Sardina pilchardus (sardine): 134102689
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Entry
134102689 CDS
T10667
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
spil Sardina pilchardus (sardine)
Brite
Membrane trafficking [BR:
spil04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
134102689 (hps3)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134102689
NCBI-ProteinID:
XP_062412861
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Position
15:complement(31316527..31330369)
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AA seq
1079 aa
AA seq
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MVHVYNCHPFASQHIVPTEQEPGPVCCGGDALFVVSAGGCKIEAYQMQEEGCPLICRFAT
MGTVHNILHSQTGDYLVTIEEKNKATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSASLR
GIPKEQMEIIEIPLFEPPLCVSCCPLTGDLLVGCAKSLVLFKLRRQTLNDRLSVLDFERL
LILHIPGWTPSQVALCGSYVAMQADLEVLVFQLQKPQTGKEQQQDKEEEERDQQLQLHAL
VPKDMISRSDRLSVSDSGIGDNEMKKEMAGHLEPDDFYMFPKNQEMLGEQAKDCGVCVTL
ELTGVESEAGFGTGVNYILYRRFAPDFFQGNSVEDTCLHSLQLYPLSTSNQEATGEAKSP
DPACVFCFFSLPNTGYMYSIMGSAELVSSYQYPEKAQQAVLSSHFLHVITKNALQCFSVR
CSAVAARAEDPYIDTTVKACPPYTMEVCALRIQLFIGLKALCHDRNHIVLLTAADVESRE
DMERAARKSLESKDHKTLTGILLAVGIEPSNNPALESLLSRSFLDRHNWLMDTLRSAAGS
SRKTSITKPKEPSESGHGWNLYVVNTVSSLTLYREMVEYSKKYEVSDPFSLSCVHLLSEA
HLLLRASLLEPLLEAAERAEVQQAFRENCAQLGDCYSRFDKRDCHQALPYYKMSGLSVTE
VIQRNMCPADSPPEYGKGFLFFLRHSLDEEDMEELSQETANTVLDIFSVAEPTQLPHVVS
SPFMLKSDPAVTLGHLERLEAAGAPSVTLTLAKASLALRMGDMQLYQQQMERHAEMLQVY
GFIEEPKLLLLGGGRSVVPTRLARHLHLAQQGLLVAAAVALHENNRVKLEEADLFFQELC
KEAAEEASHPQLLVDFWEALLVASSQDAVIQELLFRLTSVYIDHISRQQQPSAKPLKTAD
DLMNSCVHYGQLYPWVGILTPAHLRCKQAYQEDLQKLQSLLCGPTLDVSSILPLLEQLPD
VDNAGLSVHVLCATRLGHTESSIERLLDRCPQAIISFAQDELKNDKMALWWQKLFPELCE
RTRTAGDDNSILLTALKETLVVVAMELNPLEFLELLPDDGAAQFFLPHLLECSQRNLMT
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtttataattgccacccgtttgcttcccaacacattgtgcccaccgagcaa
gaacccgggccggtttgttgcggcggagatgcgcttttcgtcgtctcagctggaggatgc
aagatcgaagcgtaccagatgcaagaggaaggatgccctctcatctgtcgatttgctaca
atgggaacagtccataacatattgcacagtcagacaggagactatcttgtcaccatcgag
gagaaaaataaagccacatatctccgtgcgtacactaattggcgataccaggcggtcgag
aagacacgagtaggagtccgactgcttggccacttgctacggggttcagcgtcgctccga
ggcattcccaaagagcagatggagatcatcgaaattccgctattcgagccccctctttgt
gtatcatgttgcccgctcacaggtgacctcctagtgggctgcgccaaaagtttggtgctc
ttcaagttgcggcggcagacgcttaacgaccgtctctctgttctggacttcgagcgtcta
ctcatccttcatatcccaggctggacgccttcgcaggtggccctgtgcggcagctatgtg
gccatgcaggcagacttggaggtgcttgtctttcagctgcagaagcctcaaactggcaaa
gagcagcaacaggacaaggaggaagaagagagggaccaacagctccaactacatgccctg
gttccaaaggatatgatctccagatcggacaggctgagtgtcagcgactctggtattggt
