KEGG   Skermania piniformis: KV203_11275
Entry
KV203_11275       CDS       T07358                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
spin  Skermania piniformis
Pathway
spin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KV203_11275 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spin03400]
    KV203_11275 (uvrA)
DNA repair and recombination proteins [BR:spin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KV203_11275 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KV203_11275 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 SMC_N AAA_21 RsgA_GTPase nSTAND1 AAA_25 AAA_16 AAA_22 ScfRs NACHT DnaJ_CXXCXGXG Viral_helicase1 ExoX-like_C cobW CCDC24 NTPase_1
Other DBs
NCBI-ProteinID: QXQ12553
LinkDB
Position
complement(2419146..2422187)
AA seq 1013 aa
MACRLPSVRALRSAAAYTCRWPDIAWRARSGPREISGKGRSVAGQRNGRGTGRRQPAGQR
LIVRGAREHNLRSVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQ
FLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCPVC
GEQIAKQTPQQIVDQVLAMPDGTKFQVLAPVVRTRKGEFVDLFEQLNAQGYARVRVDGVV
HQLTDPPKLRKQEKHDIEVVVDRLTVKASAKQRLTDSVETALRLADGVVVLDFVDRAETG
DASDTDAADRERRFSERLACPNAHPLDIDDLEPRSFSFNSPYGACPECAGLGIRKEVDPD
LVVPDPQLSLAEGAIAPWSGGHNAEYFGRLLAGLADVLGFSMDTSWQRLPAKARKAILEG
SPDQVHVKYRNRYGRVRSYYADFEGVLPFLQRRMESTESEQMKERYDGYLRDVPCPACHG
ARLRPEILAVTIAAGERRFSIAEVAELSIAECADFLNQLTLGAREEAIAGQVLKEVQARL
GFLLDVGLEYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRL
IETLTRLRDLGNTLIVVEHDEDTIRASDWVVDIGPLAGEHGGRVVHSGPYRELLTEPTSL
TGAYLAGRSTIPVPAVRRTISKKRQITVVGAREHNLRDIDVAFPLGVLTAVTGVSGSGKS
TLVNDILATVMANKLNGARQVPGRHTRVNGLDQLDKLVQVDQSPIGRTPRSNPATYTGVF
DKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHG
ARYNRETLDVHYKGKTIAEVLDLPIEEAAEFFRPVTSIHRYLATLVDVGLGYVRLGQPAP
TLSGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLGVVNGLVDKGNTVIVI
EHNLDVIKTSDWVIDMGPEGGSGGGTVVGQGTPEQIADMTESYTGEFLRSVLD
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggcgtgcaggctaccgtcggtccgggcgctccggtcggcggcggcgtacacctgtcgg
tggccggacatagcatggcgagcgagatcaggacctcgagaaatcagcgggaagggacgg
tcggtggcaggacagcggaacggccgcggaaccggcagacgacaaccggcgggccagcgg
ctgatcgtgcgtggcgcgcgagaacacaacctgcgcagcgtcgatctggacctgccccgg
gacagcctgattgtgttcaccgggctgtccggatcgggcaagtccagtcttgcattcgac
acgatcttcgccgaggggcagcgccgttatgtcgagtcgctgtcggcatatgcgcggcag
tttctcggccagatggacaagccggatgtcgacttcatcgagggcctgtccccagcggtg
tcgatcgatcagaagtcgaccaatcgcaatccccgttcgacggtcggcacgatcaccgag
gtctacgactatctccggttgctctatgcccgggcgggtacgccgcattgtccggtatgt
ggcgagcagatcgccaagcagacgccacagcagatcgtcgatcaggtgctggcgatgccg
