaacgtgctg
gtggagagcaacaagctcctccgcgaggagaaggaccgcctgcagctggagctggagcag
acacatgccaaggtgcgtaagctggagcaagacctgctgcccatccaggagtccaacgca
gagctgagtgagaagagtgggatgctgcaggccgagaagaagctcctggaggaggacatc
aagcgctggaaagcccgcacacagcatctgctgacccagcagaaggacacagaccctgag
gagtacaagcgcctgcacacagagagagacgttcacgtcaaacgcatccagcagctctct
gaggagaacagcaagctcaaggcagatgccaccaggagcagtggcacggtgacatcgctg
cagtcgcagctgcacaccctgcgggagaacctgggcaagctgacgtccgagcgggacggg
gccaagcgcgagctggacgccaagaaccacgacctgcaggagaagctcaagaccatcaca
caggtcaagaagatcggccgccgctacaagacccagtacgaggagctcaaggaggagcac
gacaagatggtggcagcggccgcagcgaccccggctccagacccagaggccatgcagacc
ctgacccaggagctgcagaccgtcaaagagtctcacacccagagccaggcccgcaccacc
cagctggaggcacagatagagaccctcaacaagacggtgggcgagcgggaggcggagacg
cggacggcacaggaggagctgactcgcctgaggcaggaggtgcaggagaagagcagccag
gaggaggcgctgcgtcaccaggcgacggagaaggaggagcgcaccaagaagaccatgatt
gcagcccgccagaagatccgccaggtcatcggagagaaggaggcgctgcagaaggagacg
gaggagctgcgtcagcagcgtgaggagctggaggtgcgcgtgagcgcgctccgctcgcag
tacgaagggcgcctgtcgcggcaggagcgcgagctgcgggacctccgcgagcagcacgac
cgccacgccgagccccgcgaggagcccgccgaacccgggcccagcaaggtgcctgaacag
cagaggacaactgaacagagaccaaaaaccctgaagcccacccctgcagcagaccgcgga
agcgccagctcctctgagccccccacggccaacatcaagcccacaccggtggtggcgacg
cccagcaagcctgcagccagccagggcaacaagcccacgccgcgcgccagcatccggccc
atggtcaccccggcgcccgcgcccaccccaacccccaccgccaccgtcatgcccaccacc
caggagacccaggaggcccagcagtcgagcgagggcccggtggagcacatgtacggcagc
accagcggcacggtgcgctccaccagccccaacgtgcagtcctcctcgctggcctcctcc
atgatggccaccccccagagccagaaccaggccaccgccttcgtccagcccacgcagcag
gccgtggcgcccagtgagccggccaatcaggagccggcgcccgccaccgtcatgatggag
gccacacccagctcacaggtggagaggccctccacctccacggcagtgtttggcacagtg
tccgctacgccgggttcctccatgaacaagcgcctgcgggaggaggagcaggagggcacg
agtgcggacacagagacccccgacgagcccagtgagccccccaagaaactccgcctcgtc
cagagagttgggccagaggaggaggtgatggaggacagcacagaggctgagagtgttgtt
cccggcgaaagccaggaggctccagatgccacacaggagcttgaggactacccagtgtta
gctgatgcggaggaggaggcaggcggctctcagtcggtccccgtagagacctcgcaggag
ggcgaaggcacacagcagggcatcatcgtcatcgtcagcgactccgagaccgagggcgag
caggagggcgagagcgaggaagaggtggaggaggaggaagaggaagagcaggaggactat
gaggaggaggaggaggaagaggaggaggaggacgaagacgacggtggcatgggcgaggag
ggcgaggagagcaacgaggggagcggcagcggagagggcaacgaggcgtacgagggcgac
gagcaagagggcgcggaggcgaccgacccaggcaccgagacggaggagagcctcggggcg
acggactccacccagcagcgtgtggccgactcccagacgttcagcgtggagccaactaat
gctagcgtggagactcattccgtggactcacccagagaggcggcgccgatcagcagttcg
acgcctcgcctcccacagtcgccaaggcgaccaccgcatcccttgcccccccgcctgaac
attcttcctccacccggccccgagctggctcccccctcactggtgcagcgcttcccagtc
cgattccattcctcagggcggtccatgcctctcactccaggagccaacagtagctccatg
atgtctgaaacgcaaatgacctttgacaatgatgaccgcattgtccccagcacgcccatt
ctggtggtcccgaaccgctccgacagcttcactgagccactgcaatcgcctcaggtggcc
actgtccctcggttccgcttcggcacgttggaggacatgacccagtccacatcgtctcac
tctgatctaggccagctggcctctcaaggagggctgggtatgtatgagagtcccatgttc
ctggcgtcccaagaggaggagtctggaggacgcagtgtccccaccacacctttacaagtg
gcagctccagtgaccgttttctctgagactgtctccatggacaccttctctatggagacc
ccggagccggcctcccagtccgttcccctggtaaccacatccacacccagcctcactgcc
actggcggtgctggcggaggagacgaccgagacgaggtcctcatggagccagaagctgaa
ggggtggctgtggatgtgaatgtggagcccgtgtcccaaacggaaacagaggagcccgga
caagccactgatgagaccaatctcccttcaaccagccaggagccctcctccagctccgca
gacactagtagcacccagcaacccaaaggcagaggaggaaccggccgacagctccagcgc
tggacacattcagggtctggccctgccaagagaggcatgggattccgagatcgttcgttg
aagtaa
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integrated database retrieval system
