Skermania pinensis: KV203_07170
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Entry
KV203_07170 CDS
T07358
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spin
Skermania pinensis
Pathway
spin03030
DNA replication
spin03430
Mismatch repair
spin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KV203_07170 (dnaE)
03430 Mismatch repair
KV203_07170 (dnaE)
03440 Homologous recombination
KV203_07170 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spin03032
]
KV203_07170 (dnaE)
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_07170 (dnaE)
Enzymes [BR:
spin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KV203_07170 (dnaE)
DNA replication proteins [BR:
spin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KV203_07170 (dnaE)
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KV203_07170 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QXQ15118
LinkDB
All DBs
Position
1547919..1551455
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKISPLFAEAKRLGMDAVGMTDHGNMYGAAEFYTSAVAAG
ITPIIGIEAYIAPGSRFDTKRVQWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWARMDEQIIAEHAAGIIATTGCPSGEVQTRLRLGHDRAALEAAAKWQEI
FGPENFFLEVMDHGLSIERRVREGLLEIGRTLGIPPLATNDCHYVTKDQSGNHEALLCIQ
TGKTLSDPGRFKFDGDGYYLKSAEEMRAIWDAEVPGACDSTLLIAERVQPYADVWQFRDR
MPVFPVPAGEDQDSWLRKDVERGLARRFPGGVPEEYHARARYELDVIKQKGYPAYFLVVG
DLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIRYGLLFERFLNPERPSAPDIDID
FDDRRRGEMVRYATEKWGTDKVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKAL
PPPIMAKDISVSGITDPNHDRYKEAAEVRTLIETNPDVAKIYETAKGLEGLIRNAGVHAC
AVIMSSEPLIDAIPIWRRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIMGDAIDNVK
ANRGADIDLDHLPLDDPATYELLSRGDTLGVFQLEGGPMRDLLRRMQPTGFDDVIAVIAL
YRPGPMGMNAHNDYADRKNGRQEITPIHPELAEPLADILGDTYGLIVYQEQIMFIAQKVA
GYTMGQADALRKAMGKKKLEVLEKEYETFHAGMTANGFSAAAIKSLWDAILPFAGYAFNK
SHAAGYGLVSYWTAYLKANYTAEYMAGLLTSVGDDKDKAAAYLADCRRLAISVLPPDVNS
SEHNFASVGKDIRFGLGAVRNVGSNVVAAIIAGRREHGAFTDFSDYLNKIDALACTKKVA
ESLIKAGAFDSLGHSRKGLLLVHSDAIDAVMSTKKAEAMGQFDLFGGADADADVTSVFNV
KVPDDEWDSKHKLALEREMLGLYVSGHPLNGVEHILAAQADTQIPAILAGDVPDGTQVTV
GGILAAVNRRINKNGLAWASAQIEDLTGGIEVLFFPQAYSVFGMDVTEDAVVLVKARVSV
RDDRISLIANDLAVPDLSQVGVAKPLAVSIQSRMCTPDKVGALKRVLASHPGTADVHLRL
VSGEKTTMLELDRSLRVTPSSALMGDLKALLGPSCLAS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattcgttcgtccatctgcacaaccacaccgagtattcgatgctcgacggtgca
gcgaagatctcaccgctgttcgccgaggcgaaacggctcggaatggacgcggtcgggatg
accgaccacggcaacatgtacggcgcggccgagttctacacctccgcggtcgccgccggc
atcacaccgatcatcgggatcgaggcctacatcgcgcccggttcccggttcgacaccaag
cgcgtgcagtggggcgatcccggccagaagggcgacgacgtctccggttccggcgcctac
acccacatgacgatggtcgcggaaaatgcgaccggcctacgcaatctgttcaagctctcg
tccctggcgtcgatcgagggccagctcggcaagtgggctcggatggacgagcagatcatc
gccgagcacgccgccggcatcatcgcgaccaccggctgcccgtccggtgaggtgcagacc
cggctgcggttggggcacgaccgcgcagcactggaagctgccgcgaagtggcaggagatc
ttcggtccggaaaacttcttcctggaggtgatggaccacggcctgagcatcgagcggcgg
gtacgggagggcttgctggagatcggtcgcacgctcggcatcccgccgctggccaccaac
gactgccactacgtcaccaaggatcagtcgggcaatcacgaggcgctgctgtgtatccag
