Skermania piniformis: KV203_07760
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Entry
KV203_07760 CDS
T07358
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spin
Skermania piniformis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spin03016
]
KV203_07760
Enzymes [BR:
spin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KV203_07760
Transfer RNA biogenesis [BR:
spin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KV203_07760
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QXQ15210
LinkDB
All DBs
Position
complement(1673996..1675252)
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AA seq
418 aa
AA seq
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MSEFGATAGSADAPEPTPVPLLAAPVAGVPPVVDTADGVRKAADQLAAGTGPLAVDAERA
SGFRYSPRAYLIQLRRRDAGTVLIDPIPVAAELDPLIAVVNDLDWTLHAADQDLPGLADL
GLTPMRLYDTELAGRLAGFERVGLAAMVERLLGFGLAKGHGAADWSKRPLPDAWLNYAAL
DVELLPELRDAIAAELSAQGKTDWAAEEFEYIRTATRSTPRTDRWRRTSQIHTLRRPRQL
AVVRELWTTRDNLARNRDIAPGRILPDAAIVAAASVVPSTVDELRRLSVFGGPRQRRLSR
TWLDAIERARALPTEELPPASQPFDGPPPPNRWARRNPEAADRLTAARAAMTGLSEQVRI
PTENLLVPDLLRRLCWDGVRSGDLARAEAVDEYLRAGGARAWQRELVVPRLVAAFGSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttcggcgcgacggccggttcggccgacgcgccggaacccactccagttccg
ctgcttgccgctcccgtagcgggggtgccgccggtggtggataccgccgacggggtgcgc
aaggcggccgatcagctcgccgccggcaccggcccgctcgccgtggacgccgagcgggcc
tccggcttccgctactccccccgcgcttacctgatccagctgcggcgacgcgacgccgga
accgttctcatcgacccgatcccggtcgccgccgagctcgacccactgatcgccgtggtc
aacgacctggattggacgctccatgccgccgaccaggacctacccggcctggccgacctc
ggtctgaccccgatgcggctgtacgacaccgagctagccgggcggctggccggtttcgag
cgggtcgggctggccgcgatggtggagcgcctgttggggttcggtctggcgaaggggcac
ggcgctgccgactggtccaagcgcccgctgcccgacgcttggctgaactacgccgccctg
gacgtcgaactgctcccggagctccgggatgcgattgccgccgaactctcggcccagggt
aagaccgattgggcagcggaggagttcgagtacatccggaccgccacccgatcgacgccg
cggaccgaccggtggcgacgcacctcgcagatccatacgttgcgccggccgcggcaactg
gccgtcgtgcgcgagctctggacgacccgcgacaacctcgcccgcaaccgagacatcgcg
ccgggccggatactgccggacgccgcgatcgtcgcggcggcatccgtcgtcccgagcacc
gtcgacgagcttcggcgactgtcggtgttcggtgggccccggcagcgccggctctctcgc
acctggctcgatgccatcgagcgggcgcgggcgttgccgaccgaggaactaccgccggcc
agccaacctttcgacgggccgccaccgccgaaccgttgggcccggcgcaacccggaagcg
gcagatcgactgaccgccgcacgcgcggccatgaccgggttgagcgagcaggtccggatc
ccgaccgagaacctgctcgttcccgacctgctgcgccgactgtgctgggacggcgtccgg
tccggcgatctggcccgggccgaggccgtcgacgaatacttgcgggcaggcggggcccgg
gcatggcaacgagaactggtggtcccgcgcttggtggcggcattcggctcgagctga
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