Skermania piniformis: KV203_01865
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Entry
KV203_01865 CDS
T07358
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spin
Skermania piniformis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spin03032
]
KV203_01865 (topA)
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_01865 (topA)
Enzymes [BR:
spin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV203_01865 (topA)
DNA replication proteins [BR:
spin03032
]
Prokaryotic type
DNA Topoisomerases
KV203_01865 (topA)
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV203_01865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
QXQ14209
LinkDB
All DBs
Position
415873..418788
Genome browser
AA seq
971 aa
AA seq
DB search
MPADRLLSSCCSGRGASGKAYLDVATRDNKAANSSSPDGSPHRLVIVESPTKARKIAPYL
GRGYTVEASVGHIRDLPRGAADVPAKYKGEPWARLGVDVDHDFQPLYVVSPDKKAKVTEL
KGLLRDADELYLATDPDREGEAIAWHLLETLKPKVPVRRMVFHEITEPAIRAAAADTREL
DNDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRVIVQRERERMAFRSA
EYWDIAAKLDAGATASPRNFSARLVSVNGERVATGRDFGPDGQLKSSTVTVIDEQYANRL
AEALRGADLVVASAESKPYSRKPYAPFMTSTLQQEAGRKLRFSSERTMRIAQRLYENGYI
TYMRTDSTTLSATAIEAARRQATELYGAEYVSSAPRQYTRKVKNAQEAHEAIRPAGDVFA
TPGELHSRLDGDEFRLYEMIWQRTVASQMADARGSTLTLRIEGTAGTGELCTLSASGRTI
TFPGFLKAYVESVDEEAGGQSDDAESRLPQLAEGAPVTAIELSADGHTTNPPARYTEASL
VKALEEMGIGRPSTYASIIKTILDRGYVYKRGSALVPSWVAFAVVGLLEAHFGRLVDYDF
TAEMEDDLDEIAGGRQHRDTWLSDFYFGGDRGEQDSVARSGGLKRMVGERLEDIDAREVN
SIRLFVDDGGRDVNVRVGRFGPYLERMVENPDDPGGDPVSQRANLPDDLPPDELTPALAE
QLFATPQEGRQLGVDPATGHEIVAKEGRFGPYVTEILPDPPASDGDAPKKGAKKAAAPKP
RTGSLLKSMEIATVTLDDALKLLSLPRVVGADPADGAEITAQNGRYGPYLKKGTDSRSLA
TEDQIFTVTLDEALKIYAEPKRRGRQAAATPPLRELGADPVSGKPMVIKDGRFGPYVTDG
ETNASLRKGDEVEAISDERAAELLADRRARGPVKRKAPAKKAPAKKAATKTAAVKKAATK
TAAAKKAPAKK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggaccggctgctgtcgtcctgctgcagtggtcggggggcgagtggaaaggca
tatttagacgtggcaacgcgagacaacaaagcagcgaattcgtcctcgccggacgggtca
ccgcaccgccttgtcatcgtcgagtcgccgacgaaggcccgcaagatcgcaccgtatctc
ggtcgcggttacaccgtcgaggcgtcggtcgggcatatccgcgaccttccgcgcggcgct
gccgacgttccggccaagtacaagggtgagccgtgggcgcggctcggcgtcgacgtcgat
catgacttccagccgctctatgtggtcagcccggacaagaaggccaaggtcaccgaactg
aagggcctactccgcgacgccgacgagctgtacctggccaccgaccccgaccgcgaaggc
gaggcgatcgcctggcatctgctggagacgctgaaacccaaggtgccggtccggcggatg
gtgttccacgagatcaccgagccggccatccgcgccgccgccgccgatacccgtgagctg
gacaacgacctggtcgacgcgcaggagacccggcgcatcctggaccggctctacggttac