accggtaagacgctgtcggacccgggccggttcaaattcgacggcgacggctattacctc
aagtccgccgaggagatgcgcgcgatctgggacgccgaggtaccgggggcctgcgattcg
acattgctgatcgccgagcgggtccagccgtacgccgatgtgtggcagttccgggatcgg
atgccggtcttcccggtcccggccggcgaggaccaggactcgtggctgcgcaaggatgtc
gagcgcggtctggcccggcgtttcccgggcggcgtgccggaggagtaccacgcccgcgcc
cggtacgagctggacgtgatcaagcagaagggctacccggcgtacttcctggtggtcggc
gacctcgtgtcgcatgccaaggaggtcggcatccgggtcggcccgggccgcggctcggcg
gccggctcgttggtcgcctacgcgctgggcatcaccaacatcgacccgatccggtacggc
ctgctgttcgaacggttcctcaatccggaacggccgtcggcgcccgacatcgatatcgat
ttcgacgaccgccgacgcggcgagatggtccggtacgccaccgagaaatggggtaccgac
aaggtcgctcaggtcatcacgttcggcacgatcaagaccaaggcggcgatcaaggactcg
gcgcgagtgcagttcggccagcccggattcgccatcgccgaccagatcaccaaggcgctg
cccccgccgatcatggccaaggacatctcggtgtccgggatcaccgacccgaaccacgac
cggtacaaggaagccgccgaggtccgtaccctgatcgaaaccaaccccgatgtcgccaag
atctacgagacggcgaagggtttggagggtctgatccgcaacgcgggggtgcacgcctgt
gcggtgatcatgtcgtcggagccgttgatcgatgcgatcccgatctggcggcggccgcag
gacggtgcgatcatcaccggctgggactacccgtcctgcgaggccatcggcctgctgaag
atggacttcctcgggctgcgcaacctgaccatcatgggtgacgcgatcgacaacgtgaag
gccaaccggggcgccgacatcgatctggaccacctgccgctcgacgacccggcgacctac
gagctgctctcgcgcggcgacacactcggggtgttccagctcgagggcggcccgatgcgg
gacctgctgcggcggatgcagccgaccggtttcgacgacgtgatcgcggtgatcgcgctc
tatcgtcccggtccgatggggatgaacgcgcacaacgactacgccgaccggaagaacggt
cggcaggagatcaccccgatccacccggagctggccgaaccactggccgacatcctcggc
gacacctacgggctgatcgtctaccaagagcagatcatgttcatcgcgcagaaggtggcc
ggctacacgatgggccaggccgacgcgctgcgtaaggcgatgggcaagaagaagctggag
gtgttggagaaggagtacgagaccttccatgccgggatgaccgcgaacggtttctccgcc
gccgcgatcaagtcgctgtgggacgcgatcctgcccttcgccggctacgctttcaacaag
tcgcatgccgccggttacgggctggtctcctactggaccgcttatctgaaggcgaactac
accgccgagtacatggccggcctgctcaccagcgtcggtgacgacaaggacaaggcggcc
gcctacctggccgactgccgtcgcctggcgatctcggtgctgccgccggacgtcaactcg
tccgaacacaactttgcctccgtcggcaaggacatccgattcggcctcggcgcggtgcgc
aacgtcgggtccaatgtggtcgcggcgatcatcgcgggccgccgcgaacacggcgcgttc
accgacttctccgactatctgaacaagatcgacgcactggcctgcaccaagaaggtggcc
gaatcactgatcaaggccggagccttcgactcgctggggcattcccgaaaaggtctgctg
ctggtgcattcggacgcgatcgacgcggtgatgtcgaccaagaaggccgaagcgatgggc
cagttcgacctgttcggtggggcggacgcggacgcggatgtcacctcggtgttcaacgtg
aaggtgcccgacgacgagtgggacagcaaacacaagctcgcgctggaacgagagatgctg
gggctgtacgtatccgggcatccgctcaacggtgtcgagcatattctcgccgcgcaggcc
gacacgcagatcccggcgattctggcgggtgacgtgccggatggcacccaggtgaccgtc
ggcggcatcctcgccgcggtgaaccggcggatcaacaagaacggcctggcgtgggcgtcg
gcccagatcgaggacctgaccggcgggatcgaggtgctgttcttcccgcaggcctattcg
gtgttcgggatggatgtcaccgaagatgcggtagtgctggtcaaggcccgggtgtcggtc
cgcgacgatcggatctcgctgatcgccaacgatctcgcggtcccggatttgtctcaggtc
ggggtggcgaagccgctcgcggtgagcatccagtcccggatgtgtaccccggacaaggtc
ggagcgttgaagcgggtcctggccagccaccccggcactgcggacgtgcacctgcggctg
gtgtcgggggagaagaccacgatgctcgagctcgatcggagcctgcgggtcaccccctcg
tcggcgctgatgggcgacctgaaagcgctgctgggaccgtcgtgcctggcgagttag
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integrated database retrieval system
