Skermania piniformis: KV203_06850
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Entry
KV203_06850 CDS
T07358
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spin
Skermania piniformis
Pathway
spin03030
DNA replication
spin03430
Mismatch repair
spin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KV203_06850
03430 Mismatch repair
KV203_06850
03440 Homologous recombination
KV203_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spin03032
]
KV203_06850
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_06850
Enzymes [BR:
spin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KV203_06850
DNA replication proteins [BR:
spin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KV203_06850
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KV203_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QXQ15065
LinkDB
All DBs
Position
1474286..1476082
Genome browser
AA seq
598 aa
AA seq
DB search
MDLPTSCTPPSCTPPRLPVRAGYLSVPPDSFDHVPTDRQLSFDELDQSLFDTTFVVVDLE
TTGGSAADDAITEIGAVKVRGGVVLGELHTLVDPGRSIPPAITELTGITTAMTYDAPPIE
RVLPSFLEFAAGAVLVAHNAGFDIGFLRAAATRCATAWPRFRVLCTVKLARRVLSREEAP
SVRLGALATLLQAGTAPSHRALDDARATVDVLHALIARVGNQGVHSYAELVAYLPGVPAG
HRAKRTLAAGLPRRPGVYLFRGPGGEVLYVGTATDLQRRVRSYFTGSETRSRMREMVALA
ERVDHVECAHPLEAGVRELRLLRAHAPPYNRRSRFPKRAWWLTLTDEPFARCMLSRTPAP
AALGPFGSRGDAAAVADTLARMCRLRTCTGRIGRRGRHACRVEPVGGCAAGGLAEPGEYQ
PGPARLRALLAGESDAVLAELHDEVAGLAAAGQFEAAARARDRAVALITALHRCQRLAGL
AAVAELVGAHPGPGGGWELAVIRYGRLAAAGVARPGVPPMPVVEQLAAAAETVVPDGSTL
HGALPDETGLLVRWLTRPGTRIVRTSDGYAEPVYGAARWAGWAARARAAADGERARSP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacctcccgacatcgtgcacaccgccatcgtgcacaccgccgcggctgcccgtgcgg
gccggatatctgtcggtgccgccggatagcttcgaccatgtgcccaccgaccggcaattg
agcttcgacgaactggaccaatccctgttcgacaccaccttcgtggtggtcgatctggag
accaccggcggcagcgcagccgacgatgcgatcaccgagatcggcgcggtgaaggtgcgg
ggtggcgtggtgctcggcgagttgcacaccttggtcgaccccgggcgatcgatcccgccg
gcgatcaccgagctgaccgggatcaccaccgcgatgacctacgatgcgccgccgatcgag
cgggtgctgcccagctttctggagtttgccgccggcgctgtcctggtcgcccacaacgcc
ggcttcgacatcgggttcctgcgcgccgcggcaactcgctgcgcgacggcgtggccgaga
ttccgtgtgctgtgcacggtcaagctggctcggcgggtgctcagtcgggaggaggcgccg
tcggtccggctcggcgcgctggcgacgttgttgcaggccggcaccgcccccagccatcgc
gcgctggacgatgcgcgagcgaccgtggacgtcctgcatgccctgatcgcccgggtcggc
aaccaaggggtgcacagctacgccgagctggtggcctatctgccgggcgtgccggccggg
caccgcgccaagcgcacgctcgcggccggcctgccccgccggccgggggtgtatctgttc
cgtggcccgggcggcgaggtgctctacgtcgggacggcgaccgacctgcaacgccgggtc
cgtagctatttcaccggatcggaaacccggagccggatgcgtgagatggtcgcgctggcc
gagcgggtcgaccacgtcgaatgtgcccacccgttggaggccggagtgcgggagctgcga
ctgctccgggcgcacgcgccgccgtacaaccggcgctcgcgattcccgaagcgggcctgg
tggctgacgctgaccgacgagccgttcgctcgctgcatgctgagccgaaccccggcgccg
gccgcattgggtccgttcggttcgcggggcgacgccgccgcggtcgccgacacgttggcc
cggatgtgccggctccgcacctgcaccggccggatcggccgccgcgggcggcacgcctgc
agggtcgaaccggtcggcggttgcgcggccggtgggctcgccgagccgggggagtaccag
cccggtccggcccggctgcgcgcactgctcgccggggagtccgatgcggtgcttgccgag
ttgcacgacgaggtggccggattggcggccgccgggcagttcgaggccgccgcccgggcc
cgagaccgggcggtcgcgttgatcactgcgttacaccgatgccaacgcctcgccgggctg
gctgcggtggccgagctcgtcggtgcgcacccgggcccgggtggcgggtgggaactcgcc
gtgatccgctacggccggctggcggcggccggcgtcgcccgtccgggagtgccgccgatg
ccggtggtcgagcagctggcggcggccgccgaaacggtggtgccggacggttcgaccctg
catggtgcgctgccggacgaaaccgggctgttggtgcgctggctcactcggccgggtacc
cggatagtccggaccagtgacggctacgccgagccggtgtacggcgccgcccgttgggcc
gggtgggctgcccgggcccgcgccgccgccgacggcgaacgtgctcggtcgccgtga
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