gaggtcagcccggtgttgtggaagaaagtgatgcccaggctgtccgcgggacgcgtgcag
tcggtggctacccgggtgatcgtgcagcgggaacgggagcggatggcgttccgctcggcg
gagtactgggatatcgcagccaagctggatgccggtgcgacggccagcccgcgcaacttc
agcgctcggctggtgagtgtgaacggcgagcgggtggccaccggccgggacttcgggccg
gacgggcagctgaaatcgtcgaccgtgacggtgatcgacgaacagtatgcgaaccggctt
gccgaggccctgcgcggcgccgatctggtagtcgcctccgccgagtccaagccgtacagc
cgtaagccgtacgcgccgttcatgacctcgacgctgcagcaggaagccggccgaaaactg
cggttctcctcggagcggaccatgcgcatcgcccagcggctgtacgaaaacggctacatc
acctacatgcgtaccgattcgacgacgctgtccgcgacggcgatcgaagcggcgcgtcgc
caggcgaccgagctctacggcgccgaatacgtcagctccgcgccccggcagtacacccgc
aaggtgaaaaacgcccaggaggcgcacgaggcgatccgtcccgccggcgacgtgttcgcc
accccgggggagttgcacagccggctggacggcgacgagttccggctctacgagatgatc
tggcaacgtaccgtcgcctcccagatggccgacgcccgcggttccacgttgacgctgcgg
atcgagggcacggcggggaccggggaactctgcacgctgtcggcgtccggccggacgatc
accttcccaggcttcctgaaggcctacgtggagagcgtcgacgaggaggccggtggccag
agcgacgacgcagaatcccgattgccgcagctggccgagggcgcgccggttaccgcgatc
gagctgtccgccgacgggcacacgaccaatccgccggcccgatacaccgaggcgtcgttg
gtcaaggcgctggaagagatgggtatcgggcgcccgtccacctatgcgtcgatcatcaag
accatcctggaccgcggctacgtctacaagcggggtagcgcgctggtgccgtcctgggtg
gcgttcgccgtcgtcgggctgctcgaagcgcatttcggtcgcttggtcgactacgacttc
acggccgagatggaggacgacctcgacgagatcgccggcggccggcagcaccgggacacg
tggttgtccgacttctacttcggtggtgaccggggcgaacaggactcggtagcccggtcc
ggcggcctcaagcggatggtcggtgagcggctggaagacatcgatgcgcgggaagtgaac
tcgatccggctgttcgtcgacgacggtggccgggacgtgaacgtgcgcgtcggtcgtttc
gggccgtacctggagcgaatggtcgagaacccggacgacccgggcggtgacccggtctcg
cagcgggccaacctgccggacgaccttccgccggacgaactgaccccggcgctcgccgag
cagctgttcgccaccccgcaggaaggccggcagctcggtgtggacccggccaccggacac
gagatcgtcgcgaaggaaggccggttcgggccttacgtcaccgagatcttgccggatccg
ccggcatcggacggcgacgcgccgaagaagggcgcgaagaaggcggccgcaccgaagccg
cggaccgggtcgctgctgaaatcgatggagatcgcgaccgtcaccctggacgacgcgctc
aagctgctgtccttgccccgggtggtcggcgcggacccggccgacggcgcggagatcact
gcgcagaacggccggtacgggccgtacctgaagaagggcacggattcacggtcgctggcg
accgaagaccagatcttcaccgtcaccctcgacgaggcgttgaagatctacgccgagccg
aagcgccgcggccggcaggcggccgcaacgccaccgctgcgcgagctgggtgccgacccg
gtatccggcaagccgatggtgatcaaggacggtcgattcggtccgtacgtcaccgacggc
gagaccaacgccagcctgcgcaaaggcgacgaggtcgaggcgatctccgacgagcgcgcc
gcggagttgctcgccgaccggcgggcgcgcgggccggtgaagcgcaaggccccggcgaag
aaggcccccgcgaagaaggcggccaccaaaacggcagcggtcaagaaggcagctaccaag
actgcggcggccaagaaggctccggccaagaagtag
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