gacggcaccaagttccaggtgctggcgccggtcgtgcgtacccgcaagggcgagttcgtc
gatctgttcgagcagctcaacgcgcagggctatgcccgggttcgggtcgacggggtggtg
catcagctgaccgacccgccgaagctgcgtaagcaggagaagcacgatatcgaggtggtg
gtcgaccggctgaccgtgaaagcgagcgccaagcagcggctcaccgattcggtggagacg
gcgctgcggctcgccgacggcgtggtcgtgctcgatttcgtcgaccgggccgagacgggt
gacgcgtcggatacggacgcggccgaccgggaacgccgcttctccgagcgtctggcgtgt
ccgaacgcgcatccgctggacatcgatgatctggaaccgcggtcgttttcgttcaattcg
ccgtacggcgcctgcccggagtgcgccggactgggtatccgcaaggaggtcgatccggac
ctggtggtgccggatccgcagctcagtctggccgagggcgcgattgcgccgtggtcgggc
gggcacaatgcggagtatttcggccggctgctggccggcctcgccgatgtcctcggcttt
tcgatggatacgtcgtggcagcggctgccggcgaaggcgcgcaaggcgattctggagggc
agccccgaccaggtacacgtcaagtatcgcaaccggtacggccgggtccgctcgtactac
gccgacttcgagggagtgctgccgttcctgcagcgccggatggagtcgaccgaatccgag
cagatgaaggagcgatacgacggctatctgcgggacgtgccgtgcccggcatgccatggt
gcccgactgcggcccgagatcctggctgtgacgatcgccgcgggggagcgtcgcttctcc
atcgccgaggttgccgagctgtccattgccgagtgcgccgacttcttgaaccagctcacg
ctcggcgcccgggaggaggcgatcgccggtcaggtgctcaaggaggtgcaggctcggctc
ggtttcctgctggacgtggggctggaatatctgtcgttgtcccgtgcggccggcacgctc
tccggtggtgaggcgcagcgaatccggctggccacccagatcgggtccggtttggtcggg
gtgctgtacgtgctcgacgagccgtcgatcgggctgcaccagcgggacaaccggcggctg
atcgagaccctcacccgactgcgcgacctgggcaacacgctgatcgtggtcgagcacgac
gaggacaccattcgcgcctcggactgggtggtcgatatcggtccgctggccggcgagcac
ggtggccgggtagtgcacagcggtccctaccgggagctgctcaccgagccgacgtcgctc
accggcgcctatctggccgggcgctcgaccatcccggtgccggcggtgcggcggacgatc
agcaagaagcggcagatcaccgtggtcggtgcgcgcgagcacaacctgcgcgacatcgat
gtggcctttccgctcggcgtgttgaccgcggtcaccggagtgtccggatcgggcaagtcg
acgctggtcaacgacatcctcgccacggtgatggcgaacaagctgaacggggcgcggcag
gtgcccgggcggcatacccgggtgaacgggctggaccagttggacaagttggttcaggtg
gaccaatcgccgatcggtcgtaccccgcgctccaatccggccacctacacgggggtgttc
gacaagattcgcaccctcttcgcggcgaccaccgaggcgaaggtacgtggctaccagccc
ggccgattctcgttcaacgtcaaaggcggtcgctgcgaggcgtgttcgggtgacggcacg
ttgaagatcgagatgaacttcctgccggacgtgtacgtcccgtgcgaggtgtgccacggc
gcccgatacaaccgggaaacgctcgacgtgcactacaaggggaaaaccatcgccgaagtg
ctggatctgccgatcgaggaagcggcggagttcttccggccggtcacctcgatccaccgg
tatctggcgacactggtcgatgtcgggctcggctacgtccggttggggcagccggcaccg
acgttgtccggcggtgaggcgcaacgggtcaagctggctgccgagttgcagaagcgttcg
accggtcgcaccgtctacatcctcgacgagccgaccaccggcctgcatttcgaggacatc
cgcaaactgttgggggtggtgaacggactggtggacaaggggaacaccgtgatcgtgatc
gaacacaatctggatgtgatcaagacatccgactgggtgatcgacatgggtccggagggt
ggttcgggcggcggcacagtggtcggacaggggaccccggagcagatcgcagacatgacg
gagagctacaccggcgagttcctgcggagcgtgctggactga

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