Sardina pilchardus (sardine): 134102833
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Entry
134102833 CDS
T10667
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04020
Calcium signaling pathway
spil04144
Endocytosis
spil04510
Focal adhesion
spil04540
Gap junction
spil04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134102833 (pdgfra)
04020 Calcium signaling pathway
134102833 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134102833 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134102833 (pdgfra)
04540 Gap junction
134102833 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134102833 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spil01001
]
134102833 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
spil04090
]
134102833 (pdgfra)
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134102833 (pdgfra)
Protein kinases [BR:
spil01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134102833 (pdgfra)
CD molecules [BR:
spil04090
]
Proteins
134102833 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Ig_3
Pkinase
I-set
Ig_2
ig
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Kinase-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
134102833
NCBI-ProteinID:
XP_062413075
LinkDB
All DBs
Position
15:22589118..22618295
Genome browser
AA seq
1475 aa
AA seq
DB search
MGVFETHLTLLAVLISVLPARSDPPTIVSNEDEFVVAQHSRFNISCTGKREVVWADPLPD
NVVDYPGYYTATLLIADAAASHTGYYTCVYASKNGDPGRHEDMDQNESEIYIFVPDPDVP
FAPEENTEVETDPISNIIPCRVTDPQSHVILKSLPSNIEVQGFYDNRNGFLGNFSAGNYV
CETVINDVTKRSVIYTVIEKPVVKQDFQVTLRSSEDAVMAGETFNLTCIAPQGSEYLQQW
LHPVKQAADAVPMKQTLPDRVLYVLSIPSASVHDSGTYECYVTNTLTGHTRSSRVTVAVH
EEKSFVSLDHSGIGGVEVITLLEDTEFTIFIDAHPEPKILWKKDGVPLEKSTFLYAVNSH
VLGNRYQSVLNLKHPTEEDSGKYTFNATSGKHHAHFSFELRVKAPSAVLFPSSQAPVLLP
QSDELVVSPGSSFRLTCRGVAELVWSGPTYLSEQTLDDKGGLFISTVTVESAGVSNTGEY
FCAYRGANQTEEGEGSSIYIYVPDPAVPFVPSMDPSYIHVMTDHEEMEIPCRVSDPTANV
SLVNIETQQELPADYDSKRGFIGIFSAGTYVCKAHVNGQEHLSEEYIVHGWAGGSDLNVE
LLAKRTALLVGETLTVNCVAKGSEMLEDHWKYPGKLYGRGEKTVRENRREMTINYTLRVS
DVTLKDSGIYACSITDIMSNESQTKELTVTVYESPFVSLVPGFTRTELAELDEVREFTAD
IDAFPGVNVVWHKDGVPLGGNSAEMTTSLRTISETKYQSVLTLIRAKAEDSGNYTVRAET
RNQSSSFSFSLQVKVPAFIVEMMDLHHGSTTGQSVVCIAGGEPMPDVDWFICKNIKHCAN
DSTQWSPLPANSTEITVDTHVNQDMQLETQVIFGHLEDTLAVRCLAKNGMAAVTREVKLV
SSGPHSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDP
MQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE
KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSHH
PEKGKKELDIFGINPADETSRSYVILSFEGKGDYMDMKQADTTQYVPMLEMNQASKYSHL
QGSDYDHPPSQKNEGEGESLLSDDSNEGLTTMDLLSFTYQVARGMEFLASKNCVHRDLAA
RNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSY
GILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHASDDVYEMMSRCWNSEPEKRP
SFLSLSETVASLLPAGYKRSYERMNHDFLKSDHPAVTRVQRLGGSVIGIDDDDNYIGVTY
KNQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPMSDEEYGKRNRHSSQTSDESAIETGSS
SSTLAKRMEGETLEDITLLDEMCLDSSDLVEDSFL
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgggggttttcgagacccatctcactcttttggctgtgttaatcagtgtattaccagcc
cggagtgatccgccgaccatagtttccaacgaagacgagtttgttgtcgctcagcactca
cgtttcaacatcagctgtacagggaagagggaggtcgtatgggccgatcccctgcccgac
aacgttgtcgattatcccggttactacactgcaacactgctgattgcagacgctgcagct
tcccatactggatactacacatgtgtttacgcatccaaaaatggcgaccctggaagacac
gaggacatggaccagaacgagtctgaaatatacatatttgtgccagatcccgatgttccc
ttcgcacctgaggagaatactgaagtggagactgacccaattagcaatatcattccttgt
cgcgtcaccgacccccagtcccatgtcattctcaaatccttgccaagtaacatcgaagtg
cagggcttctatgacaacaggaatggctttcttggcaacttttctgctggaaattacgta
tgtgagaccgttatcaacgacgtgacgaagagaagcgtaatctacactgtgattgaaaag
cctgtggtgaagcaggacttccaggtgacactgaggtccagcgaggacgctgtgatggct
ggggagacattcaacctcacctgcatcgctccgcaagggtctgaatacctgcagcagtgg
ctccatcccgtaaaacaggctgcggatgcggtcccgatgaagcagactctccctgacagg
