Skermania pinensis: KV203_04970
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Entry
KV203_04970 CDS
T07358
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spin
Skermania pinensis
Pathway
spin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV203_04970 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spin03021
]
KV203_04970 (rho)
03019 Messenger RNA biogenesis [BR:
spin03019
]
KV203_04970 (rho)
Transcription machinery [BR:
spin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KV203_04970 (rho)
Messenger RNA biogenesis [BR:
spin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KV203_04970 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXQ15684
UniProt:
A0ABX8SCT0
LinkDB
All DBs
Position
1091730..1093637
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AA seq
635 aa
AA seq
DB search
MLLPQLRVIATELGIRGTSGMRKGALITAITQNRAGTKAPAAPAAEPAPAVESAPEPASE
AVPVSDAESKAAPAPESKAAPAPESNVSAAPADQLALDEAPPRTERAPRRAERDGGSARQ
ARRSAETPAGAESAESADNEPATDGQAGGRRRERNQNSAANQAGAAGPAGGQGNNATSGN
GGGNRNSNRNNAERGNNAERGNSAERGNNAERNSDDDDEGGRGRRGRRFRERRRGRDRGG
ELVGSTAEPEIRDDDVLQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNLVRKNGLRRG
DAITGAVRAPREKEQGNQRQKFDPLVRLDTVNGGDVEAAKRRPDFGKLTPLYPNQRLRLE
TTQNKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAIATNNPECYLMVVLVDE
RPEEVTDMQRSVRGEVIASTFDRPPSDHTSVAELAIERAKRLVEMGKDVVVLLDSITRLG
RAYNNSSPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIIATAMVETGSTGDTVI
FEEFKGTGNAELKLDRKISERRVFPAVDVNPSSTRHDELLMSPDEMAVVHKLRRVLAGLD
SHQAIDLLIDRLKKSRNNIEFLMQVSKNAPGGADD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgcaactccgtgtcatcgcgaccgaactgggcatccggggcacgtcgggt
atgcgcaagggcgcgctgatcaccgcgatcacgcagaaccgtgcgggtaccaaggctccc
gccgcaccagcagcggagcctgcgcccgcggtcgagtccgcgccggagcctgcgtcggag
gcggtgccggtatccgacgcggagtcgaaggcggcgcctgcgccggagtcgaaggcggcg
cctgcgccggagtcgaacgtttcggccgccccggccgaccagcttgcgctcgacgaggcc
ccgccccggacggagcgggcacctcggcgagccgaacgggatggcggcagcgctcggcag
gcgcgccgctcggccgagaccccggcaggcgccgagtcggcggagtcggcggacaacgaa
ccagcgaccgacggccaggccggcgggcggcggcgcgagcgcaaccagaacagcgcagct
aatcaagctggggccgccggtccggccggtggtcagggcaacaacgcgacctccggtaac
gggggcgggaaccggaacagcaaccgcaacaacgccgagcgcgggaacaatgccgagcgc
ggcaatagtgccgagcgcgggaacaatgccgagcgcaactccgacgacgacgacgaaggg
gggcggggccggcggggccgtcggttccgcgagcgtcggcgcgggcgtgaccgcggtgga
gagctggtcggatccaccgcagagccggagatccgcgacgacgacgttctgcagccggtg
gccggaattctcgatgtgctggacaattacgcgttcgttcgtacgtcgggctatctggcc
gggccgaacgatgtctatgtctcgatgaacctggtccgcaagaacgggttgcgtcgtggc
gatgcgatcaccggcgcggtccgggcgccgcgggagaaggaacagggcaaccagcggcag
aagttcgatccgctggtccggctcgacacggtgaacggtggtgacgtcgaggccgccaag
cgacgccccgatttcggcaagctcaccccgctctacccgaaccagcggctgcgtctggag
accacgcagaacaagctgaccactcgggtgatcgacctgatcatgccgatcggcaagggc
cagcgggcgctgatcgtttcaccgccgaaggcgggtaagacgacgatcctgcaggacatc
gcgaacgcgatcgccacgaacaacccggagtgctacctgatggtggtgctggtggacgaa
cgtcccgaagaggtcaccgacatgcagcgctccgtgcgcggtgaagtgatcgcctccacc
ttcgaccgaccgccgtccgatcacacctcggttgccgagttggcgatcgagcgggccaag
cgactggtcgagatgggcaaggacgtggtggttctgctggactcgatcacccggctgggt
cgggcatacaacaattcgtcgccggcgtccggacggattttgtccggtggtgtcgactcg
accgcgctgtatccgcccaaacggttcctcggcgccgctcgcaacatcgagaacggtggc
tcgctgaccatcatcgccaccgcgatggtggagaccgggtccaccggcgacaccgtgatc
ttcgaagagttcaaggggaccggcaacgccgagctcaagctcgatcgcaagatctccgaa
cggcgggtgttcccggcggtggatgtcaatccgtccagcacccggcacgacgaactgctc
atgtcgccggatgagatggcggtggtgcacaaactgcgccgggtgctcgccggactggat
tcgcatcaggcgatcgatttgttgatcgaccggctgaagaagagtcgcaacaacatcgag
ttcttgatgcaggtatcgaagaacgcacccggcggcgccgacgactga
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