gacaatgaaatgaaaaaggagatggcaggccacctggaaccagatgacttctatatgttc
ccaaagaaccaagagatgcttggggagcaggccaaggactgcggtgtatgtgttactctg
gagttgactggtgtggagagtgaggccggctttggcacaggagttaactacatcttatac
aggcgctttgctcctgatttcttccaaggcaacagtgtggaggatacctgtctgcattct
ctccagctctatccactgtccaccagtaaccaggaggctactggtgaggccaaatctccc
gatcctgcctgcgtgttctgtttcttctccctgcccaacactggctacatgtacagcatc
atgggctcagcagagctggtctcgtcttaccagtacccagagaaggcccagcaggccgtg
ctcagtagccatttcctgcatgttatcaccaagaatgcccttcagtgtttctctgtgcga
tgtagtgcggtggccgccagggctgaggacccctacatcgacaccaccgtgaaggcttgt
cctccctacaccatggaggtttgtgcattgcgcatccagctcttcatcggtctgaaggcc
ctttgccacgacaggaaccacattgtccttctgaccgcagcggacgtggagagcagagag
gacatggagagagcggcccggaagagtcttgaatcaaaagatcacaaaactctaacgggg
attttgctagcggtaggtatagagccatccaacaaccccgctttggagagcctcctatcc
aggtcctttcttgataggcacaactggctcatggacacattgagatcagcagcaggaagc
tctaggaagacttccatcaccaagcctaaggagccaagtgagagtggccatggctggaac
ctctatgtggtcaacaccgtctccagtctcaccctctacagagagatggtggaatacagt
aagaagtatgaggtgtccgaccccttctctctgagctgcgtccacctgctgagtgaggcc
catctgctgctgcgggcctcactgctggagcccctgctggaggctgccgagagggccgag
gtgcagcaggccttcagggagaactgtgcccagctgggagactgctacagcaggtttgac
aagagggactgccaccaggcgctgccttactacaagatgtccggactgtcggtcaccgag
gtgatccagaggaacatgtgcccggcggactctcctccggagtatggcaaaggcttcctg
ttcttcctcaggcactccctggatgaagaggacatggaggagctcagtcaggagacggcc
aacacggtgctggacatcttcagcgtggcggagccgacacagctgcctcacgtggtcagc
agccccttcatgctgaagagcgacccggccgtcaccctgggccacctggagcggctggag
gccgccggcgccccctcggtcacgctcaccctggccaaggcctccctggcgctgcgcatg
ggggacatgcagctgtaccagcagcagatggagcgccacgcagagatgctgcaggtgtac
ggcttcatcgaggagcccaagctgctgctgctgggtggagggaggagcgtagtgcccacg
cggctggcgcgccacctccacctcgcccagcagggcctgctggtggccgccgccgtggca
ctgcacgagaacaacagggtcaagctggaggaggccgacctcttcttccaggagctgtgt
aaggaggccgcggaggaggcgagccaccctcagctgctggtggacttctgggaggccctg
ctggtggcctcctcccaggacgcggtcatccaggagctgctcttccgcctcacgtccgtc
tacatcgaccacatcagccgccagcagcagcccagcgctaagccactcaagaccgcagac
gacctgatgaactcctgtgtccattatggtcagctctacccctgggttggcattctgacg
cctgcacatctgcgctgcaaacaggcctaccaggaggacctgcagaagcttcagtctctg
ctgtgcggccccacgctggacgtgtcgtccatcctccctctgctggagcagctgcctgac
gtggacaacgcagggctgagcgtgcacgtgctgtgcgccacccggctcggacacaccgag
agctccatcgagcgcctgctggaccgctgcccacaggccatcatctcattcgcccaagat
gagctaaagaacgacaaaatggctctgtggtggcagaagctgtttccagagctgtgtgag
agaacccgaacagcaggagatgacaacagcatcttactgactgcactgaaagaaacactt
gtcgtggttgccatggagctgaatcccttggaattcctggaactgttgccagacgacggt
gcagcgcagttcttcctgccgcatcttctggagtgtagtcagaggaacctgatgacatga
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