Sardina pilchardus (sardine): 134102663
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Entry
134102663 CDS
T10667
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134102663 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134102663 (tmc6b)
03037 Cilium and associated proteins [BR:
spil03037
]
134102663 (tmc6b)
Transporters [BR:
spil02000
]
Other transporters
Pores ion channels [TC:
1
]
134102663 (tmc6b)
Cilium and associated proteins [BR:
spil03037
]
Other cilia and associated proteins
Stereociliary proteins
134102663 (tmc6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134102663
NCBI-ProteinID:
XP_062412816
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All DBs
Position
15:complement(13298212..13321724)
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AA seq
818 aa
AA seq
DB search
MARNVCFDTYSDHLETEMESPIDEAAVHDSFSHLIQEQVQGFSGPVDALEMDQLDLDDEA
RDDVGYLVNPVLRPEEGHQQGDPRDHWSSATLRILSSMPSRTIGRSRGAIISQYYNRTMQ
LRRRRQSRPSIRDFSHSSRPSIRGYGGVESDMGDLQEEEAKRERLVNNLQNLSVSDRVRM
LRAMPLSVSEKTELRHLALRHKERSFSRSTIPCCSQFKYYLIIAARQTWYSWLSMLSSLQ
LWQTALKTVSGRFGTGVVSYFAFLRTLLFFNIFLFSMTGLFLVLPQAVFPPVPSSTTGLS
GLELLTGGGYFTESVMFYGYYTNVTLKKDCVPKDSVSSTPNEVECSRGLSYNIPLAYFFT
IGGTFFVTGIILVYTMSKLFGQSFRIDKSQSILAMKVFCSWDFKVIKKTSVKLQSENVST
QLKELLAEISHKKGEAPIRQRLSRISMHLLAWTLCVGSILASVFAVYYFSEFMHKDLQVR
ARNRRSSDSASLLALPVVVSSINLLLPGFFNIVASLEKYDSPSVRNYVSISRNLMLKVSV
LGILCYHWLGRIAPDRDNIVCWETFVGQELYRFLVMDFIFTVLDTFFGELLWRLFSQKVL
KRRRKPVFDIARNVLELIYGQTLAWIGLLFTPLLPAVQILKLICLFYMKKTSLMMNCQVP
RKPWRASQMTTIFITLLCFPSFLGAAVCVTCTMWSIPPSPSCGPFRGLKTMIQSGKLWVK
QLESANSNLAWLTWVHTYLVENPVIFLFLTAMIFCIVIYFHTQVVDGQRKIITLLQDQIE
NEGEDKKFLITKLQAIHEQSRPLSSQRIRGASEDSSYY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaatgtgtgctttgatacatattcagaccaccttgaaacagaaatggaaagc
cccattgatgaagcagcagttcatgactccttcagtcacttgatacaggaacaggttcag
ggcttttccggtcctgttgatgccctagagatggatcagttggaccttgacgatgaggcc
agagatgatgtaggatacttggtaaacccagtgttgcgaccggaagaaggccaccaacaa
ggagatccacgtgaccactggtcctctgctactctaagaattttgtcctcgatgccaagc
cgcacgattggccgcagtcgtggtgcaatcatctctcagtactataaccgcactatgcag
ttgcgccgccgcaggcaaagtcggccatctatacgtgacttctcccattcttcccggccc
agtatccgaggttatggtggcgtggagtcagacatgggggatttacaagaggaggaagct
aagagagagcgccttgtgaacaacttgcaaaacctaagtgttagtgatcgtgtgcgaatg
cttagggccatgcccctaagtgtttcagagaagactgaactcaggcatctggcactgcgg
cataaagagcgttcattctctagaagcaccatcccttgctgcagtcaatttaaatattat
ctgatcatagctgccagacaaacttggtatagttggctgtcaatgctgtcatctttgcag
ctttggcaaacagcactgaagacagtgagcggccgttttggcacaggcgttgtctcgtat
tttgctttccttagaactcttcttttcttcaacatcttcctcttctctatgactgggctc
ttcttagtactcccacaggctgtgttccccccagtgccctccagcaccacaggactgtct
ggtctggaactgctcactggagggggttatttcacagagtcagtaatgttctatggctac
tacacaaatgtcacactgaagaaagactgtgttccaaaagattccgtttcatcaactcca
aatgaagtagagtgttctagaggtctttcctataacataccccttgcctacttctttacc
attggaggtaccttctttgtcaccggcatcattcttgtttacactatgtcaaagttattt
gggcagagtttcaggattgataaatcccagagtatcttggccatgaaagtcttctgctcc
tgggattttaaagtcatcaagaaaacttctgtcaaactgcaatcggaaaatgtctccaca
cagcttaaagagcttttagcagagatcagtcataaaaaaggggaagcacccatccgtcaa
aggctaagtcgaatctcaatgcatttgctagcctggaccttgtgtgtgggaagcatcttg
gctagcgtctttgctgtctactacttctctgagttcatgcataaggacctccaggtccga
gcaagaaacagaagatcatctgacagcgctagcctgcttgctctgcctgtggtagtgtcc
agcattaatcttctgttgccagggttctttaatatagtggcctcattggagaagtatgac
tcccccagtgtgcgcaactatgtttctatcagcaggaaccttatgttgaaagtgagtgtc
cttggcatcttatgctaccattggttgggtcgcattgcacctgaccgggacaacattgtg
tgttgggagacatttgttggccaggagctatacagattccttgtgatggatttcatcttc
actgtactggatacattctttggggaattgttgtggaggttgttttcccagaaagtgctg
aagaggaggaggaaacctgtgtttgacattgcacggaatgttctggagctgatctatggg
caaacacttgcttggattggtttgctgtttacgccattgttgccggcagtacaaattcta
aaactcatctgcctgttttacatgaagaagaccagtttgatgatgaactgtcaggttcca
agaaaaccatggcgtgcaagtcagatgaccaccatcttcattaccctgctatgttttccg
tcatttcttggcgcagctgtgtgtgtcacatgtacaatgtggtcaatcccaccatcccca
agctgtggaccattccgtggcctgaagaccatgattcagtcgggaaaactctgggttaaa
cagttagagagtgccaactctaacttggcctggctcacttgggtgcacacttacttagtg
gagaaccctgtgatcttcctttttcttactgccatgatcttctgcattgtcatctacttc
cacacgcaggtggtagatggacagaggaagataattactctccttcaagaccaaattgaa
aatgaaggggaggataaaaagtttctgatcaccaaactgcaggcaatccatgaacagagt
cgacctttgtcttcccaacgaatcagaggagctagtgaggactctagttattattga
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