Skermania pinensis: KV203_09660
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Entry
KV203_09660 CDS
T07358
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
spin
Skermania pinensis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spin03019
]
KV203_09660
Enzymes [BR:
spin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KV203_09660
Messenger RNA biogenesis [BR:
spin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KV203_09660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
QXQ15820
UniProt:
A0ABX8SD23
LinkDB
All DBs
Position
complement(2070265..2072937)
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AA seq
890 aa
AA seq
DB search
MTAFAAGLDFELDGFQERACAALADGRDVLVCAPTGAGKTVVGEFAVHLALAAGSTCFYT
TPIKALSNQKFADFVRRYGRDSVGLLTGDQSINPSAPVLVMTTEVLRNMIYAGSDTLRGL
SHVVMDEVHYLADRFRGAVWEEVILHLPADVRLISLSATVSNAEEFGAWLTTVRGDTAVV
LDEVRPVPLWQHVLVGRRLFDLFQTDDPTAATIVAADLVRYVKQREELEQANSWAPRRGR
PGPSAQRGRGYRPLPRPDVLALLDQEGLLPAITFVFSRQGCDAALAQCLRSRLDLAAPDS
AEQIDAVITAHTGELPRADLEVLGYWEWREALLRGIAAHHAGMLPAFRHTVEELFVRGLV
RAVFATETLALGINMPARTVVLERLVKFNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHAV
VLWQPELAVSEVAGLASTRTYPLRSSFRPSYNMAVNLVARVGTAAARELLERSFAQFQAD
RSVVGLVRGIDRNEARVAELRAQLADADGIVEYVGLRARIRDRERQLRRRDREDQRGAAA
TALSQLRRGDVVAVPAGRRAGLAVVLEPAGQPDDPRPLVLTAQRWAGRISIADAPVPIVP
IGRLRLPKHVDHRQPRTRRDLASALRETGLTVPRSTRRSRAGTDGDDELAALRRAVRAHP
AHTRPDREELARIGERYHRAMRETEHLREQVAATTDSLARTFDRILALLRERNYLNGDEI
TPAGRRLARIYTESDLVVAECLRRGLWRNLTAADLAAVVSVLVFESRTDDAHTLAEGPND
ATRQAVHGTVEVWSQLRADERRHHLPATREPDLGFVEPVHRWARGRPLVDVLAAGDARRP
LSAGDFVRWCRQVIDLLDQLPDATDDRQLAQTATAAIRAIRRGVVAIDAG
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcattcgcggccgggctcgacttcgagttggacggctttcaggagcgagcgtgc
gcggcgctggcggacggtcgcgacgtgttggtctgcgccccgaccggcgccggcaagacc
gtggtcggcgagttcgcggtgcatctggccctggccgccggcagcacctgcttctacacc
acgccgatcaaggcgttgagcaatcagaagttcgccgacttcgtccgccgctacggccgc
gacagcgtcggcctgctcaccggtgatcagtcgatcaatccgtccgcgccggtgctggtg
atgaccaccgaggtgctgcggaacatgatctacgccggcagcgacaccttgcgcgggctg
tcccatgtggtgatggacgaggtgcattacctggccgaccgattccggggtgcggtctgg
gaagaggtgatattgcacctgccggccgatgtccggctgatcagcctgtccgcgacggtg
agtaacgccgaggagttcggggcctggctgaccaccgttcgcggcgacaccgcggtcgtg
ctcgacgaggttcgtccggtcccgctgtggcaacacgtgctggtcggccggcgactgttc
gatctgttccagaccgacgatccgacggcagccacgatcgtggccgccgatctggtccgg
tacgtgaaacagcgcgaagagttggagcaggcgaactcgtgggcgccacgtcgcggacgg
cccggcccgtccgcgcaacgaggccgcggttaccgcccgctgccgcggccggacgtgctt
gccctgctcgaccaggagggtctgctgccggcgatcacgttcgtgttcagccggcagggc
tgcgatgctgccctcgcccagtgcctgcggtcccggctcgatctggctgcaccggactcg
gccgagcagatcgacgcggtgatcaccgcgcataccggcgagctaccccgcgccgatctc
gaggtgctgggctactgggagtggcgggaggcactgctccggggaatcgccgcgcatcac
gccgggatgttgccggcgttccggcacacggtcgaagaactgttcgtccgcggcctggtg
cgggcggtgttcgccaccgagacgctggcgttgggaatcaacatgccggcgcggacggtg
gtgttggaacggctggtgaagttcaacggggaggcccacgtcgacctcacgccgggcgag
tacacccagctgaccgggcgggccgggcggcgcggaatcgacgtcgaggggcatgcggtg
gtgctctggcagccggaactcgcggtgtcggaggtcgcgggattggcctccacccgcacc
tacccgttgcgcagctcgtttcggcccagctacaacatggcggtcaacctggtcgcgcgg
gtcggaaccgcggctgcgcgggaactgctggaacgctcgttcgcacagttccaggccgac
cgctcggtggtcggcctggtccgcgggatcgaccggaacgaagcccgggtcgcggagttg
cgcgctcagctcgccgatgcggacggcatcgtcgagtatgtcggtctgcgagcccgaatt
cgggaccgggagcggcagctgcgccgccgcgaccgggaagaccagcgtggggcagcagcc
accgcgctgtcgcagctgcggcgcggcgacgtggtggccgttccggcgggccggcgggcc
gggctggccgtcgtcctggaaccggcgggacagccggacgatccgcggccgctggtgctg
accgcacagcgctgggccgggcggatctcgatcgccgacgcgccggtgccgatcgtgccg
atcggccggctgcggttgcccaaacatgtcgatcaccggcagccgcggacccgccgggat
ctggcgtccgccttgcgcgagaccggattgacggtgccgcggtcgacccggcgaagccgg
gccggcaccgatggcgacgacgagttggccgcactgcgccgcgccgtccgcgctcacccg
gcccacacccggccggaccgggaagaactcgcccggatcggcgagcggtatcaccgggcg
atgcgggagaccgagcacctgcgcgagcaggtggcggcgacgacggattcgctcgcgcgg
acgttcgatcgcatcctggcgctgctgcgcgagcgaaactatctcaacggcgacgagatc
acgcccgccggtcgccgactggcccggatctacaccgaaagcgacctggtggtcgccgaa
tgcctgcgccgaggactgtggcgcaacctcaccgcggccgacctggccgcggtggtatcg
gtgttggttttcgagtcccggaccgacgacgcgcacaccctggcggaaggaccgaacgac
gcgacccgccaggccgtgcacggcaccgttgaggtctggtcgcaactccgtgccgacgag
cgccgccaccacctacccgccacccgggaaccggatctgggttttgtcgaaccggtgcac
cggtgggcgcggggtcggccgctggtcgacgtgttggccgccggtgacgcgcgccggccc
ctgtcggcgggcgacttcgtccggtggtgtcggcaggtgatcgacctgctcgaccagctg
ccggacgcgaccgacgaccggcagttggcgcagacggcgaccgcggcgatccgggcgatt
cggcgcggtgtggtggcgatcgacgccgggtag
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