Skermania pinensis: KV203_07660
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Entry
KV203_07660 CDS
T07358
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
spin
Skermania pinensis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KV203_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spin03021
]
KV203_07660
Transcription machinery [BR:
spin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KV203_07660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QXQ15757
UniProt:
A0ABX8SD97
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Position
complement(1655591..1657078)
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AA seq
495 aa
AA seq
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MPDNGRCRLVSARPHQDLSAGRPAGVTPYDTVHERAYVVATNTRKAIDPEPVVPTEPAEN
GKRAPRKAAAKKAPAKRAAAKTAAPARKTATKAAKAATKRATKPAGTNDDPETAELADEA
VDLGDFEIADGDLATDGEGAADTEAVTEEAEDEEQVEEPTSADKASGDFVWDEEESEALR
QARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATEKMREYTERGEKL
PVAQRRDLQWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVE
KFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGRE
PTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSF
TLLQDQLASVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSK
LRHPSRSQVLRDYLD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaatggccggtgccggctcgtgtcggctcgaccccaccaagacctctccgcc
ggacgccccgccggcgtgacgccgtacgacaccgtccacgaaagggcgtacgtggtagcc
accaacacccgcaaggcgatcgatcccgaaccggttgtccccaccgaaccggcggagaac
ggtaagcgggcgccgcgcaaggcggcggcgaagaaggcgccggccaagcgcgctgctgcc
aaaaccgccgcgccggcccgcaagaccgcgacgaaggccgcgaaagcagcaaccaagcgt
gcaaccaagccggccggcaccaacgacgatccggaaaccgccgagctcgccgacgaagcc
gtcgacctcggcgacttcgagatcgccgacggcgaccttgccaccgacggtgagggcgcg
gccgacacggaggcggtcaccgaagaagccgaagacgaagagcaggtcgaagagccgacc
agcgccgacaaagcatccggcgacttcgtctgggacgaagaagaatccgaagctctgcgg
caggcacgcaaggatgcggagctgactgcatccgccgactcggtgcgcgcgtatctcaaa
cagatcggcaaggtagcgctgctcaatgccgaagaagaggtcgagctcgccaagcggatc
gaggccgggctctacgccaccgagaagatgcgcgagtacaccgagcgcggagaaaagctg
ccggtcgcccagcgtcgtgatctgcagtggatctgccgggacggcaaccgcgcgaagaac
cacctgctggaggccaacctgcgactggtcgtatccctggccaagcgctacaccggccgc
ggaatggcgttcctggatctgatccaggaaggcaacctgggcctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacctacgcgacctggtggatccggcag
gcgatcacccgggcgatggccgatcaggcccgcacgatccgcatcccggtacacatggtc
gaggtgatcaacaagctggggcggatccagcgcgagttgctccaggacctgggtcgcgag
ccgaccccggaagagctcgccaaggaaatggacatcaccccggagaaggtgctggagatc
cagcaatatgcccgggaaccgatctcgctggaccagaccatcggtgacgagggcgattct
cagctcggcgatttcatcgaggacagcgaagccgtcgtggcggtggacgcggtgagcttc
accctgctccaggaccagctggcgtcggtcctggaaaccttgtccgagcgggaggccggg
gtggttcggttgcgcttcggcctcaccgacggccaaccgcgcacgttggacgagatcggg
caggtgtacggcgtgacccgagagcggatccggcagatcgaatccaagacgatgtccaag
ctgcgacacccgtcgcggtcgcaggtactgcgcgactatctcgactga
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