Skermania pinensis: KV203_05960
Help
Entry
KV203_05960 CDS
T07358
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spin
Skermania pinensis
Pathway
spin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV203_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spin03019
]
KV203_05960
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_05960
Enzymes [BR:
spin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV203_05960
Messenger RNA biogenesis [BR:
spin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KV203_05960
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KV203_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
AAA_22
KORA
HEM4
Motif
Other DBs
NCBI-ProteinID:
QXQ14918
LinkDB
All DBs
Position
complement(1286519..1288627)
Genome browser
AA seq
702 aa
AA seq
DB search
MGRVTALPHPADELRGAADALLRDLAGPDAVLRPDQWTAIEALVRHRRRALVVQRTGWGK
SAVYFIAAKLLRNAGGGPAVIISPLLALMRNQVAAAERAGVVAATINSGNMTEWDEIHEQ
VRAGTVDVLLVSPERLNNPDFRDQVLPALAADAGLVVIDEAHCISDWGHDFRPDYRRIRT
LIADLGDDVPVLATTATANDRVVSDVAAQIGVNNETLMLRGSLDRESLHLDVVRIDDAVV
RATWLATHLAELPGSGIIYTLTVSAAQDLAELLAAHGHRVAAYTGQTDSAERAALEQALL
ADEVKALVATSALGMGFDKPNLGFVVHLGAPSSPIAYYQQVGRAGRATDRAEVILLPGPE
DQRIWSWFASVAFPREHLVRSVIAALDTERPRSTAALEPAVELNRTRLETVLKVLDVDGA
VRRVRGGWLSTGRDWTYDADRYRRLDDARGREQQAMLDYQNTTGCRMVFLRSQLDDPALD
RNYRCGRCDNCAGRRRPVDVDTADLTATRARLARPGVPLPPRKLWPTGMDRLGVALAGRI
TTGPEAGRALGRLADLGWGPRLRALLDGPDLTAPEPVVRGCVAVLRDWDWAQRPTAVLTL
ESATHPQLMQSLAAHLAELGRLTDLGTLPRRPGHPPVSAANSAYRVAGLVGSWDLPDLSE
HTGPLLLLTDRTDTGWTYTVAAHELRTVGVDAVLPFALTIPK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggtgaccgccctcccccaccccgccgacgaactgcgcggcgccgccgacgcc
ctgctgcgcgacctggctggcccggacgcggtgctgcgccccgaccagtggaccgcgatc
gaagcgctggtccggcatcggcgccgcgctctggtggtgcagcgcaccggctggggcaag
tccgcggtctacttcatcgcggccaagctgctgcgcaacgccggcggcggaccggcggtc
atcatctcgccgctgctcgccctgatgcgtaaccaggtcgcggcggccgagcgagcgggc
gtcgtagcggcaacgatcaactccggtaacatgaccgagtgggacgagatccacgagcag
gtccgcgccggaacggtcgacgtgttgctggtcagtccggaacggctgaacaatcccgat
ttccgggatcaagtcctccctgcgttagccgccgacgccggcctggtggtgatcgacgaa
gctcactgtatttccgactgggggcacgacttccggccggactaccgacggatccgcacg
ctgatcgccgacctgggtgacgacgtgccggttctggctaccacggcgaccgcgaacgat
cgggtcgtctccgatgtggcggcccagatcggagtgaacaacgaaacgctgatgctgcgc
ggctcgctggaccgggagtcgctgcacctcgacgtcgtccggatcgacgacgccgtggtg
cgggcgacctggctcgcgacgcatctcgccgaacttcccggctccggaatcatctacacg
ctcaccgtatccgcggcccaggatctcgccgaactgttagccgcacacggtcatcgggtc
gccgcctacaccgggcagaccgacagcgccgaacgtgcggcgttggagcaggctctgctc
gccgacgaggtcaaagcgctggtggcgacctcggcattgggcatggggttcgacaagccg
aacctcggcttcgtcgtacacctcggcgcaccatcctcgccgatcgcctactaccagcag
gtcggccgcgccggccgggccaccgaccgagccgaggtgatcttgctgcccgggccggag
gaccagcgcatctggagttggttcgcgtcggtggcgttcccccgagaacacctggtgcgc
agtgttatcgcagcgctggataccgaacgtccgcgctccaccgcggcactcgagccggcc
gtcgagctgaaccggacccgattggagacggtgctcaaggtgctcgatgtcgacggcgcg
gtgcgtcgggtgcgcggcggctggctgtcgaccgggcgagactggacctacgacgccgac
cggtaccgccggctggacgacgcgcgggggcgcgaacagcaggcgatgctggactaccag
aacacgaccggttgccggatggtgttcctgcgcagccaactcgacgatccggcgctggac
cggaactatcggtgtggccgctgcgacaactgcgccggccggcgccgcccggtagatgtc
gacaccgccgatctcaccgccacccgcgcccgcctggcgcgaccaggcgtcccactcccg
ccccgcaagctctggccgaccggaatggaccgcctcggcgtggcgctggcaggccggatc
accaccggtcccgaagccggccgcgcgctcggccggctggcagatctcggctggggcccg
cgtctgcgtgcgctgctcgacggtccggatctcacagcgccggaaccggtggtgcgggga
tgcgtcgcggtactgcgggattgggactgggcgcagcgaccgaccgcggtgctcacgctg
gagtcggcgacccacccacagctgatgcagagcctggccgcgcaccttgccgaactcggt
cggctgaccgacctgggcacgctgccccgccgccccggccatcctccggtgtcggctgcc
aactcggcctaccgggtggccggcctggtcggcagctgggacctgccggacctgagcgag
cacaccggcccgctcctgctgctcaccgaccgtaccgataccggctggacctacaccgtt
gccgcgcacgaattgcgcaccgtcggtgtggacgccgtgctcccgtttgcgctgacgata
cccaaatag
DBGET
integrated database retrieval system