gtgctgtacgtcctcagcatcccctcggcctccgtccacgacagcggcacctacgagtgc
tacgtcaccaacacgctcaccggacacacccggagcagccgagtgaccgtggccgtccac
gaggaaaagtcgtttgtgtcgctggaccacagtggcatcggtggcgtggaggtcatcact
ctgctggaggacacggagttcaccatctttatcgatgcccacccagagcccaagatcctg
tggaagaaagatggcgtccctctggagaagagcacttttctctacgccgtcaacagccac
gtcctcggaaaccggtatcagagcgttttaaatctcaaacacccaaccgaggaggacagt
gggaagtacacgttcaacgccaccagtggcaaacaccacgcacacttctcttttgagctg
cgagtcaaggctcccagcgccgtgctgttcccgtcgtcccaggcgccggtgctgctgccc
cagagtgacgagctggtggtgtccccgggctcctccttcagactcacctgtcggggcgtg
gccgagctggtgtggagcggccccacctacctgtccgagcagacgctggacgacaagggc
ggcctgttcatcagcacggtgaccgtggagagcgccggggtgagcaacaccggcgaatac
ttctgcgcctatcgaggagccaatcagacggaggagggcgaggggagcagcatctatatc
tacgtgccagatccagcggtgccgttcgtcccctccatggacccgtcgtacatccacgtg
atgacggaccacgaggagatggagatcccgtgccgcgtgtccgaccccaccgccaacgtg
tccctggtcaacatcgagacgcagcaggagctgcccgccgactacgacagcaagcgaggc
ttcatcggcatcttcagcgccggcacctacgtctgcaaggcacacgtcaacggccaggag
cacctcagcgaggagtacatcgtccacggatgggcaggaggctctgatctgaatgtggag
cttcttgctaagagaactgctctcctggtgggagagacgctcacggtcaactgtgtggcc
aaaggcagcgagatgctggaagaccactggaagtaccctggcaaactgtacggtcgcggc
gagaagacggtgagggagaacagacgagagatgaccatcaactacaccctgcgggtgtcc
gacgtgacgctgaaggacagcggcatctacgcctgttccatcaccgacatcatgagcaac
gagagccaaaccaaggagctgaccgtcaccgtctatgagagtccctttgtgtcgctggtc
cccggcttcactcgcaccgagctggccgagctggacgaggtgcgggagttcacggccgac
atcgacgccttccccggcgtcaacgtcgtctggcacaaagatggcgttccgctgggcggc
aactccgcggagatgaccacaagcctccgcacgatcagcgagacgaaataccagagcgtt
ctgaccctgatccgcgcgaaggccgaggacagcggcaactacacggtcagggctgagacc
cggaaccagagcagcagcttcagcttctccctgcaggtcaaagtccctgcgttcatcgtg
gagatgatggacctccaccacggctccaccacgggtcagtcggtggtgtgcatcgccggg
ggggagcccatgccagatgtggattggttcatctgtaagaacatcaaacactgtgccaat
gactccacccagtggagcccgctacccgccaactccactgagatcaccgtggacacgcac
gtcaaccaggacatgcagctggagacccaggtgatcttcggtcatctggaggacacgctg
gccgtccggtgcctggccaagaacggcatggccgccgtcacccgggaggtcaagctggtg
tccagcggtcctcactcggagctgaccgtggcagctgctgtgctggtgttgctggtcatt
gtcatcatctcactcattgtgctggtcattatctggaaacagaagccacgctatgagatt
cggtggcgggtgattgagtcggtcagtccggacggtcacgagtacatctacgtggacccc
atgcagcttccctatgactcacgctgggagttccctcgtgacggcttggtgctgggtcgt
attctgggctcgggggcctttgggaaggtggtggagggcactgcctacggtctgagccgc
tcccagcccgtcatgaaggtggccgtgaagatgctgaaaccgacggctcgttccagtgag
aagcaggcgctcatgtctgagctgaagatcatgactcacctgggcccgcacctcaacatt
gtcaacctgctcggagcctgcaccaagtcagggcccatctacatcatcactgagtactgt
ttctatggcgacctggtcaactacctgcacaagaaccgtgacagcttcctgagtcaccac
ccagagaagggcaagaaggagctggacatcttcggcatcaaccccgccgacgagaccagc
agaagctatgtgatcctgtcgttcgagggcaaaggggactacatggacatgaagcaggca
gacaccacccagtacgtgccaatgctggagatgaaccaggcctccaagtactcacacctg
cagggctctgactacgaccacccgccctctcagaaaaatgaaggtgagggagagagtctg
ctctccgatgacagcaacgagggcctcaccaccatggacctgctcagcttcacctaccag
gtggcccggggcatggagttcctggcctccaagaactgtgtgcatcgggatttggccgcc
aggaatgtcctgctctctcaaggaaagatagtcaagatctgcgactttggcctggccaga
gacatcatgcatgacaacaactatgtctccaaaggaagcacattcctgcctgtcaagtgg
atggctccagagagcatctttgacaacctgtacacaaccctcagtgacgtctggtcctat
ggcatcctgctgtgggagatcttctctctcggagggactccgtaccctggcatggtggtc
gactcgagcttctacaacaagatcaagagtggctacagaatggccaaacctgagcatgcc
tctgatgatgtctatgagatgatgtcgaggtgctggaacagtgagccagagaagagacct
tccttcctgagcctgagcgagactgtggcatcgctactgcctgcaggatacaagaggagc
tacgagcgaatgaaccacgacttcctgaagagcgatcacccggccgtgacccgcgtgcag
cgcctgggcggcagtgtcatcggcatcgacgacgacgacaactacatcggggtcacctac
aagaaccagggcaagctgaaggaccgcgagagcggcttcgacgagcagcgcctcagctcg
gacagcggctacatcatccccctgcccgacctggacccgatgtccgacgaggagtacggc
aagaggaaccgccacagctcacagacgtcggatgagagtgccatcgagaccggctccagc
agctccaccctggccaagcggatggagggagagaccctggaggacatcaccctgctggac
gagatgtgcctagactccagcgacctggtggaggacagcttcctgtga
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