KEGG   Sardina pilchardus (sardine): 134102706
Entry
134102706         CDS       T10667                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spil03009]
    134102706 (wdr18)
Ribosome biogenesis [BR:spil03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    134102706 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd WDR54 Ge1_WD40
Other DBs
NCBI-GeneID: 134102706
NCBI-ProteinID: XP_062412888
LinkDB
Position
15:complement(1119554..1216268)
AA seq 431 aa
MSTPMEVVVSADSSGQLWNCAVFDLHSGTNLLSYRGGNSSSRSLTLLNGEYILGAQLGKN
FINVWEVQRKDQLQQKIVCPGIVTCLTTSPDGLYVLAGIADAIYLWEVSTGNLLAILNRH
YQDLTCLRFTDDSSHFISGGKDNLALIWSLVSVVQLDSSHTPEPRHVLSRHSLPVTDIHC
GLMGAQARVATASLDQTVKLWEISSGELLLSVLFDVSIMSVTLDPCEYFLFCGGSDGTIY
QVSLCSPSLSRDKTFQSDSEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDVQS
KQSIRTINHKGPVTNACIMLAPANMFLPESRPAAPLPRFSRHLNPTEQGDSTATAGMCLR
VGTNAQDPEETYLEKADRLHSLMCAVTDKSVFGDGENTKVRVSELEEEVKTLKKINKDLY
DFSSQLLIKPS
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtcgacgcccatggaggtagtggtttctgccgattcaagtggtcagttatggaattgt
gcagtcttcgatcttcattcagggacaaatctgttgtcctatcgaggtggaaacagttcg
tctaggtcgctgaccctccttaatggcgaatacattcttggagcacagctgggaaagaac
ttcatcaacgtatgggaagtgcagaggaaggaccagctccagcagaagatcgtgtgcccc
ggcatcgtcacctgtctcaccacctcacctgacggactctatgtgctggcgggcatcgct
gacgctatttacctgtgggaggtttccacgggcaacctgttggccatcctgaaccgccac
taccaggacctgacctgtctgcgcttcaccgacgacagcagtcacttcatctctggaggc
aaggacaacctggcgctcatctggagcctcgtcagcgtggtgcagctggactcctcccac
acccctgagccccgtcacgtcctgtcacgccactcgctgcccgtcaccgacatccactgc
ggcctcatgggagctcaggctcgcgtcgccaccgcctccctcgaccagaccgtgaagcta
tgggagatctcctcaggcgagctgctgctctcggtgctcttcgacgtcagcatcatgtcc
gtgacccttgacccctgcgagtacttcctgttttgtggcggcagcgatgggaccatctat
caagtgtctctgtgcagcccgagcctgagtcgggataagaccttccagtcagacagcgag
ggaaaccaggtgtttaaaggccacaggaacttggtgacgtgtctctctgtgtccatggac
ggaacactgctgctgtccggctcccatgacgagacggtccgactctgggacgtccagagc
aagcagagcatccgcaccatcaaccacaaaggtccggtgaccaacgcttgcatcatgctc
gcccccgccaacatgttcctgcccgagagtcgcccggccgctcctctgccacgcttcagc
cgccacctcaaccccacggagcagggcgactccaccgccaccgcgggcatgtgtctacgc
gtgggcaccaacgctcaggaccctgaggagacctacctggagaaggcagaccgcctccac
tcccttatgtgtgcagtcacggacaagagtgtgttcggggatggagagaacactaaagtg
cgagtgtcagagctggaggaggaggtgaagacgctgaagaagatcaacaaggacctctac
gacttctccagccagctgctcatcaagcccagctag

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